CX672506

Overview
NameCX672506
Unique NameCX672506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_DEHSC (Guanylate kinase OS=Dehalococcoides sp. (strain CBDB1) GN=gmk PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.861e-28
Identity = 54/119 (45.38%), Postives = 91/119 (76.47%), Query Frame = 3
Query:  396 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 752
            PL++++SGPSGVGKD V+ +++E +  L ++VT T+RP R  E  G DY F+   EF +++ +NELLE+A VYG++ G+PK  IR+ +++G D++++VD+QGA ++++I+  +AVF+FL
Sbjct:   13 PLLLIVSGPSGVGKDAVLARMKERKLPLTYIVTTTTRPKRETETEGVDYNFIRPAEFQELISQNELLEWANVYGNFYGVPKAPIRQALSRGSDVIVKVDVQGAASIKKIV-PNAVFIFL 130          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_DEHE1 (Guanylate kinase OS=Dehalococcoides ethenogenes (strain 195) GN=gmk PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.861e-28
Identity = 56/119 (47.06%), Postives = 90/119 (75.63%), Query Frame = 3
Query:  396 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 752
            PL++V+SGPSGVGKD V+ +++E +  L ++VT T+R  R  E  G DY F+   EF Q++ +NELLE+A VYG++ G+PK  IR+ +A G+D++++VD+QGA ++++I+  +AVF+FL
Sbjct:   13 PLLLVVSGPSGVGKDAVLARMKERKLPLAYIVTTTTRTKREKETEGVDYNFIRPAEFQQLIGQNELLEWANVYGNFYGVPKAPIRQALAHGFDVIVKVDVQGAASIKKIV-PNAVFIFL 130          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_CLOD6 (Guanylate kinase OS=Clostridium difficile (strain 630) GN=gmk PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.868e-25
Identity = 53/122 (43.44%), Postives = 86/122 (70.49%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            L++V+SGPSG GK T+ K+L +  D++   V+AT+R  R GEV+G +YFF+SKE+F +M++K E LEYA +Y ++ G PK  I E + KG D++L +++QGA+ ++ +  +  VF+F+   S
Sbjct:    7 LLLVVSGPSGAGKGTICKELLKENDTIKLSVSATTRKPRTGEVDGVNYFFISKEKFEEMIEKGEFLEYAQIYDNFYGTPKAAIMECLEKGQDVLLEIEMQGAKQIKEVCPE-GVFIFVLPPS 127          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_CARHZ (Guanylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gmk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.524e-24
Identity = 49/122 (40.16%), Postives = 87/122 (71.31%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            +++V+SGPSG GK T+ +++R+   +L + ++AT+R  R GE++G  Y+F+ +++F +M+  +E LE+A VYG+Y G PKK + E +A+G D++L +DI+GAR +++   +  VFVF+   S
Sbjct:    5 MLVVVSGPSGAGKGTICQEIRKRNPNLFYSISATTREKRVGEIDGVHYYFIDRQQFEKMIANDEFLEWADVYGNYYGTPKKPVFEALARGQDVILEIDIKGARQVKKTYPE-GVFVFILPPS 125          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_CLOTE (Guanylate kinase OS=Clostridium tetani GN=gmk PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.010e-24
Identity = 56/122 (45.90%), Postives = 83/122 (68.03%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            L+IVISGPSG GK TV K+L  + ++  F V++T+R  R GE+ GK Y+F+SKEEF   + +N+ LEYA VYG+Y G PK ++ E + KG D++L +DIQGA  ++    +  +F+F+   S
Sbjct:    5 LLIVISGPSGTGKGTVCKELLRN-NNFWFSVSSTTRDPREGEIQGKSYYFMSKEEFEDKIKENDFLEYAKVYGNYYGTPKSKVIEMLDKGKDVILEIDIQGALQVKENYKE-GIFIFILPPS 124          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_SYMTH (Guanylate kinase OS=Symbiobacterium thermophilum GN=gmk PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.850e-24
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 3
Query:  390 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            P  L+IV++GPS VGK T+ + L      + F V+ T+RP RPGEV+G +Y+F+SKEEF + +   E LE+A VYG+Y G P+  + E  A+G D++L +D  GAR +R    D AV VF+   S
Sbjct:    5 PKGLLIVVTGPSAVGKGTICRALLAETPGIRFSVSCTTRPKRPGEVDGVEYYFISKEEFERRIAAGEFLEWAEVYGNYYGTPRGYVEEVTAQGQDVILDIDRVGARAVREQYPD-AVSVFVIPPS 128          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_GLOVI (Guanylate kinase OS=Gloeobacter violaceus GN=gmk PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.749e-23
Identity = 56/129 (43.41%), Postives = 87/129 (67.44%), Query Frame = 3
Query:  384 PPPNPL--IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            P  +PL  ++V+SGPSGVGKDT+++++RE    L+  V+AT+RP RPGEV+G+DY F+S  EF + +  ++LLE+A   G+Y G PK  + E +A G  +VL +D+QGA  ++     +A+ VF+   S
Sbjct:   11 PAGHPLSRLLVLSGPSGVGKDTILREVRERHPGLYVSVSATTRPPRPGEVDGRDYRFLSAAEFEEWIATDDLLEWACYVGNYYGTPKTPVLERLAVGEPVVLEIDVQGALQVKNNF-PAAMLVFIRPPS 138          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_LACS1 (Guanylate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=gmk PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.284e-23
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKL-RESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 752
            ++IV+SGPSGVGK TV K++  +  +  H+ V+ T+R MRPGEVNGKDY+FVSKEEF Q +   ++LEYA    +Y G P K + E +  G D+ L ++++GA  +R    D  +F+FL
Sbjct:    6 MLIVLSGPSGVGKGTVRKEIFSQPGNKFHYSVSMTTREMRPGEVNGKDYYFVSKEEFEQEIAAGQMLEYAQYVDNYYGTPLKYVNEMLDSGKDVFLEIEVKGAMQVREKAPD-GLFIFL 123          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_LACPL (Guanylate kinase OS=Lactobacillus plantarum GN=gmk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.896e-23
Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRDS-LHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 752
            ++IV+SGPSGVGK TV K++ +S D+   + V+ T+R MRPGEV+GKDY+FVSKEEF   +    +LEYA    +Y G P K I++ +A G D+ L +++ GA  +R  + D  VF+FL
Sbjct:    6 MLIVLSGPSGVGKGTVRKEIFDSDDNDFQYSVSMTTRQMRPGEVDGKDYYFVSKEEFEDEIKSGGMLEYAKYVDNYYGTPLKYIKQSLAAGKDVFLEIEVNGAMQVREKMPD-GVFIFL 123          
BLAST of CX672506 vs. ExPASy Swiss-Prot
Match: KGUA_GEOKA (Guanylate kinase OS=Geobacillus kaustophilus GN=gmk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.896e-23
Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 3
Query:  399 LIIVISGPSGVGKDTVIKKLRESRD-SLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 764
            L+IV+SGPSGVGK TV K L    D +LH+ V+ T+R  R GEV G DYFF ++E+F QM+ +N+LLE+A   G+Y G P   + + +A+G D+ L +++QGA  +RR   + A+F+FLA  S
Sbjct:    7 LLIVMSGPSGVGKGTVRKALFSQPDINLHYSVSVTTRKPREGEVEGVDYFFRTREQFEQMIRENKLLEWAEYVGNYYGTPIDYVEKTLAEGKDVFLEIEVQGAMKVRRAFPE-ALFIFLAPPS 128          
The following BLAST results are available for this feature:
BLAST of CX672506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 328
Match NameE-valueIdentityDescription
KGUA_DEHSC6.861e-2845.38Guanylate kinase OS=Dehalococcoides sp. (strain CB... [more]
KGUA_DEHE16.861e-2847.06Guanylate kinase OS=Dehalococcoides ethenogenes (s... [more]
KGUA_CLOD61.868e-2543.44Guanylate kinase OS=Clostridium difficile (strain ... [more]
KGUA_CARHZ3.524e-2440.16Guanylate kinase OS=Carboxydothermus hydrogenoform... [more]
KGUA_CLOTE6.010e-2445.90Guanylate kinase OS=Clostridium tetani GN=gmk PE=3... [more]
KGUA_SYMTH7.850e-2444.80Guanylate kinase OS=Symbiobacterium thermophilum G... [more]
KGUA_GLOVI1.749e-2343.41Guanylate kinase OS=Gloeobacter violaceus GN=gmk P... [more]
KGUA_LACS12.284e-2346.22Guanylate kinase OS=Lactobacillus salivarius subsp... [more]
KGUA_LACPL3.896e-2347.06Guanylate kinase OS=Lactobacillus plantarum GN=gmk... [more]
KGUA_GEOKA3.896e-2347.15Guanylate kinase OS=Geobacillus kaustophilus GN=gm... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17D06-G11-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672506 ID=CX672506; Name=CX672506; organism=Citrus sinensis; type=EST; length=772bp
CACAAAACGAAAACGGAAGAGAAGAGCAGAATCTCCTAAATTAACCGGAT
CTGCAAGTCTGCAACAAAACCCATAATCGTTTCTCTATTTGTGATCCCAA
CAGTACGCCCAATCTTCTCCTGATGTTTCGTCGACTCTCCACTTCGTTTT
CTCTCTACATCATCTCAAAACCCAAGTCCCCATTTGCCCTCCAAAGAAAC
CCCATTAAAAGTGAAAAACAATATCAAAGATTCCATCACTCTCTGTCTTT
AACTCCAACGTCGCTTGTTTTTTCATCAAACATCAGAATGAATCATACCC
AGGCCGCCCCTGTTAACAAAATTGAGCTTTTACGGTCGCTTGAAGCTTCA
TTGGGTCATGCCTTTGATTCAAATCCGGTTTGTCCTCCTCCCAATCCTTT
GATAATTGTAATTAGTGGTCCAAGTGGGGTTGGCAAAGATACTGTTATAA
AGAAGCTGAGGGAATCTCGTGATTCTCTTCATTTTGTTGTCACTGCTACT
AGCAGGCCAATGCGGCCTGGTGAAGTGAATGGGAAAGATTATTTCTTTGT
GTCAAAGGAGGAGTTTTTACAAATGGTTGATAAAAATGAGCTGTTGGAAT
ATGCATTAGTGTATGGGGATTACAAGGGGATTCCAAAGAAGCAAATTAGG
GAGTACATGGCGAAAGGGTATGATATTGTGTTGAGAGTGGACATTCAGGG
AGCTCGGACTTTGAGGAGGATTTTGGGGGACTCGGCAGTGTTTGTGTTTC
TGGCAGCAGAGAGTGAGATGGC
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