CX672436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672436 vs. ExPASy Swiss-Prot
Match: RBM39_PONAB (RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 399 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 686 ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+ Sbjct: 417 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 513
BLAST of CX672436 vs. ExPASy Swiss-Prot
Match: RBM39_MOUSE (RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 399 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 686 ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+ Sbjct: 423 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
BLAST of CX672436 vs. ExPASy Swiss-Prot
Match: RBM39_HUMAN (RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 399 SECLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 686 ++C L NMF+P+ E +D +IK+DV EC+K G + HI+V+K+SA G VY++ + +A AA ALHGRWFAGKMITA ++ TY FPDS+ Sbjct: 423 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 519
BLAST of CX672436 vs. ExPASy Swiss-Prot
Match: RSD1_SCHPO (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe GN=rsd1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.013e-14 Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 393 VPSECLLLKNMFDPKNETYEEFDMDIKEDVEGECS-KFGKLKHIFVEKDSAGFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDS 683 + S C LL+NMF+P ET + ++++DV+ EC K+GK+ HI V + G ++++FEN A A LH RWF G+ I A+ + Y KFP++ Sbjct: 504 IRSRCALLENMFNPAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAEKAITGLHQRWFGGRTIKASILPETDYYFKFPNA 601
BLAST of CX672436 vs. ExPASy Swiss-Prot
Match: MAN1_HUMAN (Inner nuclear membrane protein Man1 OS=Homo sapiens GN=LEMD3 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11 Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 405 CLLLKNMFDPKNETYEEFDMDIKEDVEGECSKFGKLKHIFVEKDSA-GFVYLRFENTQSAFAAQRALHGRWFAGKMITATFMVPQTYEAKFPDSI 686 CL ++NMFDP E +++ + I+E + +CS + HI V+K+S G VY++ + + A A +ALHG WF GK++T ++ Y +FP ++ Sbjct: 785 CLKIRNMFDPVMEIGDQWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKCLSPEYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQAL 879 The following BLAST results are available for this feature:
BLAST of CX672436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672436 ID=CX672436; Name=CX672436; organism=Citrus sinensis; type=EST; length=740bpback to top |