CX672291

Overview
NameCX672291
Unique NameCX672291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3092 contig Csv1_Contig3092:15..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.649e-52
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = -2
Query:  361 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSKFAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 864
            DAAKG+EYLH GC P+IIHRD KSSNILLD +MRAKVSDFGLS+   +  +HVSS+ +GTVGYLDPEYY SQQLT+KSDVYSFGV+L EL+SG++ +S E FG    NIV WA+  I  GD+ GIIDP +     I+S+W++AE A  CV   GH RP + EV+  IQ
Sbjct:  711 DAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPEL-NIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQ 877          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.878e-42
Identity = 82/169 (48.52%), Postives = 120/169 (71.01%), Query Frame = -2
Query:  361 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 864
            DAA G+EYLH GCVP ++HRD K++NILLD+H++AK++DFGLS+ F +    +VS++V GT GYLDPEYY +  LT+KSD+YSFG++LLE+IS +  I   +      +IV+W    I  GD++ I+DP+L  +YDI S+WK  E A+ CV      RP++S V+ +++
Sbjct:  682 DAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSR---EKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVVNELK 847          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.677e-42
Identity = 85/169 (50.30%), Postives = 118/169 (69.82%), Query Frame = -2
Query:  361 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 864
            DAA G+EYLH+GC P I+HRD KSSNILLD  ++AK++DFGLS+ F +   SHVS++V GT GYLD EYY + +L++KSDVYSFGV+LLE+I+ +  I + +   +  +I +W KL +  GDI  I+DP L   YD  S WK  E A+ CV P    RP++S V+ +++
Sbjct:  672 DAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNR---DMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELK 837          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.234e-41
Identity = 79/168 (47.02%), Postives = 121/168 (72.02%), Query Frame = -2
Query:  364 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 864
            ++A+G+EYLH GC P ++HRD K++NILL++H+ AK++DFGLS+ F ++G +HVS++V GT GYLDPEYY +  L +KSDVYSFG++LLE+I+ Q  I+  +      +I +W  L +  GDIQ I+DP L  +YD  S+W+  E A+ C+ P    RP++S+V+ ++
Sbjct:  697 ESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSR---EKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIEL 861          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.917e-41
Identity = 93/169 (55.03%), Postives = 120/169 (71.01%), Query Frame = -2
Query:  361 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 864
            DAAKG++YLH G  P IIHRD KSSNILLDK M AKVSDFGLSK F    ASH++++V+GT GYLDPEYY + QLT+KSDVYSFGV+LLELI G+E +S+     +  N+V WA+ +++ G  + I+D  L + +D  SM K A  A+ CV      RPSI+EVL  ++
Sbjct:  712 DAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSG-SPDSFNLVLWARPNLQAGAFE-IVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLK 878          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.810e-41
Identity = 81/168 (48.21%), Postives = 117/168 (69.64%), Query Frame = -2
Query:  364 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDI 864
            +AA+G+EYLH GC P ++HRD K++NILL++   AK++DFGLS+ F VDG SHVS++V GT GYLDPEYY +  L++KSDVYSFGV+LLE+++ Q      +      +I +W    +  GDI+ I+DP L+ +YD    WKI E AL CV P  + RP+++ V+ ++
Sbjct:  670 EAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTR---ERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTEL 834          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.810e-41
Identity = 80/169 (47.34%), Postives = 121/169 (71.60%), Query Frame = -2
Query:  361 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 864
            +AA+G+EYLH GC P ++HRD K++NILL++H   K++DFGLS+ F ++G +HVS++V GT+GYLDPEYY +  LT+KSDVYSFGV+LL +I+ Q  I   +     R+I +W    +  GDI+ I DP+LL +Y+  S+WK  E A+ C+ P    RP++S+V+ +++
Sbjct:  682 EAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNR---EKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELK 847          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.499e-41
Identity = 89/201 (44.28%), Postives = 125/201 (62.19%), Query Frame = -2
Query:  265 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQXXXXXXXXXXXXXDGNSDDMSRNSLHSSLNMG 864
            + A+G+EYLH+GC P +IHRD KS NILLD + +AK+ DFGLS+ F V   +HVS+ V G+ GYLDPEYY +  LT+KSDV+SFGV+LLE+I+ Q  I   +      +I +W    +  GDI+ I+DPS+  +YD  S+WK  E A+ CV P    RP++S+V  ++Q              G  D  S++SL  S + G
Sbjct:  696 ETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTR---EKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQ---ECLLTENSRKGGRHDVDSKSSLEQSTSFG 890          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.488e-41
Identity = 78/169 (46.15%), Postives = 120/169 (71.01%), Query Frame = -2
Query:  361 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 864
            +AA G+EYLH GC P I+HRD K++NILLD+ ++AK++DFGLS+ F + G +H+S++V GT GYLDPEYY + +L +KSDVYSFG++LLE+I+ Q  I   +   +  +I QW    +  GDI  I+DP+L  +Y+ +S+W++ E A+ C  P    RP++S+V  +++
Sbjct:  684 EAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSR---SKSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELK 849          
BLAST of CX672291 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.488e-41
Identity = 82/170 (48.24%), Postives = 118/170 (69.41%), Query Frame = -2
Query:  361 DAAKGIEYLHMGCVPAIIHRD*KSSNILLDKHMRAKVSDFGLSK-FAVDG-ASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNEKFGANCRNIVQWAKLHIETGDIQGIIDPSLLDEYDIQSMWKIAEKALMCVLPHGHMRPSISEVLKDIQ 864
            +AA G+EYLH GC PA++HRD KS+NILLD+  +AK++DFGLS+ F V G  S VS++V GT+GYLDPEYY++ +L++KSDVYSFG++LLE+I+ Q  I   +      NI +W    I+ GD   I+DP L   YD  S+W+  E A+ C  P    RP++S+V+ +++
Sbjct:  671 EAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENP---NIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLK 837          
The following BLAST results are available for this feature:
BLAST of CX672291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y1677_ARATH1.649e-5261.31Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH5.878e-4248.52Probable leucine-rich repeat receptor-like protein... [more]
Y1756_ARATH7.677e-4250.30Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH2.234e-4147.02Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y5487_ARATH2.917e-4155.03Probable LRR receptor-like serine/threonine-protei... [more]
Y5188_ARATH3.810e-4148.21Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH3.810e-4147.34Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH6.499e-4144.28Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH8.488e-4146.15Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH8.488e-4148.24Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16B02-D4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672291 ID=CX672291; Name=CX672291; organism=Citrus sinensis; type=EST; length=865bp
TTTTTTTGATACCGAAAAATGACCAAATAATTAGCAAGCCCAATAAATTT
ACAAGTTCATGACATGCAGACATGGTGGATCTAAACTTACATGAGGCAAC
TTAGATAGATTTTAGCTATGTAATTCTAGCTACAACAAAGAATAAGACCA
GAGAATGGGAAAAGAAAAGGGAATTTTTTGCTTGTACAAGAACTAGAACT
ATCGAGCACTTGGTCGAACAATGGACTCGTCTAATGACAGGAAGTTCTCA
GTACCACCAAAGGAACCCATGTTGAGAGAAGAATGAAGGGAATTCCTAGA
CATATCATCTGAGTTACCATCTCTGGCTGCTGCAGCTTCCCTTTCAATCA
CGATAGCATCTTGGATGTCCTTGAGAACTTCTGATATTGATGGTCTCATA
TGTCCGTGAGGCAGAACACACATCAAAGCTTTTTCCGCTATCTTCCACAT
TGACTGGATGTCGTATTCATCTAGTAGAGATGGATCAATGATTCCTTGAA
TGTCACCAGTCTCGATGTGTAGCTTTGCCCATTGGACTATGTTACGGCAA
TTGGCACCAAACTTTTCGTTGGATATAGCTTCCTGACCAGATATCAACTC
AAGAAGAATGACACCAAAACTATAAACGTCACTCTTGTCCGTTAACTGCT
GGGAGATGTAGTACTCAGGATCTAGATATCCTACAGTGCCCCGTACTATG
CTTGACACATGAGAGGCTCCATCCACTGCAAATTTTGATAGACCAAAATC
CGAAACCTTTGCTCTCATGTGTTTGTCAAGAAGAATATTGCTGCTTTTTT
AATCTCTATGGATAATGGCTGGAACACAGCCCATGTGAAGGTACTCAATT
CCTTTCGCAGCATCT
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