CX672481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 5.224e-79 Identity = 139/167 (83.23%), Postives = 154/167 (92.22%), Query Frame = -3 Query: 122 LEVGRETAALT----AALIHGRWAMAAVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLVMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAGQGKTP 610 L +G++ A L A LIHGRWAMAAV+GIFVGQ WSGIPWFEAGADPGAIAPFSFG+LLGTQL++MGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+RLKVAEIKHARLAM+AMLIFYFEAGQGKTP Sbjct: 84 LGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFEAGQGKTP 250
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 2.195e-77 Identity = 136/167 (81.44%), Postives = 153/167 (91.62%), Query Frame = -3 Query: 122 LEVGRETAALT----AALIHGRWAMAAVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLVMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAGQGKTP 610 L +G++ A L A LIHGRWAMAAV+GIFVGQ WSGIPWFEAGADPGAIAPFSFGSLLGTQLL+MGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFDPL LAGT+ +GVY+PDTEKL+RLK+AEIKH+RLAM+AMLIFYFEAGQGKTP Sbjct: 84 LGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGKTP 250
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.867e-77 Identity = 136/167 (81.44%), Postives = 153/167 (91.62%), Query Frame = -3 Query: 122 LEVGRETAALT----AALIHGRWAMAAVVGIFVGQTWSGIPWFEAGADPGAIAPFSFGSLLGTQLLVMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEAGQGKTP 610 L +G++ A L A LIHGRWAM AV+GIFVGQ W+GIPWFEAGADPGA+APFSFG+LLGTQLL+MGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKFFDPL LAGTI +GVY PDT+KL+RLK+AEIKHARLAM+AMLIFYFEAGQGKTP Sbjct: 89 LGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTP 255
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.099e-44 Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 3 Query: 576 AVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIG 941 AVSAAV IIS D+I F KVP YY++VS G R+VS+RAQVTTEAPAKVEK SKK +EGVIVNKF+PK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIG Sbjct: 4 AVSAAVSLPSSKSTSFSSRTSIISTDKINFNKVPLYYRNVSGGSRLVSIRAQVTTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIG 125
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 8.154e-40 Identity = 74/107 (69.16%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 639 IISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTE------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIG 941 +ISPD+I+++KVP YY++VS G++ +RAQ+ ++ APAKVEK SKKMEEG+ VNKFKPKTPY+GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+G Sbjct: 26 VISPDKISYKKVPLYYRNVSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVG 132
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 4.047e-39 Identity = 80/123 (65.04%), Postives = 94/123 (76.42%), Query Frame = 3 Query: 573 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIG 941 AAV+AAV I++P+R+ F+KV +VS GRV ++RAQVTTEAPAKV K SKK +E ++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIG Sbjct: 3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NNVSISGRVGTIRAQVTTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIG 123
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.787e-37 Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 3 Query: 639 IISPDRITFRKVPFYYKDVSTGGRVVSVRAQVT-TEAP-AKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIG 941 +I+ ++I F KVP YY++VS GG+V ++RA + EAP AKVEK SKKMEEGVIVNK+KPK PY GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+G Sbjct: 26 VITHEKINFNKVPLYYRNVSVGGKVGTIRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVG 128
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.102e-36 Identity = 78/126 (61.90%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 573 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPA---KVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIG 941 AAV+AAV I++P+R+ F+KV VS GRV ++RAQ+TTEA A KV K SKK +EG++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVF+TEGEVPY+EGQSIG Sbjct: 3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFTTEGEVPYREGQSIG 126
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.298e-34 Identity = 77/127 (60.63%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 573 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEA----PAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIG 941 AA+SAAV +SP RI +K Y+ RVVSV+AQVTT+ P KV KESKK EEG++VNKFKPK PY GRCLLNTKITGDDAPGETWH+VF+TEGEVPY+EGQSIG Sbjct: 3 AAISAAVSLPSSKSSSLLTKISSVSPQRIFLKKSTVCYR------RVVSVKAQVTTDTTEAPPVKVVKESKKQEEGIVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHIVFTTEGEVPYREGQSIG 123
BLAST of CX672481 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.945e-33 Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 3 Query: 642 ISPDRITFRKVPFYYK--DVSTGGRVVSVRAQVTTEA----PAK-VEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIG 941 I+P+RI F K FYYK +V TG RV S++AQ+TTE PAK VEK SKK EEGVIVN+++PK PY G+CLLNTKIT DDAPGETWHMVFS +GE+PY+EGQS+G Sbjct: 26 IAPERIRFTKGAFYYKSNNVVTGKRVFSIKAQITTETDTPTPAKKVEKVSKKNEEGVIVNRYRPKEPYTGKCLLNTKITADDAPGETWHMVFSHQGEIPYREGQSVG 132 The following BLAST results are available for this feature:
BLAST of CX672481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672481 ID=CX672481; Name=CX672481; organism=Citrus sinensis; type=EST; length=942bpback to top |