EY664822
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 1.944e-46 Identity = 84/213 (39.44%), Postives = 121/213 (56.81%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTEQNFRLNWASFG-IGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVFCSTRPMRISAATPKKTTGFQQQYAAVKATYPVAAYTTPVHVFXADNDITNTTI 709 TLW+G+L+ W E ++ + G+ V +K+IRN+ TG GY FVEF S A + + N P+PGT F+LNWAS G + EK E+SIFVGDL+P+V ++ + F S+Y S + AK++TDP T S+GYGFV+F DEN++ A+ EM G C RP+R+ ATPK V + P + + D N+T+ Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTV 305 HSP 2 Score: 42.743 bits (99), Expect = 1.944e-46 Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 3 Query: 714 VGNLDPNVTER*SEATFLHFGEIVNVKIPMGQRCGFVQF 830 VG L V+E + F +FGEIV VKIP G+ CGFVQF Sbjct: 307 VGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQF 345
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 1.066e-44 Identity = 100/191 (52.36%), Postives = 128/191 (67.02%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622 +LW+GDL+ + DEN++S FA GE V+S+KIIRN++TG P GY FVEF A AE+ L NG P+PG + F+LN+A++G K+PD PE+S+FVGDL PDV D +L E F YPS RG KVV DP TG SKGYGFVKF DE E+ RA+TE G V +P+R+S A PK K + Q Y+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRVKPVEYSQMYS 190
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.050e-44 Identity = 99/191 (51.83%), Postives = 128/191 (67.02%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622 +LW+GDL+ + DEN++S FA GE V+S+KIIRN++TG P GY FVEF A AE+ L NG P+PG + F+LN+A++G K+PD PE+S+FVGDL PDV D +L E F YPS RG KVV D TG SKGYGFVKF DE E+ RA+TE G V ++P+R+S A PK K + Q Y+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVEYSQMYS 190
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.289e-44 Identity = 98/191 (51.31%), Postives = 128/191 (67.02%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622 +LW+GDL+ + DEN++S FA GE V+S+KIIRN++TG P GY FVEF A AE+ L NG P+PG + F+LN+A++G K+PD PE+S+FVGDL PDV D +L E F YPS RG KVV D TG SKGYGFVKF DE E+ RA+TE G + ++P+R+S A PK K + Q Y+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKASRVKPVEYSQMYS 190
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.908e-44 Identity = 99/191 (51.83%), Postives = 127/191 (66.49%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622 +LW+GDL+ + DEN++S FA GE V+S+KIIRN++TG P GY FVEF A AE+ L NG P+PG + F+LN+A++G K+PD PE+S+FVGDL PDV D +L E F YPS RG KVV D TG SKGYGFVKF DE E+ RA+TE G V +P+R+S A PK K + Q Y+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRVKPVEYSQMYS 190
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.178e-43 Identity = 98/191 (51.31%), Postives = 127/191 (66.49%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622 +LW+GDL+ + DEN++S FA GE V+S+KIIRN++TG P GY FVEF A AE+ L NG P+PG + F+LN+ ++G K+PD PE+S+FVGDL PDV D +L E F YPS RG KVV D TG SKGYGFVKF DE E+ RA+TE G V ++P+R+S A PK K + Q Y+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVEYSQMYS 190
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.454e-43 Identity = 81/177 (45.76%), Postives = 105/177 (59.32%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGEVVSIKIIRNKITGQPE--GYGFVEFVSHAAAERVLQTYNGTPMPGTEQNFRLNWASFGIGEKRP--DAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVFCSTRPMRISAATPK 592 TLW+GDL+ W D ++ +A E V++K++R+K + Y FV+F S AAAER L YN T +PG F+LNWA+ G + PE SIFVGDL P D L TFRS YPS AK++ DP TG S+ YGFV+F E E+ A+ M G C RP+RIS A+PK Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPK 262 HSP 2 Score: 44.2838 bits (103), Expect = 1.454e-43 Identity = 19/39 (48.72%), Postives = 27/39 (69.23%), Query Frame = 3 Query: 714 VGNLDPNVTER*SEATFLHFGEIVNVKIPMGQRCGFVQF 830 VG L N++E+ + F FG I+N+KIP G+ CGFVQ+ Sbjct: 301 VGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQY 339
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.398e-38 Identity = 87/207 (42.03%), Postives = 124/207 (59.90%), Query Frame = 2 Query: 74 TLWIGDLQYWFDENYLSSCFAHTGEVV-SIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTE-MNGVFCSTRPMRISAATPK--KTTGFQQQYAAVKATYPVAAYTTPVHVF 676 +LW+GDL + DEN++ F+ GE +KII +++TG GY FVE A+ +R +Q NG +PG+ + F+LN+A++G KRP+ GPE S+FVGDL +V DY L + F ++PS +GAKVVTDP G S+GYGFVKF DENE+ +A+ E N +P+RIS A K K + + Q Y Y P + + Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTDP-YGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKGNKASTYHNQNNTYNTNYQQQYYRQPYNSY 209
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_DANRE (tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.309e-26 Identity = 69/179 (38.55%), Postives = 104/179 (58.10%), Query Frame = 2 Query: 68 VRTLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGT--EQNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVF-CSTRPMRISAATPK 592 + +LW+G+L+ + DE+++ FA GE VV I++IR+KITG+ GYGFVE A ER L+ NG P+PG + F+L+ +++G + S+FV DL PDV D +L E F + S K+V D N G SK GFV F E E+ RA+ ++ G + +R+S A+ + Sbjct: 1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLRKVNGKPLPGATPPKRFKLSRSNYG----KQGESSTFSLFVSDLTPDVDDGMLYEFFHYHFSSCCSGKIVLDAN-GHSKCCGFVSFESEREQKRALVDLQGATGLGKKALRLSLASSR 174
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.432e-22 Identity = 60/153 (39.22%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 197 GYGFVEFVSHAAAERVLQTYNGTPMPGT-------------EQNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVFCSTRPMRISAATPKKTTGFQQQ 616 GY FVEF + A+ L + N TP+P ++ FRLNWAS + + PE S+FVGDL+P T+ L F++++ SV+ +V+TDP TG S+ +GFV+F DE+ER RA+ EM+G + R +R++ ATP+ Q Q Sbjct: 129 GYCFVEFETQKDAKFAL-SLNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQ 280 The following BLAST results are available for this feature:
BLAST of EY664822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664822 ID=EY664822; Name=EY664822; organism=Citrus sinensis; type=EST; length=924bpback to top |