CX672509

Overview
NameCX672509
Unique NameCX672509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.473e-76
Identity = 134/157 (85.35%), Postives = 149/157 (94.90%), Query Frame = -1
Query:  221 WKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLNENAQPPAASPSIVNSKALG 691
            W+RASSMDEVLREADVISLHPVLDKTT+HL+NKE L  MKK+AIL+NCSRGPVIDE ALV+HL+ NPMFRVGLDVFEDEPYMKPGL++MKNAI+VPHIASASKWTREGMATLAALNVLGKIKGYP+W +PN+VEPFL+EN  PPAASPSIVN+KALG
Sbjct:  224 WRRASSMDEVLREADVISLHPVLDKTTFHLVNKESLKAMKKDAILINCSRGPVIDEAALVDHLRDNPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWTREGMATLAALNVLGKIKGYPVWSDPNRVEPFLDENVSPPAASPSIVNAKALG 380          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24
Identity = 56/116 (48.28%), Postives = 77/116 (66.38%), Query Frame = -1
Query:  323 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 670
            + +L+E+D ISLH  L K TYH+I ++ L  MK  AIL+N SRG V+D  AL++ LK+  +   GLDVFE+EPY    L ++KN ++ PHI SA+   REGMA L A N++   KG
Sbjct:  199 ETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKLKNVVLAPHIGSATHEAREGMAELVAKNLIAFAKG 314          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = -1
Query:  323 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 673
            ++++LRE+D + L   L + TYHLIN+ERL  MKK AIL+N +RG V+D  ALV+ LK+  +   GLDVFE+EPY    L ++ N ++ PHI SAS   REGMA L A N++   +G
Sbjct:  198 LEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRG 314          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 56/117 (47.86%), Postives = 79/117 (67.52%), Query Frame = -1
Query:  323 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 673
            +DE+LRE+D + L   L+K TYH+IN+ERL  MK+ AIL+N +RG VID  AL++ LK+  +   GLDV+E+EPY    L  + N ++ PHI SA+   REGMA L A N++   +G
Sbjct:  199 LDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDNVVLTPHIGSATFGAREGMAKLVAENLIAFKRG 315          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.498e-23
Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = -1
Query:  323 SSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPG--LSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 679
            + +D +L ++D++S+H  L K TYHLIN+ERL  MKK A L+N +RGPV+D  ALV+ LK+  +    LDVFE EP + P   L++  N ++ PHIASA+   R+ MA LAA N++  +KG
Sbjct:  196 TDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEP-LPPNHPLTKFDNVVLAPHIASATIEARQRMAELAARNLIAVLKG 315          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23
Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = -1
Query:  338 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 673
            +DE+L+E+D + L   L K TYH+IN+ERL  MK  AILVN +RG V+D  ALV+ L++  +   GLDVFE+EPY    L  + N ++ PHI SA+   REGMA L A N++
Sbjct:  198 LDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSLDNVVLAPHIGSATYGAREGMAELVARNLI 309          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22
Identity = 54/113 (47.79%), Postives = 77/113 (68.14%), Query Frame = -1
Query:  338 SMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 676
            S++++LRE+D + L   L K T ++IN+ERL  MKK AILVN +RG V+D  AL++ LK+  +   GLDV+E+EPY    L  +KN ++ PHI SA+   REGMA L A N++
Sbjct:  197 SLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSLKNVVLAPHIGSATYGAREGMAELVARNLI 309          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21
Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = -1
Query:  338 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVL 673
            ++E+L+E+D + L   L K TYH+I +  L  MK  AILVN +RG V+D  AL++ LK+  +   GLDVFE+EPY    L  +KN I+ PHI SA+   REGMA L A N++
Sbjct:  198 LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVILAPHIGSATFGAREGMAELVARNLI 309          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.778e-21
Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = -1
Query:  323 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 673
            ++EVL+E+D + L   L K T ++IN+ERL  MK  AILVN +RG V+D  AL++ LK+  +   GLDVFE+EPY    L  + N ++ PHI SA+   RE MA L A N++   +G
Sbjct:  198 LEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSLDNVVLTPHIGSATFEAREAMAELVARNLIAFKRG 314          
BLAST of CX672509 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = -1
Query:  323 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 685
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
The following BLAST results are available for this feature:
BLAST of CX672509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
DHGY_CUCSA1.473e-7685.35Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
GYAR_THELI6.495e-2448.28Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_PYRHO8.483e-2448.72Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_PYRAB8.483e-2447.86Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEPD5.498e-2347.11Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_THEON9.379e-2349.11Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRKO2.089e-2247.79Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEGJ1.354e-2147.32Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRFU8.778e-2145.30Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GHRB_YERPS2.554e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17D08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17D08-G15-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672509 ID=CX672509; Name=CX672509; organism=Citrus sinensis; type=EST; length=691bp
TTTTTTTAAGATACAGCATAAAATGTGAAATTATGAAGCCAGTCAATACA
ACACAACTGCGCGAAAGCACGTACGTACATGGTTGTTAATGCTTCTCATA
ATGAAAATTTTGAACACTCACATCAAATTACACTTCAAACTTAGTAAGGT
GCTCTCTATGCACACCATTAGGCTCCAATGTGGTGAAGCTTCCGAGAGCT
TAAAGCCTTGAAACCGGCAAACCCAATGCCTTTGAGTTCACAATACTTGG
ACTTGCAGCAGGAGGCTGAGCATTCTCGTTCAAGAATGGTTCTACTTGAT
TTGGGTTACCCCATATGGGGTATCCTTTGATCTTTCCCAGGACATTCAGA
GCAGCAAGGGTTGCCATTCCTTCACGAGTCCACTTGGACGCGGAAGCAAT
GTGAGGTACCACGATGGCGTTCTTCATTTCAGAGAGTCCAGGCTTCATGT
AAGGCTCATCCTCAAAGACATCAAGACCAACACGAAACATTGGATTTTGT
TTCAAATGCTCCACCAGAGCTACTTCATCAATCACGGGACCCCTACTGCA
GTTGACAAGAATCGCTTCCTTCTTCATCGTTGCAAGCCTTTCTTTGTTGA
TCAAATGGTAAGTGGTTTTATCCAAGACTGGATGAAGACTTATCACATCT
GCTTCTCGAAGCACCTCATCCATGGACGAGGCTCTTTTCCA
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