CX672438

Overview
NameCX672438
Unique NameCX672438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11165 contig Csv1_Contig11165:107..538. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 1.434e-63
Identity = 113/118 (95.76%), Postives = 118/118 (100.00%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK+RPASS+N+PFFTTNSGAPVWNNNSSMT+GPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+SNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKYRPASSYNSPFFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 2.289e-61
Identity = 109/118 (92.37%), Postives = 117/118 (99.15%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPY+ RP+S+FNAPF+TTNSGAPVWNNNSSMT+GPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD++NL+CADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYRHRPSSAFNAPFWTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITNLSCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.484e-60
Identity = 108/118 (91.53%), Postives = 117/118 (99.15%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK+RP+S+FN+PF+TTNSGAPVWNNN+S+T+G RGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVS+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKYRPSSAFNSPFWTTNSGAPVWNNNNSLTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.938e-60
Identity = 108/118 (91.53%), Postives = 116/118 (98.31%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYKFRP+SSF++PF+TTNSGAPVWNNNSS+T+G RGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S LTCADFLRAPGVQTP+IVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKFRPSSSFDSPFWTTNSGAPVWNNNSSLTVGARGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISQLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 3.305e-60
Identity = 107/118 (90.68%), Postives = 116/118 (98.31%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK RP+S+FN+PF+TTNSGAP+WNNNSS+T+G RGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPIWNNNSSLTVGARGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 9.616e-60
Identity = 107/118 (90.68%), Postives = 115/118 (97.46%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK+R +S+FN PF+TTNSGAPVWNNNSS+T+G RGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKYRSSSAFNTPFWTTNSGAPVWNNNSSLTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 9.616e-60
Identity = 107/118 (90.68%), Postives = 116/118 (98.31%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK+RP+S+ N+PF+TTNSGAPVWNNNSSMT+G RGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+++LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKYRPSSANNSPFWTTNSGAPVWNNNSSMTVGTRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 9.616e-60
Identity = 107/118 (90.68%), Postives = 115/118 (97.46%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK RP+S+FN+PF+TTNSGAPVWNNNSS+T+GPRG  LLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGPRGQYLLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.256e-59
Identity = 107/118 (90.68%), Postives = 115/118 (97.46%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK RP+S+FN+PF+TTNSGAPVWNNNSS+T+G RGPILLEDYHLVEKLA FDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGSRGPILLEDYHLVEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 118
[Close]
BLAST of CX672438 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.256e-59
Identity = 106/118 (89.83%), Postives = 116/118 (98.31%), Query Frame = -1 
Query:    1 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRD 354
            MDPYK RP+S+FN+PF+TTNSGAP+WNNNSS+T+G RGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTP+IVRFSTVIHERGSPETLRD
Sbjct:    1 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRD 118
The following BLAST results are available for this feature:
BLAST of CX672438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA2_ARATH1.434e-6395.76Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA1_CUCPE2.289e-6192.37Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA_PHAAU1.484e-6091.53Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA2_GOSHI1.938e-6091.53Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA4_SOYBN3.305e-6090.68Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA_SOLAP9.616e-6090.68Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA3_NICPL9.616e-6090.68Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA1_GOSHI9.616e-6090.68Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA_PEA1.256e-5990.68Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA3_SOYBN1.256e-5989.83Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16H09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16H09-P18-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672438 ID=CX672438; Name=CX672438; organism=Citrus sinensis; type=EST; length=432bp
ATCTCTCAGGGTTTCAGGGCTGCCACGCTCATGGATAACAGTGGAGAAGC
GGACAATGACAGGCGTCTGAACCCCTGGGGCTCGAAGGAAATCAGCACAA
GTAAGGTTAGAAACATCATGGGTGACCTCAAAGAAACCCTTAGCACTGGC
TCCCCTGGCATGGACAACACGTTCTGGAATCCGCTCCCTATCAAAATTTG
CAAGTTTCTCCACTAGATGATAATCCTCAAGGAGGATTGGACCTCTAGGT
CCAATCGTCATTGATGAGTTGTTGTTCCATACCGGAGCGCCGGAATTGGT
GGTAAAGAAGGGGGCGTTGAAAGAACTGGCAGGGCGGAACTTGTATGGAT
CCATAGCGGGAGGGAAGCAGAAAAAAAGATTGAACGAGAAGCTACACTAC
GAGAAAGAAAAAGAGAGAGTAGACAAATGCCT
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