CX672265

Overview
NameCX672265
Unique NameCX672265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8020 contig Csv1_Contig8020:1..853. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.385e-74
Identity = 129/187 (68.98%), Postives = 154/187 (82.35%), Query Frame = -3
Query:  303 GYQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESG----QGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 851
            GYQDTLYV+SQRQFYR CDIYGT DFIFG+AAVVLQ+CNI+ RKP   + NT+TAQGR DPN++TGII+HN RVTA S     Q S K++LGRPWKQYSRTV++K  +D +I+PAGW+ WSG FAL+TLYY EYMN G G+ST+ RVKW GYHV+ SP +  +FTVGNF+AGNSW+PAT VPF SGL
Sbjct:  325 GYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPN-RTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.480e-71
Identity = 123/183 (67.21%), Postives = 144/183 (78.69%), Query Frame = -3
Query:  303 GYQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 851
            GYQDTLY++S RQF RNC+IYGT DFIFGDA  +LQ+CNIY RKP  GQKNT+TAQ RK+P+E TG ++ +S V   S     ++YLGRPW+ +SRTVFMKCN+  ++ PAGWLPWSGSFALSTLYYGEY N G GAS SGRVKW GYHVI++  EA KFTV NFL GN WI ATGVP + GL
Sbjct:  377 GYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATAS-----ETYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 4.194e-69
Identity = 125/186 (67.20%), Postives = 148/186 (79.57%), Query Frame = -3
Query:  303 YQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQ----GSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 848
            YQDTLYV+S RQFYR+CD+YGT DFIFG+AA VLQ+CNI+ R+P   + NT+TAQGR DPN+NTGII+HNSRVTA S      GS K+YLGRPW+QYSRTVFMK ++D +IDP GWL W G+FAL TL+Y E+ N G GASTSGRV W G+ V+ S  EA KFTVG FLAG SWIP++ VPF SGL
Sbjct:  328 YQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRS-KTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGFRVLGSASEASKFTVGTFLAGGSWIPSS-VPFTSGL 511          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.340e-66
Identity = 117/187 (62.57%), Postives = 142/187 (75.94%), Query Frame = -3
Query:  303 GYQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTA----ESGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 851
            GYQD LYV+S RQF+R C+IYGT DFIFG+AAV+LQSCNIY RKP   QK T+TAQ RKDPN+NTGI +H  ++ A    E+ +GS+ +YLGRPWK YSR V+M  ++   IDP GWL W+G FAL +LYYGEYMN G G+    RVKW GYHVI S VEA KFTV  F++G+SW+P+TGV F SGL
Sbjct:  399 GYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.396e-64
Identity = 117/186 (62.90%), Postives = 141/186 (75.81%), Query Frame = -3
Query:  303 YQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESG----QGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 848
            YQDTLYV+S RQF+ NC I GT DFIFG+AA VLQ+C+I+ RKP  GQKN VTAQGR DPN+NTGI++  SR+ A S     QGSF +YLGRPWK+YSRTV M+ +I  VI PAGW  W G+FAL+TL+YGE+ N G GA TSGRVKW G+ VI S  EA  FT G+F+AG+SW+ +TG PF  GL
Sbjct:  399 YQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.396e-64
Identity = 114/187 (60.96%), Postives = 142/187 (75.94%), Query Frame = -3
Query:  303 GYQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTA----ESGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 851
            GYQDTL+ +S RQFYR+  IYGT DFIFGDAA V Q+C+I++R+P   Q N +TAQGR DP+ N+GI + +SR+ A    E+ +G FKSYLGRPWK+YSRTVF+K +ID +IDP GW  WSGS+ALSTLYYGE+MN G GA T  RV W G+HV+R   EA  FTV  F+ G+SWIP TGVPF +G+
Sbjct:  333 GYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.381e-64
Identity = 117/186 (62.90%), Postives = 139/186 (74.73%), Query Frame = -3
Query:  303 YQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESG----QGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 848
            YQD+LYV+S RQF+ NC I GT DFIFG+AAVVLQ C+I+ R+P  GQKN VTAQGR DPN+NTGI++  SR+ A S     Q SF +YLGRPWK+YSRTV M+ +I  VI+PAGW PW G+FAL TLYYGEY N G GA+TSGRV W G+ VI S  EA  FT G+F+AG SW+ AT  PF  GL
Sbjct:  134 YQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.062e-64
Identity = 116/186 (62.37%), Postives = 141/186 (75.81%), Query Frame = -3
Query:  303 YQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESG----QGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 848
            YQDTLYV+S RQF+ NC I GT DFIFG+AA VLQ+C+I+ RKP  GQKN VTAQGR DPN+NTGI++  SR+ A S     QGSF +YLGRPWK+YSRTV M+ +I  +I PAGW  W G+FAL+TL+YGE+ N G GA TSGRVKW G+ VI S  EA  FT G+F+AG+SW+ +TG PF  GL
Sbjct:  399 YQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.491e-63
Identity = 115/187 (61.50%), Postives = 138/187 (73.80%), Query Frame = -3
Query:  303 GYQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESG----QGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 851
            GYQDTLYV+S RQF+R CDIYGT DFIFG+AAVVLQ+C+IY RKP   QKNT+TAQ RKDPN+NTGI +H SRV A S      GS ++YLGRPWK +SRTV+M   I G +   GWL W+ +FAL TLYYGEY+N G G+    RV W GY VI S  EA +FTV  F+ G+SW+P+TGV F +GL
Sbjct:  410 GYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596          
BLAST of CX672265 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.469e-62
Identity = 116/183 (63.39%), Postives = 136/183 (74.32%), Query Frame = -3
Query:  303 GYQDTLYVYSQRQFYRNCDIYGTQDFIFGDAAVVLQSCNIYIRKPTGGQKNTVTAQGRKDPNENTGIIVHNSRVTAESGQGSFKSYLGRPWKQYSRTVFMKCNIDGVIDPAGWLPWSGSFALSTLYYGEYMNIGTGASTSGRVKWSGYHVIRSPVEAGKFTVGNFLAGNSWIPATGVPFDSGL 851
            GYQD+LY  S+RQFYR  DI GT DFIFG++AVV QSCN+  RK +  Q N VTAQGR DPN+NTGI +HN R+T     GS K+YLGRPWKQYSRTV M+  IDG I P+GW PWS +FAL TLYYGE+ N G G+S SGRV W+GYH   +  EA  FTV  F+ GNSW+P+TGV FDSGL
Sbjct:  352 GYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRIT-----GSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
The following BLAST results are available for this feature:
BLAST of CX672265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME2_CITSI7.385e-7468.98Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME6_ARATH4.480e-7167.21Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME17_ARATH4.194e-6967.20Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME61_ARATH4.340e-6662.57Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_CITSI1.396e-6462.90Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME36_ARATH1.396e-6460.96Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_DAUCA2.381e-6462.90Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME1_CITSI4.062e-6462.37Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME34_ARATH4.491e-6361.50Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME35_ARATH8.469e-6263.39Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_16A01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-16A01-B2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672265 ID=CX672265; Name=CX672265; organism=Citrus sinensis; type=EST; length=853bp
TTTTTTTTTTTTTTTTTACAGCATAAAAGCTATTATATCACTTTTATTTT
CACAATTACATATATTACAAATTGATAAAAGATTAGGCTATCATACAAAT
TTCTTTTATTCTTTAACAACAAGTGCAGGTAAAGCATCGTCTCCTAGTAT
ATGTATATGATATGTGTAAATGAAAACAGCCAACAAAAACTATACGACGA
TTTGAACACGTTAAATCCCTTTTCCCATTTACAAATGACGACAAACACTA
TTGTTTCCCTAACATTATTAAAAGCAAACTGCGTGCGCCTGATGATAATT
CACAAACCAGAATCAAACGGCACTCCGGTCGCCGGAATCCAAGAGTTTCC
GGCCAAAAAGTTTCCAACCGTAAACTTCCCGGCCTCCACGGGGCTCCGTA
TAACATGATACCCGGACCATTTCACCCTCCCACTAGTGCTTGCACCGGTT
CCGATGTTCATATACTCACCATAATAAAGAGTGCTCAAAGCAAAACTCCC
ACTCCACGGCAACCAACCAGCTGGATCAATCACTCCATCGATATTACACT
TCATAAACACAGTTCTTGAATATTGCTTCCATGGCCTGCCTAAATAACTC
TTGAACGATCCCTGACCCGACTCCGCCGTAACCCTAGAATTATGAACAAT
GATGCCTGTGTTTTCGTTAGGGTCTTTTCTTCCTTGTGCTGTGACAGTGT
TCTTTTGGCCGCCTGTTGGTTTTCTTATGTAGATGTTGCAGCTTTGGAGA
ACAACTGCTGCGTCCCCAAATATGAAGTCTTGGGTTCCATATATGTCACA
GTTGCGGTAGAATTGGCGTTGAGAGTAGACATATAAGGTATCTTGATATC
CTT
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