CX672441

Overview
NameCX672441
Unique NameCX672441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.995e-41
Identity = 82/97 (84.54%), Postives = 86/97 (88.66%), Query Frame = 2
Query:  443 TNAHQDSKKIKRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQ 733
            + A Q  KK KR RD S KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG +AILNFPELADS PRP SL+PRD+Q
Sbjct:   30 SKAEQSEKKTKRGRD-SGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQ 125          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.860e-37
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 2
Query:  458 DSKKIKRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQ 733
            + +K K ++D S KHPVYRGVR RNWGKWVSEIREPRKKSRIWLGTFP+PEMAARAHDVAALSIKG SAILNFP+LA S PRP+SL+PRD+Q
Sbjct:   20 EEEKKKPVKD-SGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQ 110          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.271e-34
Identity = 69/94 (73.40%), Postives = 78/94 (82.98%), Query Frame = 2
Query:  482 RDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQXXXXXXXQMD 763
            + +++K PVYRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+SIKG SAILNFPEL+  LPRP SL+PRDV+        MD
Sbjct:   10 KKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMD 103          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.581e-33
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 2
Query:  473 KRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQXXXXXXXQMD 763
            K+ ++++ +  VYRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMAARAHDVAALSIKG+SAILNFPELAD LPRP SL+ +D+Q        MD
Sbjct:   14 KKKKEKTKEKGVYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMD 110          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.748e-32
Identity = 69/104 (66.35%), Postives = 74/104 (71.15%), Query Frame = 2
Query:  452 HQDSKKIKRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQXXXXXXXQMD 763
            HQ        + +    P YRGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHD AAL+IKG SA+LNFPELA  LPRP S +PRDVQ        MD
Sbjct:   24 HQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMD 127          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 2
Query:  473 KRMRDQSS-------KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQ 733
            KR RD SS       +HPVYRGVRMR+WGKWVSEIR+PRKK+RIWLGTF T +MAARAHDVAAL+IKG+SA+LNFPELA   PRP S +P D+Q
Sbjct:   60 KRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQ 153          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.087e-32
Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = 2
Query:  473 KRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQ 733
            +R  +   KHP YRGVRMR+WGKWVSEIREPRKKSRIWLGT+PT EMAARAHDVAAL+IKG +A LNFP+LA  LPRP + +P+D+Q
Sbjct:   88 RRKTNGGDKHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKDIQ 174          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.644e-32
Identity = 68/91 (74.73%), Postives = 73/91 (80.22%), Query Frame = 2
Query:  461 SKKIKRMRDQSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQ 733
            S K K  +   SK P +RGVRMR WGKWVSEIREPRKKSRIWLGTF TPEMAARAHDVAAL+IKG SA LNFPELA  LPRP S  P+D+Q
Sbjct:   24 SSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQ 114          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.307e-31
Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 2
Query:  467 KIKRMRDQS-----SKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQ 733
            K KR +D       SKHP +RGVRMR WGKWVSEIREP+KKSRIWLGTF T EMAARAHDVAAL+IKG SA LNFPELA  LPRP S  P+D+Q
Sbjct:   26 KKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQ 119          
BLAST of CX672441 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.625e-31
Identity = 65/91 (71.43%), Postives = 75/91 (82.42%), Query Frame = 2
Query:  464 KKIKRMRDQSSKHPV-YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELADSLPRPNSLAPRDVQ 733
            K+ K      +K+P  YRGVRMR+WGKWVSEIREPRKKSRIWLGT+PT EMAARAHDVAAL+IKGNS  LNFPEL+  LPRP S +P+D+Q
Sbjct:   55 KRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQ 145          
The following BLAST results are available for this feature:
BLAST of CX672441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
DREB3_ARATH5.995e-4184.54Dehydration-responsive element-binding protein 3 O... [more]
TINY_ARATH6.860e-3780.43Ethylene-responsive transcription factor TINY OS=A... [more]
ERF43_ARATH9.271e-3473.40Ethylene-responsive transcription factor ERF043 OS... [more]
ERF42_ARATH1.581e-3371.13Ethylene-responsive transcription factor ERF042 OS... [more]
ERF37_ARATH1.748e-3266.35Ethylene-responsive transcription factor ERF037 OS... [more]
ERF36_ARATH3.895e-3271.28Ethylene-responsive transcription factor ERF036 OS... [more]
ERF34_ARATH5.087e-3272.41Ethylene-responsive transcription factor ERF034 OS... [more]
ERF39_ARATH6.644e-3274.73Ethylene-responsive transcription factor ERF039 OS... [more]
ERF38_ARATH4.307e-3172.34Ethylene-responsive transcription factor ERF038 OS... [more]
ERF35_ARATH5.625e-3171.43Ethylene-responsive transcription factor ERF035 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16H12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16H12-P24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672441 ID=CX672441; Name=CX672441; organism=Citrus sinensis; type=EST; length=820bp
CGACTCTGCTTTGCTATCTCCATTGAATAGTATTTATGTACGCATATCAA
TTCGTCATCAATCCTTTTGACGAAACACAAAAAACAGGTACTTGCTTTCA
TTGGCCATCTCTTTCCTCTAATTTGTTTCTAAACAACAAATTACAAGCCC
CTTCTCCCTCTCAGTTAACCTCCCTCCGAAACTTGACCTCCTCAGCTCTC
CCATTTATTCTTTGCTCTATTTTGCTTTCAAACAAAAATTTCCACTTCGC
CCCAAACTTTCTTCCTTGTCTTCATTTTAGTCCCTTTATTTTTTTTTAAT
GAACTGAATCCAAATAATAATCACCATCTTGTTAATAATCAGTTTCGTCA
AGAGTAGCGACATCAACAACGACTACAAGATGAGTGAACCGCAAAACTCA
TCGGAAGCAGAAAGCAGCTCGTCAAACTCATCATTGTCGCCAACAAATGC
TCATCAAGACTCCAAAAAGATCAAAAGAATGAGAGATCAATCAAGCAAGC
ACCCCGTTTATCGGGGCGTCCGGATGAGGAACTGGGGCAAATGGGTCTCC
GAAATCCGTGAGCCCCGCAAAAAATCCCGTATCTGGCTCGGCACTTTCCC
CACGCCCGAAATGGCCGCACGTGCGCATGACGTGGCTGCCTTGAGCATCA
AGGGCAACTCAGCAATCCTCAACTTCCCAGAACTCGCTGACTCGCTCCCA
CGTCCTAACTCTCTCGCCCCACGTGACGTCCAAGCCGCCGCTGCTAAGGC
TGCTCAAATGGACAAGTTTGACTCCTCGTCTTCATCTTCTCTGTCATCTT
TGGTTTCTGCTATGGATTTG
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