CX672344

Overview
NameCX672344
Unique NameCX672344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10071 contig Csv1_Contig10071:40..778. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.030e-41
Identity = 105/252 (41.67%), Postives = 130/252 (51.59%), Query Frame = 1
Query:   85 VASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSN--GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDF 738
            VA  AD++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE   + GE+KYCATSLESM+DF
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDF 268          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38
Identity = 76/118 (64.41%), Postives = 91/118 (77.12%), Query Frame = 1
Query:  385 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDF 738
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P  +GE+K CATSLESM+DF
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDF 302          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 1
Query:  388 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDF 738
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P  KGE+K CATSLESM+DF
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDF 198          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 1
Query:  448 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDF 738
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE     GE K CATSLESM++F
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEF 117          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21
Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 1
Query:  439 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDF 738
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P  KGE+K CATSLES++DF
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDF 456          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20
Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = 1
Query:  400 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE----QKYCATSLESMIDF 738
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE   + GE    + YCATSLESM++F
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEF 158          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = 1
Query:  424 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE-----QKYCATSLESMID 735
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE   I  E     + YCATSLESM++
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVE 160          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.231e-19
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  424 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP--GIKGEQKYCATSLESMIDF 738
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE    G + + K+C TSLESM++F
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEF 189          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  460 TALFFLEKDLHPGMKMNLHFTQTSNGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMID 735
            T +FF E+ +  G ++  HF   +  A  FL RQ A S PF++  LP I   F +   S     M+ T++ CE P I GE K+CATSLE++++
Sbjct:  139 TTVFFHEEAVRVGRRLPFHFPPATPAALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVE 231          
BLAST of CX672344 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12
Identity = 35/93 (37.63%), Postives = 57/93 (61.29%), Query Frame = 1
Query:  460 TALFFLEKDLHPGMKMNLHF-TQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMID 735
            T +FF E+ +  G ++  +F   T++   FL R+ A S PF++  LP +   F V P + EA  M+ T++ CE P + GE K+CATSLE++++
Sbjct:  187 TTVFFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVE 279          
The following BLAST results are available for this feature:
BLAST of CX672344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
RD22_ARATH5.030e-4141.67Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ2.336e-3864.41BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP5_ORYSJ3.066e-2247.86BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP6_ORYSJ4.004e-2254.64BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURPH_ORYSJ9.862e-2151.92BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP1_ORYSJ3.748e-2046.15BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP2_ORYSJ4.895e-2047.71BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP8_ORYSJ9.231e-1949.07BURP domain-containing protein 8 OS=Oryza sativa s... [more]
RAF1B_WHEAT4.906e-1238.71Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURPD_ORYSJ6.407e-1237.63BURP domain-containing protein 13 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672344 ID=CX672344; Name=CX672344; organism=Citrus sinensis; type=EST; length=739bp
ATTCTGGGTGTCTTTTAAAACATACTCAAAGCTATAATGGAGTTTCACTT
GTTGCCCATCCTTGCTTTCCTCAGTCTAGCACTGGTAGCAAGTCATGCTG
ACATTTCTCCTGAGCTTTACTGGAAAACTGTACTGCCAAATTCCCCGATG
CCAAAAGCTGTCAAAGATCTTCTACAGCCAGATGTGCTGGAAGACAAAAG
CACCTCTGTCAACGTAGGGAAGGGTGGTGTCAATGTGGATGCAGGGAAAG
GAAAGCCCGGTGGTGGCACCCATGTGAATGTTGGGGGTAAGGGCGTTGGT
GTAAACACTGGAAAGCCTGACAAAAGAACCAGTGTTGGTGTTGGCAAAGG
AGGAGTATCCGTAAGTACAGGACACAAGGGAAAGCCAGTTTATGTTGGAG
TAAGCCCATTCAACTATGTATATGCTGCAAATGAGAACCAACTCCATGAT
GACCCGAATACAGCTCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGCAT
GAAGATGAACTTGCACTTCACTCAAACTTCAAATGGAGCAACTTTCTTAT
CTCGCCAAGCTGCCAAATCAACTCCTTTCTCGTCTGACAAATTGCCTGAG
ATCTTTAACCAGTTTTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAAT
GCAGAACACAATCAAAGAGTGTGAAGACCCTGGCATTAAAGGAGAGCAGA
AATATTGTGCAACTTCACTGGAGTCAATGATTGACTTCA
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