CX672480

Overview
NameCX672480
Unique NameCX672480
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX672480 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 6.143e-33
Identity = 66/108 (61.11%), Postives = 86/108 (79.63%), Query Frame = -1 
Query:  224 LLDMFNSGGAVENVEV-HMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYYYQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 544
            L+DMFNS GA+E++++ H+++K P+ FDGE+SS  + +LSDNRSPTA +S+ VRGCGRFG Y  QRPLKC V S +TDFTYD+  GL+T+ LPV  EEM+RW VEI V
Sbjct:  667 LVDMFNSSGAIESIDINHVTDKNPEFFDGEISSA-SPALSDNRSPTALVSVSVRGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWHVEILV 773
The following BLAST results are available for this feature:
BLAST of CX672480 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RFS2_ARATH6.143e-3361.11Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_17C02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17C02-E3-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672480 ID=CX672480; Name=CX672480; organism=Citrus sinensis; type=EST; length=544bp
TTTTTTTTTTTTTTTTTGAAAATTCGATGATCAGAGGATCAGACCACTTT
TATTACAGAGAACCAAACAGCAACATAATTCTAGCAATTATTCTTTTCAT
GATCATCACTCAAATGCAAGTCATGTTTCACCACAGCTTCCCACTTGAAT
GGAAACCACCCCTGAACATGGTGACAAATCTAACAATCTGATGTTATTTA
ATAACATAACATGAAAGTCCTTAGACTTGGATCTCAACAGGCCATCTGTA
CATCTCTTCCTCCGGAACCGGGAGTGTCATGGTCATCAACCCGGTTGCAG
AATCGTAGGTGAAGTCGGTCTGGATGCTGCCCACGGTGCATTTCAGAGGA
CGCTGGTAATAGTAAATGCCAAACCTTCCACATCCCCTAACTTTGAGAGA
GATTGTGGCGGTTGGAGATCGGTTGTCACTGAGGGAGGTGGTCAGTTCAG
AAGATACTTCACCATCAAAGAGATCTGGCTTCTTCTCAGACATATGCACC
TCCACATTCTCGACAGCACCTCCACTGTTGAACATGTCGAGCAA
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