CX672510

Overview
NameCX672510
Unique NameCX672510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 6.664e-109
Identity = 193/223 (86.55%), Postives = 201/223 (90.13%), Query Frame = 2
Query:   29 MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSISGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEKPVT 697
            MAKPV IEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICT+KKTILSVEDI+ALIGDKCDGVIGQLTEDWGE LF+ALS +GGKAFSNMAVGYNNVDVNAANKYG+AVGNTPGV                 RRIVEADEFMRAG YDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY+DLYQ+TRLEKFVTAYG+FLKANGE PVT
Sbjct:    1 MAKPVQIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTEKKTILSVEDILALIGDKCDGVIGQLTEDWGEVLFSALSRAGGKAFSNMAVGYNNVDVNAANKYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGRYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGEFLKANGEAPVT 223          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  290 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA 655
            K  +  AVGY+N+D+  A K GI V NTPGV                 RRIVEAD F+R+G +     GW P +F+G  LKG+T+G++G GRIG A A+   +GF M +IYY   +    E+ + A
Sbjct:   69 KIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAK-RAKGFGMKIIYYSRTRKPEAEEEIGA 193          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 53/144 (36.81%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  215 CDGVIGQLTEDWGETLFAALSISGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD-GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK 643
            CD ++  LT+     +F A      +  +  AVGY+N+DV  A K GI V NTPGV                 RR+VEAD ++R G +   W P + +G  + G+T+G++G GRIG+A AR   +GF M ++YYD  +    EK
Sbjct:   46 CDALVSLLTDPIDAEVFEAAPKL--RIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVAR-RAKGFGMRILYYDSIRREDFEK 186          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 62/195 (31.79%), Postives = 103/195 (52.82%), Query Frame = 2
Query:   71 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSISGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK 643
            K +V  T+ +P    IN+L E++  VE+  +++ I   E ++  + D  D ++  L+E   + +F   +    +  +N AVGY+N+DV  A + GI V NTP V                 R +V+ D+F+R+G +      W P  F+G  L G+T+G++G GRIG A AR   +GF M ++YY   + ++ EK
Sbjct:    2 KPKVFITRAIP-ENGINML-EEEFEVEVWEEEREIPR-EKLLEKVKD-VDALVTMLSERIDQEVFE--NAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIAR-RAKGFNMRILYYSRTRKSQAEK 189          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16
Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = 2
Query:   71 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDW-GETLFAALSISGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDG-WLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFV 649
            K  V    P PG      ++++ C V +   K    S E+++  I DK D ++  LT+    E + AA ++   K  S  +VG++++D+  A K GI V +TPGV                 RRIVEAD+ +R G +D  W P    G  LKG+T+G++G GRIG A A+ +   F + ++YYD+ +   +E  +
Sbjct:    5 KVYVTRIIPEPGLS----MLKECCDVVVHESKDWPPSREELLRNIRDK-DALLCLLTDKIDAEVMDAAPNL---KVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRL-SSFDVKILYYDIERRWDVETVI 190          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 2
Query:  299 SNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA 655
            +N AVGY+NVDV  A + GI V NTP V                 RR++EAD F R+G +      W P +F+G+ + G+T+G+IG GRIG A AR   +GF M ++YY   +    E+ + A
Sbjct:   72 ANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVAR-RAKGFGMRILYYSRTRKPEAEEELKA 193          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 57/181 (31.49%), Postives = 91/181 (50.28%), Query Frame = 2
Query:  125 LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSISGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA 655
            ++E++  VE+   ++ I   E ++  + D  D ++  L+E     +F        +  +N AVGY+N+DV  A K GI V NTPGV                 R +V+ D+F R+G +      W P  F+G  + G+T+G+IG GRIG A A+    GF M ++YY   +   +EK + A
Sbjct:   19 MLEKEFEVEVWEDEREIPR-EILLEKVKD-VDALVTMLSERIDREVFERAPRL--RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAK-RARGFDMRILYYSRTRKPEVEKELNA 194          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 62/195 (31.79%), Postives = 100/195 (51.28%), Query Frame = 2
Query:   71 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSISGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK 643
            K +V+ T+ +P    I +L E    VE+   +  I S E ++  + D  D ++  L+E     +F A      K  +N AVGY+N+D+  A K G+ + NTP V                 RR++EAD+F+R+G +      W P +F+G  + G+T+G++G GRIG A AR   +GF M ++Y    +   +EK
Sbjct:    2 KPKVLITRKIP-ENGIKMLREH-FEVEVWEDEHEI-SREVLLEKVRD-VDALVTMLSERIDAEVFDAAPRL--KIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIAR-RAKGFGMRILYNSRTRKPEVEK 189          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 54/181 (29.83%), Postives = 91/181 (50.28%), Query Frame = 2
Query:  125 LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSISGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA 655
            ++E +  VE+   +K I    +I+     + D ++  L+E   + +F   +    +  +N AVGY+N+D+  A K GI V NTP V                 R +V+ D F+R+G +      W P  F+G  + G+T+G+IG GRIG A A+   +GF M ++YY   +   +E+ + A
Sbjct:   18 MLEDEFEVEVWGDEKEI--PREILLKKVKEVDALVTMLSERIDKEVFE--NAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAK-RAKGFNMRILYYSRTRKEEVERELNA 193          
BLAST of CX672510 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 47/119 (39.50%), Postives = 67/119 (56.30%), Query Frame = 2
Query:  299 SNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAG----LYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK 643
            + MAVG++N+DV  A + GI V NTPGV                 RR+VEAD F+R G    L  GW P + +G  L+G+T+G++G GRIGS  A  + + F M +IY+   +   +EK
Sbjct:   73 AQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAE-IGKAFGMRIIYHSRSRKREIEK 190          
The following BLAST results are available for this feature:
BLAST of CX672510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DHGY_CUCSA6.664e-10986.55Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
GYAR_THELI5.417e-1841.27Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_KORCO1.207e-1736.81Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_PYRFU4.585e-1731.79Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THEPD1.742e-1632.31Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_THEGJ1.129e-1539.02Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRAB1.129e-1531.49Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEON1.475e-1531.79Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRHO1.475e-1529.83Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_AERPE1.475e-1539.50Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17D08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17D08-G15-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672510 ID=CX672510; Name=CX672510; organism=Citrus sinensis; type=EST; length=697bp
GGAACTTGAAACTGCCAACTTAGCTTCAATGGCGAAGCCAGTTTCAATTG
AAGTGTGGAACCCAAATGGAAAATACAGAGTTGTTAGTACCAAGCCTATG
CCTGGAACCCGCTGGATCAATCTCTTAATCGAACAAGATTGCCGTGTTGA
AATATGCACCCAGAAGAAAACTATACTCTCTGTTGAAGATATCATTGCTT
TGATTGGTGACAAGTGCGATGGAGTCATTGGACAGTTGACAGAGGACTGG
GGAGAGACTTTGTTTGCTGCACTGAGTATATCAGGAGGAAAGGCTTTTAG
TAACATGGCTGTTGGTTACAACAATGTTGACGTTAATGCTGCTAACAAAT
ATGGTATTGCTGTTGGAAACACTCCTGGAGTACTTACTGAAACAACAGCA
GAGTTAGCAGCTTCGCTCTCTCTAGCGGCTGCAAGAAGAATTGTTGAAGC
AGATGAGTTTATGAGAGCTGGCTTATACGATGGATGGCTTCCAAATCTAT
TCGTCGGGAACTTGCTCAAGGGACAGACTGTCGGTGTGATTGGAGCTGGT
CGTATCGGATCTGCCTATGCTAGAATGATGGTTGAAGGGTTCAAAATGAA
CCTCATTTACTATGATCTTTACCAAGCTACACGCTTGGAAAAGTTTGTCA
CAGCTTATGGTCAGTTTCTAAAAGCCAATGGTGAAAAACCTGTCACT
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