EY664822

Overview
NameEY664822
Unique NameEY664822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1924 contig Csv1_Contig1924:14..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 1.944e-46
Identity = 84/213 (39.44%), Postives = 121/213 (56.81%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTEQNFRLNWASFG-IGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVFCSTRPMRISAATPKKTTGFQQQYAAVKATYPVAAYTTPVHVFXADNDITNTTI 709
            TLW+G+L+ W  E ++   +   G+ V +K+IRN+ TG   GY FVEF S   A   + + N  P+PGT   F+LNWAS G + EK      E+SIFVGDL+P+V ++ +   F S+Y S + AK++TDP T  S+GYGFV+F DEN++  A+ EM G  C  RP+R+  ATPK           V  + P   + +         D  N+T+
Sbjct:   94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANSTV 305          

HSP 2 Score: 42.743 bits (99), Expect = 1.944e-46
Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  714 VGNLDPNVTER*SEATFLHFGEIVNVKIPMGQRCGFVQF 830
            VG L   V+E   +  F +FGEIV VKIP G+ CGFVQF
Sbjct:  307 VGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQF 345          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.066e-44
Identity = 100/191 (52.36%), Postives = 128/191 (67.02%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622
            +LW+GDL+ + DEN++S  FA  GE V+S+KIIRN++TG P GY FVEF   A AE+ L   NG P+PG    + F+LN+A++G   K+PD  PE+S+FVGDL PDV D +L E F   YPS RG KVV DP TG SKGYGFVKF DE E+ RA+TE  G V    +P+R+S A PK    K   + Q Y+
Sbjct:    4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRVKPVEYSQMYS 190          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.050e-44
Identity = 99/191 (51.83%), Postives = 128/191 (67.02%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622
            +LW+GDL+ + DEN++S  FA  GE V+S+KIIRN++TG P GY FVEF   A AE+ L   NG P+PG    + F+LN+A++G   K+PD  PE+S+FVGDL PDV D +L E F   YPS RG KVV D  TG SKGYGFVKF DE E+ RA+TE  G V   ++P+R+S A PK    K   + Q Y+
Sbjct:    4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVEYSQMYS 190          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.289e-44
Identity = 98/191 (51.31%), Postives = 128/191 (67.02%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622
            +LW+GDL+ + DEN++S  FA  GE V+S+KIIRN++TG P GY FVEF   A AE+ L   NG P+PG    + F+LN+A++G   K+PD  PE+S+FVGDL PDV D +L E F   YPS RG KVV D  TG SKGYGFVKF DE E+ RA+TE  G +   ++P+R+S A PK    K   + Q Y+
Sbjct:    4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRLSVAIPKASRVKPVEYSQMYS 190          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.908e-44
Identity = 99/191 (51.83%), Postives = 127/191 (66.49%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622
            +LW+GDL+ + DEN++S  FA  GE V+S+KIIRN++TG P GY FVEF   A AE+ L   NG P+PG    + F+LN+A++G   K+PD  PE+S+FVGDL PDV D +L E F   YPS RG KVV D  TG SKGYGFVKF DE E+ RA+TE  G V    +P+R+S A PK    K   + Q Y+
Sbjct:    4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKASRVKPVEYSQMYS 190          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.178e-43
Identity = 98/191 (51.31%), Postives = 127/191 (66.49%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNG-VFCSTRPMRISAATPK----KTTGFQQQYA 622
            +LW+GDL+ + DEN++S  FA  GE V+S+KIIRN++TG P GY FVEF   A AE+ L   NG P+PG    + F+LN+ ++G   K+PD  PE+S+FVGDL PDV D +L E F   YPS RG KVV D  TG SKGYGFVKF DE E+ RA+TE  G V   ++P+R+S A PK    K   + Q Y+
Sbjct:    4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVEYSQMYS 190          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.454e-43
Identity = 81/177 (45.76%), Postives = 105/177 (59.32%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGEVVSIKIIRNKITGQPE--GYGFVEFVSHAAAERVLQTYNGTPMPGTEQNFRLNWASFGIGEKRP--DAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVFCSTRPMRISAATPK 592
            TLW+GDL+ W D  ++   +A   E V++K++R+K +       Y FV+F S AAAER L  YN T +PG    F+LNWA+ G  +        PE SIFVGDL P   D  L  TFRS YPS   AK++ DP TG S+ YGFV+F  E E+  A+  M G  C  RP+RIS A+PK
Sbjct:   86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPK 262          

HSP 2 Score: 44.2838 bits (103), Expect = 1.454e-43
Identity = 19/39 (48.72%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  714 VGNLDPNVTER*SEATFLHFGEIVNVKIPMGQRCGFVQF 830
            VG L  N++E+  +  F  FG I+N+KIP G+ CGFVQ+
Sbjct:  301 VGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQY 339          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.398e-38
Identity = 87/207 (42.03%), Postives = 124/207 (59.90%), Query Frame = 2
Query:   74 TLWIGDLQYWFDENYLSSCFAHTGEVV-SIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGTE--QNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTE-MNGVFCSTRPMRISAATPK--KTTGFQQQYAAVKATYPVAAYTTPVHVF 676
            +LW+GDL  + DEN++   F+  GE    +KII +++TG   GY FVE    A+ +R +Q  NG  +PG+   + F+LN+A++G   KRP+ GPE S+FVGDL  +V DY L + F  ++PS +GAKVVTDP  G S+GYGFVKF DENE+ +A+ E  N      +P+RIS A  K  K + +  Q       Y    Y  P + +
Sbjct:    7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTDP-YGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNKGNKASTYHNQNNTYNTNYQQQYYRQPYNSY 209          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: TSAP1_DANRE (tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.309e-26
Identity = 69/179 (38.55%), Postives = 104/179 (58.10%), Query Frame = 2
Query:   68 VRTLWIGDLQYWFDENYLSSCFAHTGE-VVSIKIIRNKITGQPEGYGFVEFVSHAAAERVLQTYNGTPMPGT--EQNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVF-CSTRPMRISAATPK 592
            + +LW+G+L+ + DE+++   FA  GE VV I++IR+KITG+  GYGFVE     A ER L+  NG P+PG    + F+L+ +++G    +       S+FV DL PDV D +L E F   + S    K+V D N G SK  GFV F  E E+ RA+ ++ G      + +R+S A+ +
Sbjct:    1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLRKVNGKPLPGATPPKRFKLSRSNYG----KQGESSTFSLFVSDLTPDVDDGMLYEFFHYHFSSCCSGKIVLDAN-GHSKCCGFVSFESEREQKRALVDLQGATGLGKKALRLSLASSR 174          
BLAST of EY664822 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.432e-22
Identity = 60/153 (39.22%), Postives = 89/153 (58.17%), Query Frame = 2
Query:  197 GYGFVEFVSHAAAERVLQTYNGTPMPGT-------------EQNFRLNWASFGIGEKRPDAGPEHSIFVGDLAPDVTDYLLQETFRSQYPSVRGAKVVTDPNTGRSKGYGFVKFLDENERNRAMTEMNGVFCSTRPMRISAATPKKTTGFQQQ 616
            GY FVEF +   A+  L + N TP+P               ++ FRLNWAS    +    + PE S+FVGDL+P  T+  L   F++++ SV+  +V+TDP TG S+ +GFV+F DE+ER RA+ EM+G +   R +R++ ATP+     Q Q
Sbjct:  129 GYCFVEFETQKDAKFAL-SLNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQ 280          
The following BLAST results are available for this feature:
BLAST of EY664822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
YG41_SCHPO1.944e-4639.44Uncharacterized RNA-binding protein C23E6.01c OS=S... [more]
TSAP1_MOUSE1.066e-4452.36tRNA selenocysteine 1-associated protein 1 OS=Mus ... [more]
TSAP1_HUMAN4.050e-4451.83tRNA selenocysteine 1-associated protein 1 OS=Homo... [more]
TSAP1_BOVIN5.289e-4451.31tRNA selenocysteine 1-associated protein 1 OS=Bos ... [more]
TSAP1_RAT6.908e-4451.83tRNA selenocysteine 1-associated protein 1 OS=Ratt... [more]
TSAP1_PONAB1.178e-4351.31tRNA selenocysteine 1-associated protein 1 OS=Pong... [more]
CSX1_SCHPO1.454e-4345.76RNA-binding post-transcriptional regulator csx1 OS... [more]
TSP1L_DANRE7.398e-3842.03tRNA selenocysteine 1-associated protein 1-like OS... [more]
TSAP1_DANRE1.309e-2638.55tRNA selenocysteine 1-associated protein 1 OS=Dani... [more]
NGR1_YEAST7.432e-2239.22Negative growth regulatory protein NGR1 OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-H03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664822 ID=EY664822; Name=EY664822; organism=Citrus sinensis; type=EST; length=924bp
AATGGCGACTGCAGGGCCGCAAGGAGGAGGCTACCCTCAGCACCATCATC
CAATGACTTTAGAAGAAGTGAGAACGCTCTGGATTGGTGACTTACAGTAC
TGGTTCGATGAGAATTACCTTAGCTCCTGCTTCGCTCACACCGGCGAGGT
AGTTTCAATAAAGATTATACGTAACAAGATCACTGGCCAGCCAGAGGGTT
ATGGGTTTGTGGAGTTTGTTTCACATGCAGCAGCAGAGAGGGTTCTGCAG
ACTTACAATGGGACTCCAATGCCTGGGACTGAACAAAATTTCAGGTTGAA
TTGGGCTTCTTTTGGGATTGGTGAGAAGCGTCCTGATGCCGGTCCTGAGC
ACTCGATTTTCGTAGGGGATTTAGCACCTGATGTTACTGATTATCTGTTG
CAAGAGACCTTTCGATCTCAATATCCATCTGTTAGAGGTGCCAAGGTTGT
GACTGATCCAAATACTGGTCGCTCCAAGGGATATGGGTTTGTCAAATTTT
TGGATGAGAATGAAAGAAACCGTGCAATGACTGAAATGAATGGCGTCTTT
TGCTCAACTCGGCCAATGCGTATTAGTGCAGCAACACCCAAAAAGACTAC
TGGGTTCCAACAACAATATGCCGCTGTAAAAGCCACATATCCAGTTGCAG
CATACACTACCCCTGTGCATGTGTTTNCAGCAGATAATGATATCACTAAT
ACGACGATTNNTTGTCGGTAATTTAGATCCTAATGTCACAGAAAGATGAT
CTGAAGCAACATTTTTGCACTTTGGAGAGATCGTGAATGTCAAGATTCCT
ATGGGGCAGAGATGTGGTTTTGTACAGTTTGCGGCTAGGGCATCTGCTGA
GGAAGCATNCCTGAGATGCAGGGCACATGATAAGTCACAACAGTCCGTAT
TTCTGGGCAGGAACAGATGTACTG
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