CX672471

Overview
NameCX672471
Unique NameCX672471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX672471 vs. ExPASy Swiss-Prot
Match: EBM_LILLO (Mannosylglycoprotein endo-beta-mannosidase OS=Lilium longiflorum GN=EBM PE=1 SV=4)

HSP 1 Score: 476.478 bits (1225), Expect = 7.531e-134
Identity = 218/265 (82.26%), Postives = 240/265 (90.57%), Query Frame = 2 
Query:    5 INKALKNDLKLHPYFKNSNETGNFTEDLSLSVQDPSQYLDGTRIYIQGSLWDGFADGKGNFTDGPYEIQYPEDFFKDSFYQYGFNPEVGSVGMPVAATIRATMPPEGWQIPVFKHGSDGYIEEVPNPIWKYHKYIPYSKPGKVHDQILLYGIPKDLDDFCLKAQLVNYIQYRALLEGWSSRMWSKYTGVLIWKNQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLASYFIEVVNTTSQELSDVAIEASVWDLDGACPY 799
            IN ALKNDLKLHP+FK++  T    ED+    +DPSQYLDGTR+YIQGS+W+GFA+GKG+FTDGPYEIQ PEDFFKD FY YGFNPEVGSVG+PVAATIRATMPPEGWQIP+FK  SDG+IEEVPNPIW+YHKYI YSKPGKVHDQI+LYG P +LDDFC KAQLVNY+QYRALLEGW+SRMW+KYTGVLIWK QNPWTGLRGQFYDHL DQTAGFYGCRCAAEP+HVQLNLA+YFIEVVNTT +ELSDVAIE SVWDLDG CPY
Sbjct:  468 INSALKNDLKLHPFFKHNGVTV-IGEDMLSETEDPSQYLDGTRVYIQGSMWEGFANGKGDFTDGPYEIQNPEDFFKDDFYSYGFNPEVGSVGVPVAATIRATMPPEGWQIPLFKRLSDGFIEEVPNPIWEYHKYISYSKPGKVHDQIVLYGQPTNLDDFCEKAQLVNYVQYRALLEGWTSRMWTKYTGVLIWKTQNPWTGLRGQFYDHLHDQTAGFYGCRCAAEPVHVQLNLATYFIEVVNTTHEELSDVAIEVSVWDLDGTCPY 731
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BLAST of CX672471 vs. ExPASy Swiss-Prot
Match: EBM_ARATH (Mannosylglycoprotein endo-beta-mannosidase OS=Arabidopsis thaliana GN=EBM PE=1 SV=3)

HSP 1 Score: 468.389 bits (1204), Expect = 2.051e-131
Identity = 216/265 (81.51%), Postives = 237/265 (89.43%), Query Frame = 2 
Query:    5 INKALKNDLKLHPYFKNSNETGNFTEDLSLSVQDPSQYLDGTRIYIQGSLWDGFADGKGNFTDGPYEIQYPEDFFKDSFYQYGFNPEVGSVGMPVAATIRATMPPEGWQIPVFKHGSDGYIEEVPNPIWKYHKYIPYSKPGKVHDQILLYGIPKDLDDFCLKAQLVNYIQYRALLEGWSSRMWSKYTGVLIWKNQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLASYFIEVVNTTSQELSDVAIEASVWDLDGACPY 799
            IN+ALK DL+LH YF+        T+ LS    DPS YLDGTR+YIQGS+WDGFADGKGNFTDGPYEIQYPEDFFKD++Y+YGFNPEVGSVGMPVA TIRATMPPEGW IP+FK G DG+I+EVPN +W YHKYIPYS PGKVHDQIL+YG P++LDDFCLKAQLVNYIQYRAL EGWSS+MW+KYTGVLIWKNQNPWTGLRGQFYDHLLDQTA FYGCR AAEP+HVQLNLASYF+EVVNTTS+ELSDVAIEASVWDLDG CPY
Sbjct:  471 INEALKQDLRLHSYFE--------TQLLSDKDSDPSVYLDGTRVYIQGSMWDGFADGKGNFTDGPYEIQYPEDFFKDTYYKYGFNPEVGSVGMPVAETIRATMPPEGWTIPLFKKGLDGFIKEVPNRMWDYHKYIPYSNPGKVHDQILMYGTPENLDDFCLKAQLVNYIQYRALFEGWSSQMWTKYTGVLIWKNQNPWTGLRGQFYDHLLDQTASFYGCRSAAEPVHVQLNLASYFVEVVNTTSKELSDVAIEASVWDLDGNCPY 727
The following BLAST results are available for this feature:
BLAST of CX672471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EBM_LILLO7.531e-13482.26Mannosylglycoprotein endo-beta-mannosidase OS=Lili... [more]
EBM_ARATH2.051e-13181.51Mannosylglycoprotein endo-beta-mannosidase OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_17B08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17B08-C15-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672471 ID=CX672471; Name=CX672471; organism=Citrus sinensis; type=EST; length=801bp
GTACATCAACAAAGCTTTGAAGAATGACCTGAAGCTCCATCCTTATTTTA
AGAATTCAAATGAAACTGGGAACTTTACAGAAGATTTGTCTCTGTCGGTT
CAGGATCCTAGCCAATATCTTGATGGTACACGCATTTATATACAGGGATC
CCTGTGGGATGGCTTTGCAGATGGAAAGGGGAACTTCACTGATGGTCCTT
ATGAAATCCAATATCCTGAAGACTTCTTTAAGGATAGTTTTTACCAATAT
GGATTTAATCCTGAGGTTGGTTCAGTGGGAATGCCAGTTGCAGCTACCAT
CAGAGCAACCATGCCTCCAGAAGGATGGCAAATTCCGGTGTTTAAACATG
GTTCTGATGGTTACATAGAAGAAGTTCCAAACCCCATTTGGAAATACCAT
AAGTATATTCCTTATTCAAAGCCAGGGAAGGTTCATGATCAGATTCTACT
TTATGGGATCCCAAAAGATCTTGATGATTTTTGTTTGAAGGCTCAACTTG
TCAACTACATTCAGTATAGGGCTCTGTTGGAGGGCTGGAGTTCCCGCATG
TGGAGCAAATACACTGGTGTCCTGATTTGGAAGAATCAGAATCCATGGAC
AGGTCTCAGAGGTCAGTTTTATGATCATCTTCTCGACCAAACAGCAGGAT
TCTATGGCTGTCGATGTGCTGCAGAACCAATTCATGTCCAGCTGAATCTG
GCTTCATATTTCATAGAAGTCGTTAACACTACATCACAGGAACTCTCCGA
CGTAGCTATAGAAGCATCTGTTTGGGATCTGGATGGAGCATGCCCATACT
A
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