CX672489

Overview
NameCX672489
Unique NameCX672489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 2.005e-87
Identity = 147/183 (80.33%), Postives = 167/183 (91.26%), Query Frame = 2
Query:  173 MGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDAFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDD 721
            MGR  + TSLAPGFRFHPTDEELVRYYLKRKVC++  +F+ I VTDIYKSEPWDLPDKS+LK+RD EWYFFSMLDKKY NGS+TNRATEKGYWKTTGKDR + + +R VGMKKTLVYH GRAP GERTNWVMHEYRL+D+DL+KAGV Q+A+VLCRIFQKSG+GPKNGEQYGAP++EEEWE+D
Sbjct:    1 MGRG-SVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAPYLEEEWEED 182          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.607e-44
Identity = 80/161 (49.69%), Postives = 110/161 (68.32%), Query Frame = 2
Query:  200 LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDAFVLCRIFQKSGSGPKNGEQ 682
            L PGF FHP D EL+ +YLK+K+  + + +  I   DIYK EPWDLP K  + T+D +W+FF+  D+KY NGSR+NRAT  GYWK+TGKDR +    +T+G KKTLV+H GR P G RT W+MHEY + + + +     +DA+VLCRI +++   P NG +
Sbjct:    9 LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACPDMKDAYVLCRITKRNDWIPGNGNE 169          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.042e-43
Identity = 81/154 (52.60%), Postives = 113/154 (73.38%), Query Frame = 2
Query:  197 SLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKT-RDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVH-HNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDAFVLCRIFQK 652
            S+ PGFRFHPTDEEL+ YYL++KV + ++  + I   D+ K EPWDL D+ R+ T    EWYFFS  DKKY  G+RTNRAT  G+WK TG+D+ +   N   +GM+KTLV+++GRAPHG++T+W+MHEYRL  D+++   V +D +V+CR+F K
Sbjct:    9 SVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLDQDNVD---VQEDGWVVCRVFMK 159          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.566e-42
Identity = 86/167 (51.50%), Postives = 110/167 (65.87%), Query Frame = 2
Query:  188 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPV--HHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDL----EKAGVAQDAFVLCRIFQKSGSGPK 670
            A  +L PGFRFHPTDEELV +YL RKV  + L    I   D+YK +PWDLP+K+      KEWYFF+  D+KY NGSR NRA  +GYWK TG D+PV    + RTVG+KK LV++ G+AP G +T+W+MHEYRL D D     +K     D +VLCR++ K  +  K
Sbjct:   17 AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGR--KEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEK 181          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 9.751e-42
Identity = 88/178 (49.44%), Postives = 114/178 (64.04%), Query Frame = 2
Query:  200 LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDD----LEKAGVAQDAFVLCRIFQKSGS----GPKNGEQYGAPFIEEE 709
            L PGFRFHPTDEELV +YL RK   +S+    I   D+YK +PW+LP  +     +KEWYFFS  D+KY NGSR NR+   GYWK TG D+P+    + VG+KK LV++ G+AP GE+TNW+MHEYRL D D     +K  +  D +VLCRI+ K G+    GP     YG   +EE+
Sbjct:    7 LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYG--EKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI-GLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGDEIMEEK 181          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.274e-41
Identity = 78/174 (44.83%), Postives = 117/174 (67.24%), Query Frame = 2
Query:  206 PGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDK-EWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDAFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDE 724
            PGFRFHPTDEELV YYL++KV  + +  + I   D+YK EPWDL +  ++   ++ +WYFFS  DKKY  G+RTNRAT+ G+WK TG+D+ ++     +GM+KTLV++ GRAP+G++++W+MHEYRL  D  E     ++ +V+CR+F+K  +  +    Y +      W DD+
Sbjct:    9 PGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETD--ENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSS--PSHWYDDQ 178          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.839e-41
Identity = 82/165 (49.70%), Postives = 108/165 (65.45%), Query Frame = 2
Query:  170 LMGREFASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHH--NTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEKAGVAQDAFVLCRIFQKSG 658
            L G E     L PGFRFHPTDEEL+ +YL  K+ H  L    I   D+ + EPW+LP+ +  K  ++EWYF+S+ D+KY  G RTNRAT  GYWK TGKD+ V      + VGMKKTLV++ GRAP G +T WVMHEYRL +D   +    ++ +V+CR+F K+G
Sbjct:   12 LAGEERNERGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMA--KMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHR-HTCKEEWVICRVFNKTG 173          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.255e-41
Identity = 82/183 (44.81%), Postives = 113/183 (61.75%), Query Frame = 2
Query:  188 ASTSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHNTRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTD----DDLEKAGVAQDAFVLCRIFQKSGSGPKNGEQYGAPFIEEEWEDDE 724
            + ++L PGFRFHPTDEEL+ YYL+ +   +    + I   DIYK +PW LP+K+     + EWYFFS  ++KY NG R NRA   GYWK TG D+ +H  +  VG+KK LV++ GR P G +T+W+MHEYRL D           +  D +VLCRI++K G+     EQ G  F++E   +DE
Sbjct:    5 SQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFG--ENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEG--FMDEVLMEDE 183          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40
Identity = 83/158 (52.53%), Postives = 109/158 (68.99%), Query Frame = 2
Query:  200 LAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHN--TRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEK---AGVAQDAFVLCRIFQKSG 658
            + PGFRFHPTDEEL+ YYL +KV   +     I   D+ KSEPW+LP+K+++   +KEWYFF++ D+KY  G RTNRATE GYWK TGKDR +  +     +GMKKTLV++ GRAP GE++ WVMHEYRL D        +  A+D +VLC++  KSG
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMG--EKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL-DGKFSYHYISSSAKDEWVLCKVCLKSG 174          
BLAST of CX672489 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.137e-40
Identity = 85/159 (53.46%), Postives = 104/159 (65.41%), Query Frame = 2
Query:  191 STSLAPGFRFHPTDEELVRYYLKRKVCHRSLRFNPICVTDIYKSEPWDLPDKSRLKTRDKEWYFFSMLDKKYGNGSRTNRATEKGYWKTTGKDRPVHHN--TRTVGMKKTLVYHMGRAPHGERTNWVMHEYRLTDDDLEK--AGVAQDAFVLCRIFQKS 655
            S  L PGFRFHPTDEEL+ +YL RKV         I   D+ K EPW LP   R K  +KEWYFFS+ D+KY  G RTNRATE GYWK TGKDR +  +     VGMKKTLV++ GRAP GE++NWVMHEYRL         +  ++D +V+ R+FQK+
Sbjct:   14 SQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLP--GRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT 170          
The following BLAST results are available for this feature:
BLAST of CX672489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC78_ARATH2.005e-8780.33NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC74_ORYSJ1.607e-4449.69NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC76_ORYSJ1.042e-4352.60NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC68_ORYSJ2.566e-4251.50NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC2_ARATH9.751e-4249.44NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC7_ARATH1.274e-4144.83NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC31_ARATH4.839e-4149.70Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC29_ARATH8.255e-4144.81NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC54_ARATH1.408e-4052.53Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC98_ARATH3.137e-4053.46Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_17C08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17C08-E15-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672489 ID=CX672489; Name=CX672489; organism=Citrus sinensis; type=EST; length=724bp
CTCGTCTTTCTCTGGCTCGCTTCTCCCACTTTTTCTGAAACTCCAATTAA
TTAACCCCAAAAAAAAAAAAACCTAAACCCTAATTTTGAAAAAATTCAGC
TAAAGTTCTAATTATCTTTTTTATAACAATTTAATTAATCGAATCCTTTA
TTTCTGTAATTCGCTTCGATTGATGGGCCGTGAGTTTGCATCGACGTCGT
TAGCTCCGGGGTTCCGATTTCACCCCACCGATGAGGAACTCGTACGGTAT
TATTTGAAACGGAAGGTTTGCCATAGATCGCTCCGGTTCAACCCAATCTG
CGTCACCGATATTTACAAGTCCGAGCCTTGGGACCTACCTGATAAGTCGA
GGTTGAAAACTAGGGACAAGGAGTGGTATTTTTTTAGTATGTTGGATAAG
AAGTATGGCAATGGGTCGAGGACCAATAGGGCCACTGAAAAAGGATACTG
GAAGACCACTGGGAAGGATCGCCCTGTTCATCATAATACGCGGACTGTTG
GGATGAAGAAGACCCTTGTCTATCACATGGGGAGGGCTCCTCATGGCGAA
CGTACCAATTGGGTGATGCATGAGTACCGCCTCACTGATGACGATTTGGA
GAAAGCTGGAGTTGCGCAGGATGCATTTGTTCTGTGTAGGATATTCCAGA
AGAGTGGATCAGGGCCAAAGAATGGGGAGCAGTATGGGGCACCTTTTATT
GAAGAGGAATGGGAGGATGATGAG
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