CX672515

Overview
NameCX672515
Unique NameCX672515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.540e-81
Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = -2
Query:  221 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 664
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNG ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYE+TARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.011e-81
Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = -2
Query:  221 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 664
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNG ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYE TARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.430e-81
Identity = 141/148 (95.27%), Postives = 146/148 (98.65%), Query Frame = -2
Query:  221 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 664
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNG ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYEATAR+WTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.430e-81
Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = -2
Query:  221 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 664
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNG ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+DK KYE+TARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.851e-81
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = -2
Query:  221 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 664
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNG ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+DK KYE+TAR+WTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 8.449e-80
Identity = 136/148 (91.89%), Postives = 147/148 (99.32%), Query Frame = -2
Query:  221 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 664
            MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNG ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D++KYE+TARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.154e-75
Identity = 129/148 (87.16%), Postives = 140/148 (94.59%), Query Frame = -2
Query:  221 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG 664
            MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNG ICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+YK+D+ KYE+TA+SWTQKYAMG
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 8.184e-75
Identity = 128/147 (87.07%), Postives = 138/147 (93.88%), Query Frame = -2
Query:  224 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 664
            MA++RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP +SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YK+DK KYEA ARSWTQKYA+
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.710e-69
Identity = 114/146 (78.08%), Postives = 135/146 (92.47%), Query Frame = -2
Query:  224 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 661
            +SKRI KEL DL++DPPTSCSAGPV +D++HWQA+IMGP DSPYAGGVF ++IHFP DYPFKPPK++F TK++HPNIN+NG ICLDILK+QWSPALT+SKVLLSICSLLTD NPDDPLVPEIAH+YK+D+ KYEATAR WT+KYA+
Sbjct:    3 SSKRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYAV 148          
BLAST of CX672515 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.952e-68
Identity = 116/147 (78.91%), Postives = 134/147 (91.16%), Query Frame = -2
Query:  224 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGRICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAM 664
            MA KRI KEL DL +DPP+SCSAGPV ED+FHWQATIMGP DSPY+GGVF + IHFP DYPFKPPKV F T+++HPNINSNG ICLDIL++QWSPALTISKVLLSICS+LTDPNPD+PLVPEIAH+YK+D+A+YEATAR WT+KYA+
Sbjct:    1 MAFKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAREWTRKYAI 147          
The following BLAST results are available for this feature:
BLAST of CX672515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
UBC28_ARATH1.540e-8195.27Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC4_SOLLC2.011e-8195.95Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC8_ARATH3.430e-8195.27Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC10_ARATH3.430e-8195.95Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC9_ARATH5.851e-8195.27SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC11_ARATH8.449e-8091.89Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH2.154e-7587.16Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH8.184e-7587.07Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC4_YEAST6.710e-6978.08Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces... [more]
UBC1_COLGL1.952e-6878.91Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17D12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17D12-G23-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672515 ID=CX672515; Name=CX672515; organism=Citrus sinensis; type=EST; length=815bp
TTTTTTAGGACAACAAACTACATTGAATGATAGGAGTTTCAAACAATAAA
CATTCAACATTAACAAAATCGTCTTGCCCTTGCAACTCCTCCCCAAACAT
CCTTCCTCATTACTAAAATACAAAACATCCCCTTCCCGAAGCAAGATTGA
AGAAAAAGGAGAAAAAAACACAACATATTTCATATAAATGAGTTCCATTT
CTGCAATATCCAAACAACTATCCCATGGCATACTTCTGTGTCCAGCTCCT
GGCAGTGGCTTCATATTTGGCCTTGTCGGACTTGTACATGTGAGCAATCT
CCGGTACAAGCGGGTCGTCAGGATTTGGGTCAGTAAGCAACGAGCAGATA
GAAAGCAGGACCTTTGAAATGGTAAGAGCTGGGCTCCACTGTTCTTTAAG
GATATCAAGACATATTCTTCCATTGCTGTTGATGTTTGGGTGGAAGACCT
TGGTCCTAAAAGCAACCTTTGGGGGCTTGAAGGGATAATCTGGAGGAAAA
TGAATGGTAACCAAAAATACACCTCCTGCATATGGACTATCAGGGGGGCC
CATAATTGTTGCTTGCCAATGGAACATGTCTTCAGCCACCGGACCAGCGC
TGCAAGACGTGGGAGGATCCTTCTGCAAATCCTTGAGTTCCTTCAAAATA
CGCTTCGAAGCCATGATGCTTCAACGGATTATTAAAAGTTAAAGCCACAA
CAAACCTAGGATCTTGTGCGGCGAAGAAGGAGATCGGAGGGCAATAGCAG
TGAGAAAGGGGAACGGCTTCGGAGCAGATCTGCGGCGGCTACTGGCCGTC
CCGACCTCTCTCCCT
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