EY664710

Overview
NameEY664710
Unique NameEY664710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.404e-24
Identity = 65/159 (40.88%), Postives = 89/159 (55.97%), Query Frame = 2
Query:  173 NFKEQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDG-GPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            NF ++AI+ V+QA ++ NA NYA+A  LY+ +LE+F T LKYEK+ + K  I  K  EYL+RAE+++  LD      P   G     +    N             DPE  K    L+S+I+   PNVKW+DVA L  A + L+EAVI P+K  Q  TG
Sbjct:    5 NFLQKAIQIVQQATEQDNAKNYAEAHRLYIQSLEWFTTALKYEKSERSKATIKAKTLEYLQRAEQLKEYLDKSKNKKPVAVGGNKSNSAGSANGAGKSAKEDDEDMDPEDKKRNDSLSSSIVTTKPNVKWDDVAGLYQAKEYLKEAVIFPIKFPQMFTG 163          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.855e-23
Identity = 76/200 (38.00%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  173 NFKEQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTGGDNVESILLV--DHLELKSIPGQAGAMKP-TLLFQVSSLDLV 763
            +F  + IE V++A+    A  Y +A   Y N L+Y    LKYEKNPK K+ I  KFTEYL RAE+++  L+      A    +A +     N             + ++ KL   L+SAI+ E PNVKW DVA LE A +AL+EAVI+PVK      G     S +L+       KS   +A A +  +  F VSS DLV
Sbjct:    5 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQLKKHLESEEANAAKKSPSAGSGSNGGNKKISQEEGEDNGGE-DNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLV 203          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.729e-23
Identity = 75/205 (36.59%), Postives = 103/205 (50.24%), Query Frame = 2
Query:  185 QAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDD-----GGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQ-FSTGGDNVESILLV------DHLELKSIPGQAGAMKPTLLFQVSSLDLV 763
            +AI  VK A+   NA  Y  A   Y +AL+YF   LKYEKN K KE I  K  EYL RAE+++  L +            NG+   +  P  N             D +  KL + L SAI+ E PNV+W+D+A LE+A +AL+E V++P+K+ Q FS G      ILL            K++  +AG    +  F +SS DLV
Sbjct:    9 KAISLVKTAIDNDNAEQYPDAYKYYQSALDYFMMALKYEKNEKSKEIIRSKVIEYLDRAEKLKVYLQEKNNQISSKSRVSNGNVEGSNSPTANEAL----------DSDAKKLRSALTSAILVEKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSHGRKPWSGILLYGPPGTGKSYLAKAVATEAG----STFFSISSSDLV 199          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.417e-22
Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  182 EQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            ++AI+   +A QE  AGNY +AL LY +A++YF   +KYE +  K K++I  K TEYL RAE+++  L   +     P   G  A A     + +          +DPE  KL   L  AI+ E PNVKW+DVA LE A +AL+EAVI+P+K     TG
Sbjct:    9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKREKKPQKPVKEGQPAPADEKGNDSDGEGES-----DDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTG 162          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.850e-22
Identity = 64/159 (40.25%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  182 EQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            ++AI+   +A QE  AGNY +AL LY +A++YF   +KYE +  K K++I  K TEYL RAE+++  L   +     P   G  + A     + +          +DPE  KL   L  AI+ E PNVKW+DVA LE A +AL+EAVI+P+K     TG
Sbjct:    9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGES-----DDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTG 162          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.384e-22
Identity = 63/159 (39.62%), Postives = 90/159 (56.60%), Query Frame = 2
Query:  182 EQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            ++AI+   +A QE  AGNY +AL LY +A++YF   +KYE +  K K++I  + TEYL RAE+++  L   +     P   G  + A     + +          +DPE  KL   L  AI+ E PNVKW+DVA LE A +AL+EAVI+P+K     TG
Sbjct:    9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAQCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGES-----DDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTG 162          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21
Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  182 EQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVLD--DGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            ++AI+   +A QE  AGNY +AL LY +A++YF   +KYE +  K K++I  K TEYL RAE+++  L   +  P      + +     K N +          +DPE  KL   L  AI+ E PNVKW+DVA LE A +AL+EAVI+P+K     TG
Sbjct:    9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKKEKKPQKPVKEEQSGPVDEKGNDSDGEAES----DDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTG 162          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.582e-20
Identity = 60/165 (36.36%), Postives = 90/165 (54.55%), Query Frame = 2
Query:  164 MYSNFKEQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYEKNP-KIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            M ++  ++AI+ V +A +E  A NY +AL LY +A+EYF   +KYE +  K KE+I  K  +YL RAE+++  L   +  G  P     +        +            ++PE  KL   L  A++ E PN++WNDVA LE A +AL+EAVI+P+K     TG
Sbjct:    1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEG----------DNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTG 155          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  164 MYSNFKEQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYEKNP-KIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            M ++  ++AI+ V +A +E  A NY +AL LY +A+EYF   +KYE +  K KE+I  K  +YL RAE+++  L +       +G   V    +              ++PE  KL   L  A++ E PN++WNDVA LE A +AL+EAVI+P+K     TG
Sbjct:    1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRN----KEKHGKKPVK---ENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTG 155          
BLAST of EY664710 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  164 MYSNFKEQAIEYVKQAVQEHNAGNYAKALPLYMNALEYFKTHLKYEKNP-KIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTNPNXXXXXXXXXXEDPEHAKLTAGLNSAIIREMPNVKWNDVAVLESANQALQEAVIMPVKITQFSTG 646
            M ++  ++AI+ V +A +E  A NY +AL LY +A+EYF   +KYE +  K KE+I  K  +YL RAE+++  L +       +G   V    +              ++PE  KL   L  A++ E PN++WNDVA LE A +AL+EAVI+P+K     TG
Sbjct:    1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRN----KEKHGKKPVK---ENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTG 155          
The following BLAST results are available for this feature:
BLAST of EY664710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPS4_DICDI4.404e-2440.88Vacuolar protein sorting-associated protein 4 OS=D... [more]
VPS4_YEAST2.855e-2338.00Vacuolar protein sorting-associated protein 4 OS=S... [more]
VPS4_SCHPO3.729e-2336.59Suppressor protein of bem1/bed5 double mutants OS=... [more]
VPS4B_BOVIN1.417e-2240.88Vacuolar protein sorting-associated protein 4B OS=... [more]
VPS4B_HUMAN1.850e-2240.25Vacuolar protein sorting-associated protein 4B OS=... [more]
VPS4B_PONAB5.384e-2239.62Vacuolar protein sorting-associated protein 4B OS=... [more]
VPS4B_MOUSE1.199e-2140.51Vacuolar protein sorting-associated protein 4B OS=... [more]
VPS4A_HUMAN6.582e-2036.36Vacuolar protein sorting-associated protein 4A OS=... [more]
VPS4A_RAT8.596e-2037.04Vacuolar protein sorting-associated protein 4A OS=... [more]
VPS4A_MOUSE8.596e-2037.04Vacuolar protein sorting-associated protein 4A OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664710 ID=EY664710; Name=EY664710; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGGCTGCTTCACTTTGCCATTTAATCAAACACAAAACAAA
CAGGAAACTCAAATTCTAAATCGAAATCTTTCAATTCACCCAAAAATCAA
AATTAGTAATTCTCACATGCGATCCGATCATAAACCCTAACCAATAGATT
TATAATTTGAAGGATGTACAGCAACTTCAAGGAACAGGCAATCGAGTACG
TGAAACAAGCCGTGCAAGAACACAATGCTGGAAATTACGCAAAAGCCTTG
CCTCTTTACATGAACGCCTTGGAGTATTTCAAAACCCACTTGAAGTACGA
GAAGAATCCCAAGATTAAGGAGGCGATCACTCAGAAATTCACCGAGTATT
TGCGCCGGGCCGAGGAGATCCGTGCCGTTCTGGATGACGGAGGGCCCGGC
CCCGCTCACAACGGGGACGCTGCGGTGGCGACCCGGCCTAAGACGAATCC
GAATGATGGTGGTGATGGTGGCGGCGGTGATGGGGAGGATCCGGAGCATG
CGAAGCTGACGGCTGGATTGAATTCTGCGATTATTAGGGAGATGCCTAAT
GTTAAGTGGAATGACGTGGCGGTTTTAGAAAGCGCTAATCAAGCTTTGCA
AGAAGCTGTGATTATGCCGGTTAAGATTACCCAGTTTTCAACCGGAGGAG
ACAACGTGGAGAGCATTCTATTGGTGGACCACCTGGAACTGAAGAGTATA
CCTGGACAAGCTGGTGCAATGAAGCCGACTCTACTTTTTCAGGTTTCTTC
ATTAGACCTGGTTTAAAGTGAAGGGGGAAAGTGAAAGCCTGACTAAGCCT
TTTGCAGATGGTCGGGAAAGGGCTCCTTCATTTTTTTATTGAGAATAAAT
CCTTTTGGGGCACCGGGGAAAGGAATGAAAGGGAACTT
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