CX672278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672278 vs. ExPASy Swiss-Prot
Match: RAGP2_ARATH (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana GN=RANGAP2 PE=1 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 1.543e-73 Identity = 143/228 (62.72%), Postives = 171/228 (75.00%), Query Frame = 1 Query: 130 NSERRPFSIKLWPPSQNTRQMLVERMRNNLTTKSIFTQRYGVLTQEEAEENAKKIEDVAFSSANEHYEKEPDGDGSSAVQLYARECSKLLLEALKRGPRTKEFGEVPSFEKTEDVTEELTSEKVSTADVTLFDISKGQRAFXXXXXXXXXLRPLKEPGNSYTKICFSNRSFGLEAARVAEPILVSINSQLKEVDLSDFVAGRPEAEALEVMAIFSAALEGSVLKSLNL 813 +S FSIKLWPPS TR+ L+ER+ NN ++K+IFT++YG LT+++A ENAK+IED+AFS+AN+ +E+EPDGDG SAVQLYA+ECSKL+LE LK+GP K EL SE + T FDISKG+RAF L+PLKEPGN+YTKICFSNRSFGL AARVAEPIL S+ QLKEVDLSDFVAGRPE EALEVM IFS AL+GS+L SLNL Sbjct: 6 DSRPHAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKV------------AARELISEDSVSPRETFFDISKGKRAFIEAEEAEELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQLKEVDLSDFVAGRPELEALEVMNIFSDALQGSILSSLNL 221
BLAST of CX672278 vs. ExPASy Swiss-Prot
Match: RAGP1_ARATH (RAN GTPase-activating protein 1 OS=Arabidopsis thaliana GN=RANGAP1 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.810e-64 Identity = 129/234 (55.13%), Postives = 167/234 (71.37%), Query Frame = 1 Query: 112 MDATSPNSERRPFSIKLWPPSQNTRQMLVERMRNNLTTKSIFTQRYGVLTQEEAEENAKKIEDVAFSSANEHYEKEPDGDGSSAVQLYARECSKLLLEALKRGPRTKEFGEVPSFEKTEDVTEELTSEKVSTADVTLFDISKGQRAFXXXXXXXXXLRPLKEPGNSYTKICFSNRSFGLEAARVAEPILVSINSQLKEVDLSDFVAGRPEAEALEVMAIFSAALEGSVLKSLNL 813 MD ++ ++ R S+K+WPPS++TR MLVERM N+TT SIF+++YG+L+ EEAE++AK+IED+AF++AN+H++ EPDGDG+SAV +YA+E SKL+L+ +KRGP +E + +VS FDIS G RAF LRPL +P NSYTKI FSNRSFG EAA+ A +L SI QL EVDLSDFVAGRPEAEALEVM +FS+ALEGS L+ LNL Sbjct: 1 MDHSAKTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGP------------------QEESEVEVSKDGDVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSKLRYLNL 216
BLAST of CX672278 vs. ExPASy Swiss-Prot
Match: MAF1_SOLLC (MFP1 attachment factor 1 OS=Solanum lycopersicum GN=MAF1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.820e-13 Identity = 41/126 (32.54%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 115 DATSPNSERRPF--SIKLWPPSQNTRQMLVERMRNNLTTKSIFTQRYGVLTQEEAEENAKKIEDVAFSSANEHYEKEPDGDGSSAVQLYARECSKLLLEALK--RGPRTKEFGEVPSFEKTEDVTE 480 + + ++ +P S +WPP+Q TR ++ R+ +L+T SI ++RYG L Q+EA E A+ IE+ AF++A DG +Q+Y++E SK +++ +K P GE E D +E Sbjct: 11 ETVTQETQNKPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAAAGS--TASDADDGIEILQVYSKEISKRMIDTVKSRSAPAAASEGESKPSELPADASE 134
BLAST of CX672278 vs. ExPASy Swiss-Prot
Match: WPP2_ARATH (WPP domain-containing protein 2 OS=Arabidopsis thaliana GN=WPP2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.984e-12 Identity = 37/96 (38.54%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 133 SERRP--FSIKLWPPSQNTRQMLVERMRNNLTTKSIFTQRYGVLTQEEAEENAKKIEDVAFSSANEHYEKEPDGDGSSAVQLYARECSKLLLEALK 414 SE++P S+++WPP+Q TR ++ R+ L+T+SI ++RYG L ++A AK IE+ A+ A+ D DG ++LY++E SK +LE++K Sbjct: 49 SEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSS--DDDGIKILELYSKEISKRMLESVK 142
BLAST of CX672278 vs. ExPASy Swiss-Prot
Match: WPP1_ARATH (WPP domain-containing protein 1 OS=Arabidopsis thaliana GN=WPP1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12 Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 121 TSPNSERRPFSIKLWPPSQNTRQMLVERMRNNLTTKSIFTQRYGVLTQEEAEENAKKIEDVAFSSANEHYEKEPDGDGSSAVQLYARECSKLLLEALK 414 T N S+++WPP+Q TR ++ R+ L+T+SI ++R+G L EEA AK IED A++ A+ D DG ++ Y++E SK +LE++K Sbjct: 31 TEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASA--TVFGDDDGIEILKAYSKEISKRMLESVK 126 The following BLAST results are available for this feature:
BLAST of CX672278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672278 ID=CX672278; Name=CX672278; organism=Citrus sinensis; type=EST; length=814bpback to top |