CX672470

Overview
NameCX672470
Unique NameCX672470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX672470 vs. ExPASy Swiss-Prot
Match: EBM_LILLO (Mannosylglycoprotein endo-beta-mannosidase OS=Lilium longiflorum GN=EBM PE=1 SV=4)

HSP 1 Score: 152.14 bits (383), Expect = 3.583e-36
Identity = 82/167 (49.10%), Postives = 101/167 (60.48%), Query Frame = -1 
Query:  356 EPYRKKNIPLKLTSQIFIKGSTYEVEMQVHNRSKKQDPKRLTYKNNFTTVPVDGDFSMASTEPVNSATEEKQEAGLFRRICRHFMD--TDSLKVAELNGTDSGVAFFLHFSVRGWSKSHKEGEDTRILPVHYSDNYFSLAPGEVMPIKISFEVPHGVTPKVTLHGWN 850
            EPYR    PLKLTS++ I GS Y+++M+V N SK  + + + +  N                  +  ++  ++ G   RIC  F +  TDSL+V E  GT SGVAFFLHFSV    K   E ED RILPVHYSDNYFSL PGE   I ISFEVPHGVTP+V+L GWN
Sbjct:  796 EPYRAIEAPLKLTSEVNIVGSAYKIQMRVQNLSKNLNSESVNFLAN------------------DEKSDLSKKEGYISRICSGFKNSGTDSLRVVETKGTGSGVAFFLHFSVHAVKKDENEIEDLRILPVHYSDNYFSLVPGETTNISISFEVPHGVTPRVSLRGWN 944
[Close]
BLAST of CX672470 vs. ExPASy Swiss-Prot
Match: EBM_ARATH (Mannosylglycoprotein endo-beta-mannosidase OS=Arabidopsis thaliana GN=EBM PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 5.011e-30
Identity = 78/172 (45.35%), Postives = 99/172 (57.56%), Query Frame = -1 
Query:  353 EPYRKKNIPLKLTSQIFIKGSTYEVEMQVHNRSKKQDPKRLTYKNNFTTVPVDGDFSMASTEPVNSATEEKQEAGLFRRI-CRHFMDTDS---LKVAELNGTDSGVAFFLHFSVRGWSKSHKEGEDTRILPVHYSDNYFSLAPGEVMPIKISFEVPHGV--TPKVTLHGWNY 850
            EPYRKK IPLK+T    + GS YE+E+ VHN S+    K +  +                        +EK++ GL +++  R  +  DS   LKV E+ G+DSGVAFFL FSV     +  E +DTRILPVHYSDNYFSL PGE M  KISF  P G+  +P+V L GWNY
Sbjct:  792 EPYRKKQIPLKITCNAVMVGSRYELEVNVHNTSRANLAKNVVQE------------------------DEKRDLGLLQKLFSRCVVSADSNRGLKVVEMKGSDSGVAFFLRFSVHN---AETEKQDTRILPVHYSDNYFSLVPGESMSFKISFAAPTGMKKSPRVMLQGWNY 936
The following BLAST results are available for this feature:
BLAST of CX672470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EBM_LILLO3.583e-3649.10Mannosylglycoprotein endo-beta-mannosidase OS=Lili... [more]
EBM_ARATH5.011e-3045.35Mannosylglycoprotein endo-beta-mannosidase OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_17B08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-17B08-C15-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672470 ID=CX672470; Name=CX672470; organism=Citrus sinensis; type=EST; length=850bp
TTGAAAATAGAAGTCACACCTAGATGTTTTGTCTTAAACAAACATCAAAA
TACAGGGGAAAGAAAGAAGTTGAACAAATAAACAAATAACTTGAATGTCC
TCTCCATTTGCACTGCTGCTTTATTTCCATAATCACCGAGAAATTTTAGA
AACAGTTTCAGGAGCAAGACAGGGCAATTATTTGTGTAAAAGTGGAGCCT
CAATTCTGAATTGTGAAAATTTTTGGCTCTAAGGTCTATTAGTAACAAAT
GTAGCTCTATACCTAACAACCCAGTTGAATCCGCAAGCTCGCATGCTATA
TAGATACTTAAAAAGAACTCTTACCAGCTCATAGTATAGTTTGACCGACA
TGGTAATTCCAGCCATGAAGAGTTACTTTTGGGGTGACACCGTGAGGGAC
CTCAAAAGAGATCTTGATGGGCATCACCTCACCTGGTGCAAGTGAAAAAT
AGTTGTCCGAGTAATGCACAGGAAGAATTCTTGTATCTTCTCCTTCCTTG
TGAGATTTACTCCAACCACGAACCGAGAAATGAAGGAAGAAAGCAACTCC
AGAATCAGTCCCATTCAATTCAGCTACCTTCAAACTATCAGTGTCCATGA
AATGTCTGCATATTCTCCTGAATAAACCAGCTTCTTGTTTTTCCTCAGTT
GCGCTATTTACAGGTTCTGTTGAGGCCATACTAAAATCACCATCAACAGG
TACAGTTGTGAAATTATTCTTATATGTTAAACGCTTAGGGTCCTGTTTCT
TAGATCTGTTGTGCACTTGCATCTCAACTTCATAAGTAGACCCTTTGATA
AAAATCTGTGACGTTAACTTGAGGGGGATATTCTTCTTCCTGTATGGCTC
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