CX672497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.155e-23 Identity = 67/149 (44.97%), Postives = 84/149 (56.38%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV++ + G GT+ FS EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G A+F I K IPL+G NSVIGR +VVH P + + G VA G IGL Sbjct: 2 VKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23 Identity = 65/149 (43.62%), Postives = 85/149 (57.05%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AV V++ + G GTV F+ EGSGPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G ATF I + IPL+G NS++GR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.573e-23 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 349 V AVAV+TG+ G +GTV F+ EG GPTT+ GSLSGL PG H +H G+ +N +STGP F PAG + G L N+TV +G F + + IPL+G NSV+GR +VVH+ S D G G Sbjct: 2 VKAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHAD-SDDLGKG 128
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22 Identity = 65/149 (43.62%), Postives = 84/149 (56.38%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV++ +N GT++FS EG+GPTTV G+L+GL PG H IH G+ +N ISTGP F P G + G L NI V +G +F I IPL+GTNS+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.277e-22 Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV+ + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G I + IPLSG+NS+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22 Identity = 58/128 (45.31%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 349 V VAV++ + G GT+ F+ EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G A F I K IPL+G +S+IGR +VVH+ P D G G Sbjct: 2 VKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADPD-DLGKG 128
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.081e-21 Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 2 Query: 8 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 AV V++ + G GTV F+ EG GPTTV G++SGL PG H +H G+ +N +STGP + P G + G L NITV +G ATF I + IPLSG NS++GR +VVH+ P + + G VA G IGL Sbjct: 4 AVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.081e-21 Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV+ + G KGT+ FS EG GPT+V GS+SGL PG H +H G+ +N +STGP F P G + G L NIT ++G+A + + IPL+G +S+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 60/149 (40.27%), Postives = 83/149 (55.70%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 373 V AVAV+ + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP + PA + G L N+T ++G+A + + IPL+G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 2 VKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CX672497 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 3.145e-21 Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 2 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 349 V AVAV+ + G GT+ F+ +G+ PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I K IPL+G S+IGR +VVH+ P D G G Sbjct: 2 VKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPD-DLGKG 128 The following BLAST results are available for this feature:
BLAST of CX672497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672497 ID=CX672497; Name=CX672497; organism=Citrus sinensis; type=EST; length=618bpback to top |