CX043648

Overview
NameCX043648
Unique NameCX043648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10875 contig Csv1_Contig10875:83..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE2_CYATE (UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.623e-77
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            IGEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+T DGTGVRDYIHV+DLADGHIAAL KL+DPKIGCEVYNLGTGKGTSVLEMV AFE+ASGKKIPLV +GRRPGDAE+VYAST KAERELNWKAKYGIDEMCRDQWNWASKNPYGY
Sbjct:  194 IGEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYTTSDGTGVRDYIHVVDLADGHIAALRKLNDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGKKIPLVMAGRRPGDAEVVYASTNKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 342          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE2_ARATH (UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3)

HSP 1 Score: 276.174 bits (705), Expect = 1.425e-73
Identity = 131/150 (87.33%), Postives = 138/150 (92.00%), Query Frame = -3
Query:  326 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 775
            IGEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+TKDGTGVRDYIHVIDLADGHIAAL KL+D KIGCEVYNLGTG GTSVLEMV AFEKASGKKIPLV +GRRPGDAE+VYAST +AE ELNWKAKYGI+EMCRD WNWAS NPYGY+
Sbjct:  194 IGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYD 343          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE3_ARATH (UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 7.070e-73
Identity = 130/149 (87.25%), Postives = 136/149 (91.28%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            IGEDP G+PNNLMP+V QVAVGRRP LTVFGTDY TKDGTGVRDYIHV+DLADGHIAAL KLDD KI CEVYNLGTG GTSVLEMVAAFEKASGKKIPLV +GRRPGDAE+VYAST KAERELNWKAK GI+EMCRD WNWAS NPYGY
Sbjct:  193 IGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYGY 341          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE1_ARATH (UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.337e-63
Identity = 115/151 (76.16%), Postives = 129/151 (85.43%), Query Frame = -3
Query:  326 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 775
            IGEDP+GIPNNLMP++ QVAVGR PEL V+G DY T+DG+ VRDYIHV+DLADGHIAAL KL  DPKIGC  YNLGTG+GTSVLEMVAAFEKASGKKIP+    RR GDA  VYAST KAE+EL WKAKYG+DEMCRDQW WA+ NP+GY+
Sbjct:  198 IGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQ 348          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE1_CYATE (UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.131e-62
Identity = 112/152 (73.68%), Postives = 127/152 (83.55%), Query Frame = -3
Query:  326 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 778
            +IGEDPRG+PNNLMP++ QVAV R PEL ++G DY TKDGT +RDYIHV+DLADGHIAAL KL     IGC  YNLGTG+GTSVLEMVAAFEKASGKKIP+    RRPGDA  VYAST KAE+EL WKAKYG++EMCRDQW WAS NP+GY+
Sbjct:  200 QIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAIRDYIHVMDLADGHIAALRKLFTTDNIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKMCPRRPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKWASNNPWGYQ 351          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE1_PEA (UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.615e-62
Identity = 112/151 (74.17%), Postives = 126/151 (83.44%), Query Frame = -3
Query:  329 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 778
            K+GEDPRGIPNNLMP++ QVAVGR PEL V+G DY T+DG+ +RDYIHV+DLADGHIAAL KL     IGC  YNLGTG+G+SVLEMVAAFEKASGKKI L    RRPGDA  VYAST KAE+EL WKAKYG++EMCRDQWNWA  NP+GY
Sbjct:  196 KLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGY 346          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_HUMAN (UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.775e-50
Identity = 94/149 (63.09%), Postives = 109/149 (73.15%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGVRDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGKKIP     RR GD    YA+   A+ EL W A  G+D MC D W W  +NP G+
Sbjct:  197 IGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_PONAB (UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.440e-50
Identity = 94/149 (63.09%), Postives = 108/149 (72.48%), Query Frame = -3
Query:  329 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 775
            IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGVRDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGKKIP     RR GD    YA+   A  EL W A  G+D MC D W W  +NP G+
Sbjct:  197 IGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGF 344          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_BACSU (UDP-glucose 4-epimerase OS=Bacillus subtilis GN=galE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.440e-50
Identity = 93/151 (61.59%), Postives = 113/151 (74.83%), Query Frame = -3
Query:  326 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYGYE 778
            +IGEDP GIPNNLMP+V QVAVG+  +L+VFG DY TKDGTGVRDYIHV+DLA+GH+ AL K+ +   G + YNLGTG G SVLEMV AFEK SGK++P   + RRPGD    +A   KA+REL W+AK G++EMC D W W S N  GY+
Sbjct:  187 RIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYIHVVDLAEGHVKALEKVLN-STGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATCFADPAKAKRELGWEAKRGLEEMCADSWRWQSSNVNGYK 336          
BLAST of CX043648 vs. ExPASy Swiss-Prot
Match: GALE_RAT (UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.098e-49
Identity = 94/149 (63.09%), Postives = 109/149 (73.15%), Query Frame = -3
Query:  332 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVKSGRRPGDAEIVYASTGKAERELNWKAKYGIDEMCRDQWNWASKNPYG 778
            +IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY+T+DGTGVRDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGKKIP     RR GD    YA+   A  EL W A  G+D MC D W W  +NP G
Sbjct:  195 RIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSG 342          
The following BLAST results are available for this feature:
BLAST of CX043648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
GALE2_CYATE3.623e-7790.60UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetrag... [more]
GALE2_ARATH1.425e-7387.33UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana ... [more]
GALE3_ARATH7.070e-7387.25UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana ... [more]
GALE1_ARATH1.337e-6376.16UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana ... [more]
GALE1_CYATE1.131e-6273.68UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetrag... [more]
GALE1_PEA5.615e-6274.17UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE P... [more]
GALE_HUMAN3.775e-5063.09UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE... [more]
GALE_PONAB6.440e-5063.09UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE... [more]
GALE_BACSU6.440e-5061.59UDP-glucose 4-epimerase OS=Bacillus subtilis GN=ga... [more]
GALE_RAT1.098e-4963.09UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Ga... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12E09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12E09-I18-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043648 ID=CX043648; Name=CX043648; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTGCAAGAAAGGAAGAAAATCTTTAAATTAATAAGCTGA
AAATTTGAAGACCAATAATCAACACACCAATGACACTGTTCCAAATAAGG
GAATGCCTAGATAAATCTTCACAGTAGAAGATTGTATAGGGGACCTTCTA
TTGTTGTACAATACCACAAGGAGATTGTATAGGGGACCTTCTATTGTTGT
ACAATACCACAAGGTTTTTCAGCTTAAAAATCTGATAATTAAGTGTACAG
AATAGACACTGTATATAGCGAGGAACTACTAAGAAGGATGACAAATGACA
GTTATTAGCTAGTCGAGTTGGAAGATTCATAGCCATAAGGGTTCTTGCTG
GCCCAATTCCATTGATCCCTACACATCTCGTCAATGCCATATTTTGCCTT
CCAATTCAATTCACGTTCTGCCTTTCCTGTTGATGCATAAACAATTTCTG
CGTCACCGGGTCGCCTCCCAGACTTTACAAGAGGAATTTTCTTTCCAGAG
GCTTTTTCAAATGCTGCAACCATCTCCAAAACTGATGTCCCTTTTCCCGT
TCCCAAGTTGTACACCTCACAACCTATCTTAGGATCATCAAGCTTATGCA
ATGCAGCAATGTGCCCATCAGCTAAGTCAATAACATGAATGTAATCACGG
ACCCCAGTACCATCCTTTGTTGAGTAATCAGTTCCAAATACTGTCAGCTC
TGGACGCCTGCCAACAGCAACTTGAGTGACGAAGGGCATGAGATTGTTTG
GAATTCCACGGGGATCCTCACCAATTTTGC
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