CX672286
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y3638_RHIEC (UPF0176 protein RHE_CH03638 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=RHE_CH03638 PE=3 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.509e-38 Identity = 67/100 (67.00%), Postives = 88/100 (88.00%), Query Frame = -2 Query: 381 RVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCY 680 +VAMYCTGGIRCEKA++F+ +EGF+EVYHL+GGILKYLEEVP++ESLWEG CFVFD+RVSVEHGL +G +LC+ C+ P++ ++ SPL+E GV+C +CY Sbjct: 179 KVAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWEGACFVFDERVSVEHGLKEGEHRLCHACRNPITSEEITSPLYEEGVSCSHCY 278
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y6152_NOSP7 (UPF0176 protein Npun_F6152 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F6152 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.573e-38 Identity = 69/116 (59.48%), Postives = 93/116 (80.17%), Query Frame = -2 Query: 381 EITDKEVGSPEKRMPKRVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCY 728 E D V + + K+VA++CTGGIRCEKASSF+L++GF EVYHL+GGILKYLEEVP +ESLW+GECFVFD+RV+V HGL +G+++LC+ C P+S+ D SP +E G++C YC+ Sbjct: 159 EFPDYVVHNLDPTKHKKVALFCTGGIRCEKASSFMLAQGFAEVYHLKGGILKYLEEVPAQESLWQGECFVFDERVAVSHGLEEGSYELCFCCGYPISEEDKISPKYEQGISCAYCF 274
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y3401_RHILW (UPF0176 protein Rleg2_3401 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=Rleg2_3401 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.488e-38 Identity = 65/100 (65.00%), Postives = 88/100 (88.00%), Query Frame = -2 Query: 381 RVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCY 680 ++AMYCTGGIRCEKA++F+ +EGF+EVYHL+GGILKYLEEVP++ESLW+G CFVFD+RVSVEHGL +G +LC+ C+ P++ ++ SPL+E GV+C +CY Sbjct: 179 KIAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACFVFDERVSVEHGLKEGEHRLCHACRNPITAEEITSPLYEEGVSCSHCY 278
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y4166_RHIL3 (UPF0176 protein RL4166 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=RL4166 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.779e-38 Identity = 66/100 (66.00%), Postives = 87/100 (87.00%), Query Frame = -2 Query: 381 RVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCY 680 +VAMYCTGGIRCEKA++F+ +EGF+EVYHL+GGILKYLEEVP++ESLW+G CFVFD+RVSVEHGL +G +LC+ C+ P++ + SPL+E GV+C +CY Sbjct: 179 KVAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACFVFDERVSVEHGLKEGEHRLCHACRNPITAEETTSPLYEEGVSCSHCY 278
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y2319_METFK (UPF0176 protein Mfla_2319 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=Mfla_2319 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.439e-37 Identity = 65/101 (64.36%), Postives = 85/101 (84.16%), Query Frame = -2 Query: 381 KRVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCY 683 K+VAM+CTGGIRCEKASS++L +GF+EVYHL+GGILKYLE +P++ESLWEGECFVFD+RV+V+HGL G + C+ C+ P+S ADM S + G++CP CY Sbjct: 171 KKVAMFCTGGIRCEKASSYMLEQGFKEVYHLQGGILKYLETIPEEESLWEGECFVFDQRVAVKHGLQVGDYDQCFACRHPISAADMASSKYVKGISCPRCY 271 HSP 2 Score: 22.7126 bits (47), Expect = 2.439e-37 Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = -3 Query: 293 RKRGLEHDKDNSRLGALLVVLTK 361 R+RG EH DN+R +L+ L+K Sbjct: 293 RQRGEEHIGDNARQYSLIHKLSK 315
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y1496_SYNP2 (UPF0176 protein SYNPCC7002_A1496 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1496 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.853e-37 Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = -2 Query: 384 RVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYC 680 +VAM+CTGGIRCEKA+S+LL++GF+EVYHL+GGILKYLEE+P ESLWEGECFVFD+RV+V+HGL G ++LCY C P+ D S +E GV+CPYC Sbjct: 172 KVAMFCTGGIRCEKATSYLLNQGFQEVYHLKGGILKYLEEIPVAESLWEGECFVFDERVTVKHGLETGHYELCYACGHPIDAEDKTSAAYEIGVSCPYC 270
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y2887_RHIME (UPF0176 protein R02887 OS=Rhizobium meliloti GN=R02887 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.278e-37 Identity = 65/100 (65.00%), Postives = 85/100 (85.00%), Query Frame = -2 Query: 381 RVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCY 680 ++AMYCTGGIRCEKA++F+ +GFEEVYHL+GGILKYLEE+P +ESLWEG CFVFD+RVSV HGL +G LC+ C+QP++ D++SPL E GV+C +C+ Sbjct: 185 KIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACFVFDERVSVTHGLQEGEHTLCHACRQPLTPEDLQSPLHEEGVSCIHCH 284
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y2825_ANAVT (UPF0176 protein Ava_2825 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_2825 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.412e-36 Identity = 64/101 (63.37%), Postives = 86/101 (85.15%), Query Frame = -2 Query: 381 KRVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCY 683 K+VAM+CTGGIRCEKASSF+LS+GF EVYHL+GGILKYLE++P +ESLW+GECFVFD+R++V HGL GT +LC+ C P+++ D SP +E G++C +C+ Sbjct: 174 KKVAMFCTGGIRCEKASSFMLSQGFAEVYHLKGGILKYLEQIPPEESLWQGECFVFDERIAVVHGLEPGTHELCFCCGHPLAEEDKASPQYEEGISCSHCF 274
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y411_PSYCK (UPF0176 protein Pcryo_0411 OS=Psychrobacter cryohalolentis (strain K5) GN=Pcryo_0411 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.844e-36 Identity = 70/132 (53.03%), Postives = 98/132 (74.24%), Query Frame = -2 Query: 384 FQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYC 779 FQN + E+ E + + KE+ P K K+VAM+CTGGIRCEK+++F+ +GFEEVYHLEGGILKYLEEVP +S+WEG+CFVFD RVSV H L +G+++ C+ C+ P++ A+M+SP + G +CP+C Sbjct: 164 FQNAVNPNTETFREFPEYVA-KEL-DPSKH--KKVAMFCTGGIRCEKSTAFMREQGFEEVYHLEGGILKYLEEVPASDSMWEGDCFVFDNRVSVNHNLEKGSYEQCFACRMPITQAEMQSPAYIKGESCPHC 291
BLAST of CX672286 vs. ExPASy Swiss-Prot
Match: Y895_GLUOX (UPF0176 protein GOX0895 OS=Gluconobacter oxydans GN=GOX0895 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.409e-36 Identity = 66/105 (62.86%), Postives = 90/105 (85.71%), Query Frame = -2 Query: 378 RMPKRVAMYCTGGIRCEKASSFLLSEGFEEVYHLEGGILKYLEEVPKKESLWEGECFVFDKRVSVEHGLVQGTFKLCYGCKQPVSDADMESPLWEYGVTCPYCYS 692 R+PK +AM+CTGGIRCEK++SF +EG +EVYHL+GGILKYLE VP++ESLWEGECFVFD+RVSV+HGL GT +C+ C++P+++ D SPL+ GV+CP+C++ Sbjct: 177 RLPK-IAMFCTGGIRCEKSTSFARAEGVDEVYHLKGGILKYLETVPEEESLWEGECFVFDQRVSVKHGLEIGTHDVCHACRRPLNEKDKASPLFVQGVSCPHCHN 280 The following BLAST results are available for this feature:
BLAST of CX672286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 318
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672286 ID=CX672286; Name=CX672286; organism=Citrus sinensis; type=EST; length=786bpback to top |