CX672491

Overview
NameCX672491
Unique NameCX672491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: KEULE_ARATH (SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2)

HSP 1 Score: 404.831 bits (1039), Expect = 2.951e-112
Identity = 198/228 (86.84%), Postives = 219/228 (96.05%), Query Frame = 1
Query:  142 KNFKQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSGKSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRDLVPTKLAAGVWNCLMKYKQT 825
            KNF+QITRERLLYEMLRSAKTG SKSTWKVLIMD+LTVKIMSYACKMADITQEGVSLVED++RRRQPLPSM+AIYFIQPTKENV+ FLSDMSGKSPLYKKAFVFFSSP+S+ELV HIKKDS+VLPRIGALREMNLE+FA+DSQGF+TD ERALE+LFGDEE+S+K DACLNVMA+RIATVFASLREFP VRYRAAKSLDA T+TT RDL+PTKLAAG+WNCL K+KQ+
Sbjct:   16 KNFRQITRERLLYEMLRSAKTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSLVEDIFRRRQPLPSMDAIYFIQPTKENVIMFLSDMSGKSPLYKKAFVFFSSPVSKELVGHIKKDSSVLPRIGALREMNLEFFAIDSQGFITDHERALEDLFGDEETSRKGDACLNVMASRIATVFASLREFPAVRYRAAKSLDASTMTTLRDLIPTKLAAGIWNCLAKHKQS 243          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: SEC1A_ORYSJ (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.861e-90
Identity = 165/227 (72.69%), Postives = 194/227 (85.46%), Query Frame = 1
Query:  142 KNFKQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSGKSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDE-ESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRDLVPTKLAAGVWNCLMKYK 819
            ++F+QITR+RLL+EMLRS K   SKS WKVLIMD+LTVKIMS++CKMAD+ +EGVSLVEDLY RRQPLP M+AIYFIQPTKEN+  F+SDMSGK PLYKKA+VFFSSP+ RELV  IKKDS V  RIGAL EMNLEYFA+DSQGF TD ++ALEELF +  E S K ++CLN+MATRIATVFAS+REFP V YR A+++DA T+TT RDL PTKLAAGVWNCL ++K
Sbjct:   16 RSFRQITRDRLLFEMLRSTKKS-SKSAWKVLIMDKLTVKIMSFSCKMADVMEEGVSLVEDLYMRRQPLPLMDAIYFIQPTKENIRIFMSDMSGKIPLYKKAYVFFSSPVQRELVAQIKKDSNVRARIGALSEMNLEYFAIDSQGFTTDHDKALEELFSENAEGSLKYNSCLNMMATRIATVFASMREFPRVHYRVARTIDASTLTTLRDLAPTKLAAGVWNCLARFK 241          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: SEC1B_ARATH (Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 1.206e-89
Identity = 161/228 (70.61%), Postives = 193/228 (84.65%), Query Frame = 1
Query:  142 KNFKQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSGKSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRDLVPTKLAAGVWNCLMKYKQT 825
            KNF+QITRERLL EMLR  + G SK TWKVL+MD+ TVKIMS ACKM++ITQ G+SLVE + + RQP+ +ME IYFIQPT+ENV AFLSDM+GKSPLYKKAFVFFSSP+SR LV  IKKD   + RIG L+EMNLEY ++D QGFVT++E ALEELF D+E+ Q+ADACLNV+A RIATV ASL+E+P VRYR AK+LDA T+TT+R+L+PTKLAA VWNCL +YKQT
Sbjct:   16 KNFRQITRERLLCEMLRPERNGSSKLTWKVLVMDKFTVKIMSSACKMSEITQGGISLVEVITKHRQPMTAMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFFSSPVSRSLVNVIKKDMRAMKRIGGLKEMNLEYISMDIQGFVTNNENALEELFCDDENHQRADACLNVVAKRIATVLASLKEYPFVRYRGAKALDATTMTTYRELIPTKLAASVWNCLARYKQT 243          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: SEC1A_ARATH (Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3)

HSP 1 Score: 310.071 bits (793), Expect = 9.892e-84
Identity = 153/227 (67.40%), Postives = 191/227 (84.14%), Query Frame = 1
Query:  142 KNFKQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSGKSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFG-DEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRDLVPTKLAAGVWNCLMKYK 819
            K F+QI+R+RLL+EML S KTG SK+ WK+LIMDR+TVK+MS +CKMADIT +G+SLVE+L++RR+P+P M+AIYFIQP+KEN+V FLSDMSG+ PLY+KAF+FFSS I +ELV HIK DS+VLPRIGALREMN+EYF +D+QGF+TD E+ALE L+  D E+S+    CLN+MATRIATVFASL+E P VRYRAAKS      T  RDLVP+KLAA +W+C+ KYK
Sbjct:   19 KFFRQISRDRLLHEMLGSTKTGDSKA-WKILIMDRVTVKVMSQSCKMADITDQGISLVEELFKRREPMPGMDAIYFIQPSKENIVMFLSDMSGREPLYRKAFIFFSSTIPKELVNHIKSDSSVLPRIGALREMNMEYFPIDNQGFLTDHEQALETLYAEDAENSRHFHICLNIMATRIATVFASLKELPFVRYRAAKS------TASRDLVPSKLAAAIWDCISKYK 238          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: SEC1B_ORYSJ (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 9.915e-76
Identity = 136/228 (59.65%), Postives = 181/228 (79.39%), Query Frame = 1
Query:  142 KNFKQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSGKSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRDLVPTKLAAGVWNCLMKYKQT 825
            K F+ I R+R+L ++L+  K  ++KS+WKVLIMD+ TV+IM+YACKMA+IT  G+SLVEDL++RR+P+PSM+AIYF+QP KENV+  LSDMSG+ PLY+KA++FFSSPI +ELV++IK DS+V+PRIGALREMNLE+FA+D QGF TD + A  +L+  + +S+K +  ++ MATRIAT FASL+EFP VRYRA K  D MT   F D+VP  LA  VW+ + KYK T
Sbjct:   16 KIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIKNDSSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKKFNDTISTMATRIATTFASLKEFPCVRYRAPKGTDPMTTPKF-DMVPKWLATAVWDIVSKYKST 242          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: STXB2_CANFA (Syntaxin-binding protein 2 OS=Canis familiaris GN=STXBP2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.513e-28
Identity = 68/198 (34.34%), Postives = 118/198 (59.60%), Query Frame = 1
Query:  151 KQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSGKSPL-YKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDA 741
            K++  E++L  ++RS K       WKVLIMD  +++I+S  CKM+DI  EG+++VED+ +RR+P+PS+EAIY + PT+++V A ++D  G     YK A +FF+      L T + + S +   +  L+E++L +   ++Q F  D   +   L+      ++A   +  +A +IAT+ A+L+E+P +RYR    + A
Sbjct:    7 KEVVGEKILNGVIRSVK---KDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSLEAIYLLSPTEKSVQALIADFRGTPTFTYKAAHIFFTDTCPEPLFTELSR-SRLAKVVKTLKEIHLAFLPYEAQVFSLDAPHSTYNLYCPFRVGERARQ-IEALAQQIATLCATLQEYPAIRYRKGPEVTA 199          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: STXB1_CHICK (Syntaxin-binding protein 1 OS=Gallus gallus GN=STXBP1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.005e-27
Identity = 67/206 (32.52%), Postives = 121/206 (58.74%), Query Frame = 1
Query:  151 KQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSG-KSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRD 765
            K +  E++++++++  K    K  WKVL++D+L+++++S  CKM DI  EG+++VED+ +RR+PLPS+EA+Y I P++++V + +SD     +  Y+ A VFF+      L   + K S     I  L E+N+ +   +SQ +  D   + +  +   ++  K +  L  +A +IAT+ A+L+E+P VRYR     +AM     +D
Sbjct:    7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTSKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPSESQVYSLDSADSFQSFYSPHKAQMK-NPILERLAEQIATLCATLKEYPAVRYRGDYKDNAMLAQLIQD 207          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: UNC18_CAEEL (Putative acetylcholine regulator unc-18 OS=Caenorhabditis elegans GN=unc-18 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.313e-27
Identity = 71/185 (38.38%), Postives = 113/185 (61.08%), Query Frame = 1
Query:  169 RLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSGKSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRA 723
            +LL +++R  K G  +S W VLI+D L ++++S  CKM +I +EG+++VEDL +RR+PLP++EAIY I PT E++   + D   ++ LYK A VFF+   S +L + + K S     I  L+E+N+ +   +SQ F  D       L+ + +      + L  +A +IATV A+L E+P +RYRA
Sbjct:   92 KLLNDVIRPLKKGDGRSAWNVLIVDTLAMRMLSSCCKMHNIMEEGITIVEDLNKRREPLPTLEAIYLIAPTAESIDKLIQDYCARN-LYKCAHVFFTEACSDQLFSTLSK-SAAARFIKTLKEINIAFTPYESQVFNLDSPDTF-FLYYNAQKQGGLTSNLERIAEQIATVCATLGEYPSLRYRA 273          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: STXB1_RAT (Syntaxin-binding protein 1 OS=Rattus norvegicus GN=Stxbp1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.313e-27
Identity = 66/206 (32.04%), Postives = 121/206 (58.74%), Query Frame = 1
Query:  151 KQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSG-KSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRD 765
            K +  E++++++++  K    K  WKVL++D+L+++++S  CKM DI  EG+++VED+ +RR+PLPS+EA+Y I P++++V + +SD     +  Y+ A VFF+      L   + K S     I  L E+N+ +   +SQ +  D   + +  +   ++  K +  L  +A +IAT+ A+L+E+P VRYR     +A+     +D
Sbjct:    7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHKAQMK-NPILERLAEQIATLCATLKEYPAVRYRGEYKDNALLAQLIQD 207          
BLAST of CX672491 vs. ExPASy Swiss-Prot
Match: STXB1_PONAB (Syntaxin-binding protein 1 OS=Pongo abelii GN=STXBP1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.313e-27
Identity = 66/206 (32.04%), Postives = 121/206 (58.74%), Query Frame = 1
Query:  151 KQITRERLLYEMLRSAKTGKSKSTWKVLIMDRLTVKIMSYACKMADITQEGVSLVEDLYRRRQPLPSMEAIYFIQPTKENVVAFLSDMSG-KSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAVDSQGFVTDDERALEELFGDEESSQKADACLNVMATRIATVFASLREFPLVRYRAAKSLDAMTITTFRD 765
            K +  E++++++++  K    K  WKVL++D+L+++++S  CKM DI  EG+++VED+ +RR+PLPS+EA+Y I P++++V + +SD     +  Y+ A VFF+      L   + K S     I  L E+N+ +   +SQ +  D   + +  +   ++  K +  L  +A +IAT+ A+L+E+P VRYR     +A+     +D
Sbjct:    7 KAVVGEKIMHDVIKKVK---KKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGITIVEDINKRREPLPSLEAVYLITPSEKSVHSLISDFKDPPTAKYRAAHVFFTDSCPDALFNELVK-SRAAKVIKTLTEINIAFLPYESQVYSLDSADSFQSFYSPHKAQMK-NPILERLAEQIATLCATLKEYPAVRYRGEYKDNALLAQLIQD 207          
The following BLAST results are available for this feature:
BLAST of CX672491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
KEULE_ARATH2.951e-11286.84SNARE-interacting protein KEULE OS=Arabidopsis tha... [more]
SEC1A_ORYSJ1.861e-9072.69Probable protein transport Sec1a OS=Oryza sativa s... [more]
SEC1B_ARATH1.206e-8970.61Protein transport Sec1b OS=Arabidopsis thaliana GN... [more]
SEC1A_ARATH9.892e-8467.40Protein transport Sec1a OS=Arabidopsis thaliana GN... [more]
SEC1B_ORYSJ9.915e-7659.65Probable protein transport Sec1b OS=Oryza sativa s... [more]
STXB2_CANFA4.513e-2834.34Syntaxin-binding protein 2 OS=Canis familiaris GN=... [more]
STXB1_CHICK1.005e-2732.52Syntaxin-binding protein 1 OS=Gallus gallus GN=STX... [more]
UNC18_CAEEL1.313e-2738.38Putative acetylcholine regulator unc-18 OS=Caenorh... [more]
STXB1_RAT1.313e-2732.04Syntaxin-binding protein 1 OS=Rattus norvegicus GN... [more]
STXB1_PONAB1.313e-2732.04Syntaxin-binding protein 1 OS=Pongo abelii GN=STXB... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17C09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17C09-E17-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672491 ID=CX672491; Name=CX672491; organism=Citrus sinensis; type=EST; length=826bp
GTTTCGATTTCGATCTTTCTTGTTCAAATGCTTCTTGTAAATAAACAAAC
GATCTCTTAATTCTTGATTTTTAAACCTTGAAAGTCCTGAAGAACGATGT
CGTATTCGGATTCTGACTCTTCATCATACGGTGGTGATTACAAAAATTTC
AAACAAATCACCCGTGAAAGGTTGTTGTATGAAATGCTTCGCTCCGCAAA
AACTGGCAAATCAAAATCAACCTGGAAGGTGCTTATAATGGACAGGCTTA
CTGTTAAGATAATGTCGTACGCGTGCAAGATGGCTGACATTACACAGGAA
GGCGTTTCATTGGTAGAAGACTTGTACAGACGAAGGCAGCCACTGCCTTC
AATGGAAGCCATCTACTTCATCCAACCAACTAAAGAGAACGTTGTTGCGT
TCTTGTCAGACATGTCAGGAAAATCACCTTTATATAAGAAGGCGTTTGTT
TTCTTCAGTTCACCTATTTCAAGAGAATTGGTGACTCACATCAAGAAGGA
TTCAACCGTGTTACCTCGCATAGGTGCATTGAGAGAGATGAATTTGGAAT
ATTTTGCCGTAGACAGCCAGGGTTTTGTCACTGATGATGAAAGGGCCTTG
GAGGAACTTTTTGGTGATGAGGAAAGTTCTCAAAAAGCTGATGCATGCCT
GAATGTGATGGCTACCCGCATTGCTACAGTTTTTGCTTCATTGAGGGAGT
TTCCTTTGGTGCGCTATCGAGCTGCCAAATCACTTGATGCAATGACAATA
ACAACTTTTCGTGATCTCGTTCCTACAAAGCTTGCTGCCGGAGTCTGGAA
CTGTCTTATGAAATATAAACAAACTA
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