CX672490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672490 vs. ExPASy Swiss-Prot
Match: KEULE_ARATH (SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2) HSP 1 Score: 286.574 bits (732), Expect = 1.349e-76 Identity = 143/195 (73.33%), Postives = 169/195 (86.67%), Query Frame = -2 Query: 332 LLGGALESKKSTI*AFSLKFDIHKKKRAARKDRSGREETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTTL---SALTHEVPAAHSMRSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITKLKMLTAH-ELSLDDIQI 904 LLG A+++KK+T F+LKFD+HKKKRA RK+R E WQLSRFYPMIEEL+EKL K EL K+D+PCMNDPSP+FHG+T +A + + AA SMRSRRTPTWA+PR SDDGYSSDSVL+HASSDF+KMGQRIFVFIVGGATRSEL+VCHKL+ KL REV+LGS+SLDDPPQFITKLK+LTA+ +LSLDD+QI Sbjct: 473 LLGSAVDAKKNTPGGFTLKFDLHKKKRAVRKERQ-EEAAWQLSRFYPMIEELIEKLSKGELPKEDFPCMNDPSPSFHGSTSLSSAASSSQGQAAQSMRSRRTPTWAKPRGSDDGYSSDSVLRHASSDFRKMGQRIFVFIVGGATRSELKVCHKLSTKLKREVILGSTSLDDPPQFITKLKLLTANDDLSLDDLQI 666
BLAST of CX672490 vs. ExPASy Swiss-Prot
Match: SEC1A_ORYSJ (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2) HSP 1 Score: 242.662 bits (618), Expect = 2.233e-63 Identity = 123/189 (65.08%), Postives = 149/189 (78.84%), Query Frame = -2 Query: 332 ESKKSTI*AFSLKFDIHKKKRAARKDRSGREETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTTLSALTHEVPA---AHSMRSRRTP-TWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITKLKMLTAHELSLDDIQI 886 +SKKS+ F+LKFD+ KK+ RK+R G E W LSRFYP++EEL+EKL K EL KD+Y +NDPSP+F G SA T PA A SMRSRRT TWARPR SDDGYSSDSVLKH SS+ +K+GQR+FVF++GGATRSEL HKL++KL RE++LGSSSLDDPPQFITKLKML+ +L+LDD+QI Sbjct: 478 DSKKSSAGGFTLKFDLRKKRHGIRKERIGEESKWMLSRFYPILEELIEKLSKGELPKDEYHYLNDPSPSFRGIP-SASTQTSPAHQPAQSMRSRRTGGTWARPRDSDDGYSSDSVLKHTSSNSRKLGQRLFVFVIGGATRSELCAAHKLSSKLKREIILGSSSLDDPPQFITKLKMLSTDDLTLDDLQI 665
BLAST of CX672490 vs. ExPASy Swiss-Prot
Match: SEC1B_ARATH (Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 2.311e-60 Identity = 124/188 (65.96%), Postives = 141/188 (75.00%), Query Frame = -2 Query: 332 ESKKSTI*AFSLKFDIHKKKRAARKDRSGREETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTTLSALTHEVPAAHSM--RSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITKLKMLT-AHELSLDDIQI 886 E KKST +F LKFD+ K KRAAR+DR G +TWQLSRFYP++EELVEKL K L K DYPCMN+P PTF+ +LS P+A + SRRTPTWAR SDDGY SDSVL ASS FK+ GQRIFVFIVGGATRSELRVCHKLT KL+REV+LGSSS DP F+TK+K L E+SLDDI I Sbjct: 481 ECKKSTTGSFPLKFDVLKTKRAARRDRVGETQTWQLSRFYPIVEELVEKLSKGHLPKQDYPCMNEPKPTFYSGSLS------PSASPVLPHSRRTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQRIFVFIVGGATRSELRVCHKLTEKLDREVILGSSSFLDPLTFLTKMKQLNEEEEISLDDIVI 662
BLAST of CX672490 vs. ExPASy Swiss-Prot
Match: SEC1A_ARATH (Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3) HSP 1 Score: 232.646 bits (592), Expect = 2.311e-60 Identity = 125/194 (64.43%), Postives = 144/194 (74.23%), Query Frame = -2 Query: 353 LLGGALESKKSTI*AFSLKFDIHKKKRAARKDRSGREETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPS--PTFHGTTLSALTHEVPAA--------HSMRSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITKLKMLTAHEL 904 L+ G+ E+K + +FSLKFD K K+A RKDRSG EETWQL RFYPMIEEL+EKL K +LSK DY CMN S T S P A HSMRSRRT TWARP SSDDGYSSDSVLK AS++FKK+GQRIFVFI+GGATRSELRVCHKLT+ L REVVLGS+S DDPPQ+ITKLK+L+ ++ Sbjct: 468 LIAGSPENKAKSG-SFSLKFDAGKTKQANRKDRSGEEETWQLFRFYPMIEELLEKLVKGDLSKSDYLCMNQSSHKEESEARTGSVRKSSAPTAVPERKATPHSMRSRRTATWARPHSSDDGYSSDSVLKSASTEFKKLGQRIFVFIIGGATRSELRVCHKLTSSLRREVVLGSTSFDDPPQYITKLKLLSEKDI 660
BLAST of CX672490 vs. ExPASy Swiss-Prot
Match: SEC1B_ORYSJ (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.986e-55 Identity = 113/183 (61.75%), Postives = 136/183 (74.32%), Query Frame = -2 Query: 362 LGGALESKKSTI*AFSLKFDIHKKKRAARKDRSGREETWQLSRFYPMIEELVEKLGKNELSKDDYPCMNDPSPTFHGTTLSALTHEVPAAHSM--RSRRTPTWARPRSSDDGYSSDS-VLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITKLKMLTA 901 L G+ K S FSLKFD KKK AAR +R +ETW LSRF+P+IEEL+EKL K L ++YP M++PS T G+T SA + A M RSRRTPTWA+ R+SDD SSDS VL+H S+DFK++G RIFVF++GGATRSELR HKLT KL RE+VLGSSS+DDPPQFI+KLKMLTA Sbjct: 471 LVGSDTKKASRPGGFSLKFDAQKKKNAARTERQDGDETWALSRFFPLIEELIEKLSKGALPLNEYPSMSEPSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKMLTA 653 The following BLAST results are available for this feature:
BLAST of CX672490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672490 ID=CX672490; Name=CX672490; organism=Citrus sinensis; type=EST; length=905bpback to top |