CX672343

Overview
NameCX672343
Unique NameCX672343
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10071 contig Csv1_Contig10071:528..1398. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.316e-65
Identity = 127/205 (61.95%), Postives = 152/205 (74.15%), Query Frame = -2
Query:  268 GMKMNLHFTQTSN--GAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTIAA-GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 864
            G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE   + GE+KYCATSLESM+DFS SKLGK  V+A+STEV KK   MQ Y IAA GVK+++ DKSVVCHKQ YP+AVFYCH    T  Y VPLEG +G +AKA AVCH +TSAWNP HLAF+VLKVKPGTVP+CHFLPE H+VW
Sbjct:  185 GKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVCHFLPETHVVW 389          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.828e-65
Identity = 124/207 (59.90%), Postives = 153/207 (73.91%), Query Frame = -2
Query:  268 HPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEV-KKGTKMQTYTIAAGVKQMAA----DKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 870
            HPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P  +GE+K CATSLESM+DF+TS LG S V+A ST V K+G+  Q YT+ A VK+ AA    D+ V CH + Y YAVF CH T+ TRAY V + G DGT  +A AVCH DT+ WNPKH+AFQVLKVKPGTVP+CHFLP+DH+VW
Sbjct:  220 HPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTVTA-VKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAVSMAGRDGTGVEAVAVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVW 425          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 8.845e-54
Identity = 104/200 (52.00%), Postives = 131/200 (65.50%), Query Frame = -2
Query:  268 MNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV--KKG-TKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 855
            + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P  KGE+K CATSLESM+DF  S LG + ++A ST +  K G T  Q YT+    +     + + CH ++YPYAVF CH T+ TRAY   L G DG   +A AVCHTDT+ WNPKH AFQVL VKPGTVP+CHF+  D +VW
Sbjct:  121 IKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAVEAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVW 320          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.409e-51
Identity = 110/211 (52.13%), Postives = 140/211 (66.35%), Query Frame = -2
Query:  268 GMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAIST-----EVKKGTKMQTYTIAAGVKQMAADKSVV-CHKQNYPYAVFYCHATQ-TTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVW 864
            G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P  KGE+K CATSLES++DF TS  G S V A ST      V+  +  Q YT++ GV++MA    ++ CH ++YPYAVF CH T+ TTRAY   L G DGT  +A AVCHTDTS WNP+H AF VL VKPGTVP+CHF+  D +VW
Sbjct:  372 GKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTVS-GVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAYKASLVGKDGTAVEAVAVCHTDTSDWNPEHAAFHVLGVKPGTVPVCHFMQPDAVVW 581          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.047e-46
Identity = 103/207 (49.76%), Postives = 131/207 (63.29%), Query Frame = -2
Query:  259 PGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKG--TKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 867
            PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE     GE K CATSLESM++F+ S LG + V A+STEV +   T  Q Y + A     ++    V CH   Y YAVF CH T T  AY V L GADGTKA+A A CHTD +    +  A++ L V PG+VP+CHFLP+D ++WV N
Sbjct:   36 PGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHTT-TAAAYTVTLAGADGTKAEALAACHTDAAPRVAE--AYKRLGVAPGSVPVCHFLPQDDMLWVRN 239          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.024e-43
Identity = 88/208 (42.31%), Postives = 122/208 (58.65%), Query Frame = -2
Query:  253 GMKMNLHFTQTSNGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKK 864
            G ++  HF   +  A  FL RQ A S PF++  LP I   F +   S     M+ T++ CE P I GE K+CATSLE++++ +   LG + ++ + ST  + G  +QTYT+ A          V CH + YPY V+ CH T  +RAY V +EGA G  A   AAVCHTDTS WNP+H++F++L  KPG  P+CH +P  HI+W  N K
Sbjct:  151 GRRLPFHFPPATPAALGFLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYTVDMEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKNVK 358          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.034e-41
Identity = 85/206 (41.26%), Postives = 120/206 (58.25%), Query Frame = -2
Query:  259 GMKMNLHFTQTSNGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKA-AAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 864
            G ++   F   +  A  FL RQ A S PF++  LP +   F V   S     M+ T++ CE P I GE K+CATSLE++++ +   LG + ++ + ST  + G  +QTYT+ +          V CH + YPY V+ CH T  +RAYMV +EGA G  A   A VCHTDTS WNP+H++F++L  KPG  P+CH +P  HI+W  N
Sbjct:  178 GKRLPFRFPPATPAALGFLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDMEGARGGDAVTIATVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIWAKN 383          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.913e-40
Identity = 88/212 (41.51%), Postives = 128/212 (60.38%), Query Frame = -2
Query:  250 GMKMNLHF-TQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEG---ADGTKA-KAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPNKKT 864
            G ++  +F   T++   FL R+ A S PF++  LP +   F V P + EA  M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST  + G  +Q Y + A V  +     V CH Q YPY V+ CH T   RAYMV +EG    DG +A   A VCHT+TS WNP+H++F++L  KPG  P+CH +P  HIVW  N K+
Sbjct:  199 GERLPFYFPAATTSALGFLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRA-VLPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEMEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIVWAKNVKS 409          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.161e-37
Identity = 93/212 (43.87%), Postives = 125/212 (58.96%), Query Frame = -2
Query:  259 PGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP--GIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV----KKGTKMQTYTIAA--GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHLAFQVLKVKPGTVPICHFLPEDHIVWVPN 867
            PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE    G + + K+C TSLESM++F+ + LG + ++A+STEV       T  Q YT+ A   V  ++    V CH   Y YAVF CH T T  AY V L GADGT+A+A A CH D  A+     A++ + V  G+VP+CH +P   ++WV N
Sbjct:  106 PGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEAVKPVVSVSGGNMVTCHGMPYAYAVFGCHTT-TATAYAVTLAGADGTRAEALATCHGD--AFPGVAEAYERVGVAAGSVPVCHIMPLGDMLWVRN 314          
BLAST of CX672343 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.980e-37
Identity = 94/214 (43.93%), Postives = 120/214 (56.07%), Query Frame = -2
Query:  259 PGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDPGIKGE-----QKYCATSLESMIDFSTSKLG-KSVQAISTEVKK---GTKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYMVPLEGADGTKAKAAAVCHTDTSAWNPKHL-AFQVLKVKPGTVPICHFLPEDHIVWVPN 867
            PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE   I  E     + YCATSLESM++   S LG + V A+STEV      T  Q Y + A     +     V CH+  Y YAVF  H  +   AY V L GADGT A+A A CH D          A++ L V PG V +CHFLP+D ++WV N
Sbjct:   75 PGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEAVRPVPVPGGDMVACHRMPYAYAVFGVHGIKGA-AYTVTLAGADGTMAEAVAACHGDVDGHGVAVAEAYKRLGVAPGKVAVCHFLPQDDMLWVRN 287          
The following BLAST results are available for this feature:
BLAST of CX672343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
RD22_ARATH1.316e-6561.95Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ3.828e-6559.90BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP5_ORYSJ8.845e-5452.00BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ2.409e-5152.13BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP6_ORYSJ3.047e-4649.76BURP domain-containing protein 6 OS=Oryza sativa s... [more]
RAF1B_WHEAT7.024e-4342.31Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
RAF1A_WHEAT5.034e-4141.26Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURPD_ORYSJ1.913e-4041.51BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP8_ORYSJ1.161e-3743.87BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURP2_ORYSJ1.980e-3743.93BURP domain-containing protein 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672343 ID=CX672343; Name=CX672343; organism=Citrus sinensis; type=EST; length=871bp
GATCACAGGGATTTCTAATAGATTCACCAGCCAGCCGCAAAGTAAGACTG
TGAAGATAGCTCCATAAGTAGATAAGATAAATACTAGGCACACAAGTTTT
GAAGTACAGCAAGCTTAATGTATGCATAACAAATTGAACTGGGTATTCAA
AGTAAATTATTGTACAACTAAATGGATAACTGCTTGAACTGACTGATTCA
AACTCTGCTGATTAAGTAGATGGGATAAGAGGATCAAATTCTATTCTCCA
GTCTTCTTATTGGGAACCCAGACAATGTGATCCTCAGGAAGGAAGTGACA
TATAGGAACAGTTCCTGGCTTAACTTTGAGCACTTGAAAAGCTAAATGCT
TGGGGTTCCATGCTGATGTATCTGTGTGGCAGACTGCTGCTGCTTTGGCT
TTTGTCCCATCAGCACCTTCCAAGGGAACCATGTAAGCCCTTGTGGTTTG
TGTTGCATGGCAGTAGAATACAGCATATGGATAGTTCTGCTTATGGCACA
CTACTGATTTGTCAGCTGCCATCTGCTTCACTCCAGCTGCGATTGTATAT
GTCTGCATCTTGGTTCCTTTTTTTACCTCCGTAGAAATTGCCTGAACACT
CTTTCCAAGCTTAGAAGTGCTGAAGTCAATCATTGACTCCAGTGAAGTTG
CACAATATTTCTGCTCTCCTTTAATGCCAGGGTCTTCACACTCTTTGATT
GTGTTCTGCATTATTTCAGCTTCAACTGATCCAGGTTTCACGGAAAACTG
GTTAAAGATCTCAGGCAATTTGTCAGACGAGAAAGGAGTTGATTTGGCAG
CTTGGCGAGATAAGAAAGTTGCTCCATTTGAAGTTTGAGTGAAGTGCAAG
TTCATCTTCATGCCAGGATGC
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