CX077959

Overview
NameCX077959
Unique NameCX077959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX077959 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.464e-25
Identity = 90/225 (40.00%), Postives = 115/225 (51.11%), Query Frame = -1 
Query:  156 LKKKVRKLQLAAAGCSEDNSQYRDELASASSQQISRGQWERRLQTDIHMAKQALCAALSPDKASILSELKPANGFISYTKPAVQAPAYASSTENIAKLLKGWTRNAQKSASSNSGVTDQNSINNNVNHIAGAESASSEETPSKVASNSTGIELSEAFESLFGFESFDSSNSTDLSQ------SVTPESSTFQDYESKQLLLDPSAGADDDQMPQLSLLEKWLFDD 812
            LKKK+ KLQ    G  +D +   D     S + +S+GQWERRLQTDIHMAKQALC ALS DK S  ++  P    +  T+P     +  SS ENIA+LL+ W + +  +ASS S      S   + N+ +   S SS   PS+ A ++              F SF+SSNS  L                FQD ESK +L        D+QMP LSLLEKWL DD
Sbjct:  112 LKKKLEKLQSPENGKCQDGNSSVD-----SDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTSSSTD-DPKLSTVQTTQPRPFQASTYSSAENIARLLENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLSTSS---PSEGAIST-------------NFISFNSSNSDILEDHDQAKFEAATNGVNFQD-ESKPIL--------DNQMP-LSLLEKWLLDD 304
The following BLAST results are available for this feature:
BLAST of CX077959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MYB06_ANTMA3.464e-2540.00Myb-related protein 306 OS=Antirrhinum majus GN=MY... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_6A12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A12-A24-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077959 ID=CX077959; Name=CX077959; organism=Citrus sinensis; type=EST; length=812bp
GAACTGTAGAAGAGCAATTACACAATAATTAATAAACAGATCAAAAAGAG
TCTTTAATGAAAGCCCTAAAACCAGACGCAGCTCTCTCATCAGAACATAT
CAGTGTCCTCATGATCATCTAATTTAAGGTCATTAAGATAATCTTTCCCT
CCTTGATCATCAAAAAGCCACTTCTCAAGCAATGACAGCTGTGGCATTTG
ATCATCATCAGCACCAGCACTAGGATCTAATAACAATTGCTTGCTCTCAT
AATCTTGAAAAGTGCTAGACTCAGGGGTCACAGATTGAGATAAATCGGTA
GAATTTGACGAATCAAAAGACTCAAAACCAAACAACGATTCAAAAGCCTC
TGATAATTCTATGCCAGTACTGTTGCTTGCAACTTTGCTTGGAGTCTCTT
CACTAGAAGCAGATTCTGCCCCAGCAATGTGATTAACATTGTTATTAATT
GAATTCTGATCAGTAACACCTGAGTTCGAAGAAGCACTTTTTTGAGCGTT
TCTGGTCCACCCTTTGAGCAACTTAGCAATGTTCTCAGTGCTTGAAGCGT
AAGCTGGTGCTTGAACTGCTGGTTTTGTGTAGGAAATGAACCCATTAGCA
GGCTTCAATTCAGACAAAATACTCGCTTTATCTGGTGACAAGGCCGCACA
TAGAGCTTGCTTAGCCATGTGAATATCAGTCTGCAGCCTTCTCTCCCACT
GACCCCTTGAGATTTGCTGTGAAGAAGCTGAAGCTAGCTCATCTCTATAT
TGGCTATTATCTTCAGAGCAGCCAGCAGCAGCTAGTTGCAGCTTCCTCAC
CTTCTTCTTCAA
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