CX672420

Overview
NameCX672420
Unique NameCX672420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10993 contig Csv1_Contig10993:574..1126. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 1.854e-48
Identity = 92/122 (75.41%), Postives = 101/122 (82.79%), Query Frame = -2
Query:  187 CKEKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVKGYVY 552
            CK++A P+QV++Y LKLL RRIPPAVPGIMFL GGQ EV AT NLN MNQGPNPWHV F YARA QN CLKTWGG+PENVKAAQD L  RAKANSL QLGKY  +GE+  AK+GMFVK YVY
Sbjct:  267 CKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.422e-48
Identity = 93/121 (76.86%), Postives = 98/121 (80.99%), Query Frame = -2
Query:  187 KEKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVKGYVY 549
            K++A P+QVA Y LKLL  R+PPAVPGIMFL GGQ EV ATLNLN MNQ PNPWHV F YARA QN CLKTWGGRPENV AAQ  L  RAKANSL QLGKY GEGESE AK+GMFVKGY Y
Sbjct:  278 KDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.422e-48
Identity = 93/120 (77.50%), Postives = 99/120 (82.50%), Query Frame = -2
Query:  187 EKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVKGYVY 546
            ++A P+QVA Y LKLL  RIPPAVPGIMFL GGQ E+ ATLNLN MNQ PNPWHV F YARA QN CLKTWGG+ ENVKAAQDIL  RAKANSL QLGKY GEGESE AK+GMFVKGY Y
Sbjct:  280 DRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 5.583e-45
Identity = 90/121 (74.38%), Postives = 97/121 (80.17%), Query Frame = -2
Query:  187 KEKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVKGYVY 549
            K+KA P +VAEY L LL RRIPPAVPGIMFL GGQ EV ATLNLN MN+ PNPWHV F YARA QN  LKTWGG PENVKAAQ+ L  RAK+NSL QLGKY G+GESE AKK +FVKGY Y
Sbjct:  236 KDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.520e-42
Identity = 82/121 (67.77%), Postives = 93/121 (76.86%), Query Frame = -2
Query:  187 KEKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVKGYVY 549
            K KA P+ VA++ L +L RR+PPAVPGIMFL GGQ E  ATLNLN MNQ PNPWHV F YARA QN  L+TW G+PE ++A+Q  L  RAKANSL QLGKY  EGE+E AKKGMFVKGY Y
Sbjct:  271 KNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.287e-41
Identity = 87/121 (71.90%), Postives = 94/121 (77.69%), Query Frame = -2
Query:  187 KEKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVKGYVY 549
            K+KA P +VAEY L LL RRIPPAVPGIMFL GGQ EV ATLNLN MN+ PNPWHV F YARA QN  LKTWGG PENVKAAQ+ L  RAK+NSL QLGKY G+GESE AKK    +GY Y
Sbjct:  230 KDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 2.512e-37
Identity = 83/115 (72.17%), Postives = 86/115 (74.78%), Query Frame = -2
Query:  199 KAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVK 543
            K PP+QVA+YPLKLL RR  P VPGIM L GGQ EV ATLNLN MNQ PNPWHV F YARA QN CLKTW    ENVK AQD  F  AK+NSL QLGKY GEGESE  KK MFVK
Sbjct:  278 KGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVK-AQD--FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.609e-29
Identity = 70/124 (56.45%), Postives = 80/124 (64.52%), Query Frame = -2
Query:  187 CKEKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFV--KGYVY 552
            CK KA P +VAEY LK+L  R PP VPGIMFL GGQ E+ +TLNLN MNQ PNPWHV F YARA  N  LKTW   P  V+A + +     KANS  Q GKY    E + A +GM+   KGYVY
Sbjct:  253 CKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPR-LAAQARKANSDAQQGKYDATTEGKEAAQGMYEKGKGYVY 374          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.900e-26
Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = -2
Query:  187 CKEKAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQGPN-PWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGESEGAKKGMFVKGYVY 552
            C  KA  +Q+ ++ ++ L R +PPA+ G++FL GGQ E+ AT NLN MN  PN PW + F Y RA Q   + TW G   NV+AA+ +   RAK NSL QLGKY GE  +  A + ++VK Y Y
Sbjct:  235 CPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CX672420 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.417e-25
Identity = 60/122 (49.18%), Postives = 75/122 (61.48%), Query Frame = -2
Query:  187 KAPPQQVAEYPLKLLPRRIPPAVPGIMFLFGGQFEVGATLNLNPMNQ--GPNPWHVFFFYARAFQNPCLKTWGGRPENVKAAQDILFPRAKANSLVQLGKYPGEGE-SEGAKKGMFVKGYVY 543
            K  P+ VAE+ ++ L R +P AVP ++FL GGQ E  AT+NLN +NQ  G  PW + F + RA Q   LK W G+ ENVK AQD L  RAKANS   LG Y G  +  EGA + + VK Y Y
Sbjct:  238 KVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
The following BLAST results are available for this feature:
BLAST of CX672420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALFC_ORYSJ1.854e-4875.41Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_ARATH2.422e-4876.86Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH2.422e-4877.50Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC1_PEA5.583e-4574.38Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC3_ARATH1.520e-4267.77Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_PEA1.287e-4171.90Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_SPIOL2.512e-3772.17Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE5.609e-2956.45Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI9.900e-2646.34Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_CICAR6.417e-2549.18Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16G11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16G11-N22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672420 ID=CX672420; Name=CX672420; organism=Citrus sinensis; type=EST; length=553bp
TTTTTTTTTTTTTTTTTACCCACTAACTCATCTCATTGGCAAAAAGTTTA
TTAAGTTGCTAAAAGTACATGTAATCATGAACAAAAATAGTCCCCAAAGC
ACGGCTATAAAGCATTAACACATTTGAAATGACTACCCATTTCAAATTTC
TTCACCATTATTATGATCTTCGGGCTAACAAATTTAGTAAACGTAGCCCT
TGACAAACATTCCTTTCTTGGCCCCCTCTGATTCCCCCTCCCCAGGGTAC
TTGCCGAGCTGAACAAGGGAGTTGGCCTTGGCACGGGGGAACAAAATATC
CTGAGCTGCCTTGACATTCTCTGGCCTGCCCCCCCATGTCTTCAGGCAGG
GGTTTTGGAAAGCTCTGGCATAAAAAAAAAAAACGTGCCATGGGTTGGGA
CCTTGGTTCATGGGGTTCAAGTTGAGGGTTGCCCCAACCTCAAATTGCCC
ACCAAACAAAAACATGATTCCGGGGACAGCTGGAGGGATTCTCCTGGGAA
GGAGCTTGAGTGGGTACTCAGCAACCTGTTGGGGGGGGGCCTTCTCCTTG
CAT
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