EY686949

Overview
NameEY686949
Unique NameEY686949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.812e-81
Identity = 146/172 (84.88%), Postives = 159/172 (92.44%), Query Frame = 1
Query:    4 RGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            RG S+ ++S   D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTH GCIPLPNAG F
Sbjct:   44 RGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 215          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.038e-81
Identity = 145/172 (84.30%), Postives = 159/172 (92.44%), Query Frame = 1
Query:    4 RGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            RG S+ ++S   D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTH GCIPLPNAG F
Sbjct:   58 RGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDF 229          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.887e-81
Identity = 145/173 (83.82%), Postives = 159/173 (91.91%), Query Frame = 1
Query:    1 IRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            I G S+ ++S   D+GL+ DLP TVAA+KNPTSKIVYDEHNHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI LANSVD+ SLRDPQ+D+ RVK+PEWLVV+GVCTH GCIPLPNAG F
Sbjct:   21 ISGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDF 193          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.617e-80
Identity = 145/172 (84.30%), Postives = 158/172 (91.86%), Query Frame = 1
Query:    4 RGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            RG S+ ++S     GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTH GCIPLPNAG F
Sbjct:   54 RGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 225          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.830e-80
Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 1
Query:    4 RGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            RG S+ ++S     GL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYASL+RLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT+EDI LANSVD+ SLRDPQ+D+ RVKNPEWLVV+GVCTH GCIPLPNAG F
Sbjct:   54 RGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 225          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.216e-79
Identity = 143/173 (82.66%), Postives = 160/173 (92.49%), Query Frame = 1
Query:    1 IRGLSAEALSLGRDLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            IRG S+ ++S    LGL+SDLPATVAA+KNP+SKIVYD+ NHERYPPGD SKRAFAYF+LTGGRFVYAS +RLLILKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT++DI+LANSVD+ +LRDPQ+D+ RVKNPEWLVVVGVCTH GCIPLPNAG F
Sbjct:   50 IRGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDF 222          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.486e-75
Identity = 141/174 (81.03%), Postives = 157/174 (90.23%), Query Frame = 1
Query:    4 RGLSAEALSLGR--DLGLISDLPATVAAVKNPTSKIVYDEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            RG S+    + R  D GL +DLPATVAAVKNP  K+VYDE+NHERYPPGD SKRAFAYF+L+GGRF+YASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE+DI+LANSVDVASLR P++D+ RVKNPEWLVV+GVCTH GCIPLPNAG F
Sbjct:   58 RGFSSTETVVPRNQDAGL-ADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDF 230          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30
Identity = 68/154 (44.16%), Postives = 104/154 (67.53%), Query Frame = 1
Query:   61 LPATVAAVKNPTSKIVYDEHNHERYPPGDASK-RAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            L A+ +  + P    V  E+N       DA K R++AYF++     + ++  +  +  F+ SM+A+ DVLA+A +EV+L++I  G  V VKW+GKPVFIR RT  +IQ ANSVD+++L+DPQ D+ RVK+P+WL+++G+CTH GC+P+  AG F
Sbjct:   27 LLASKSTYRTPNFDDVLKENN-------DADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDF 173          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30
Identity = 65/128 (50.78%), Postives = 92/128 (71.88%), Query Frame = 1
Query:  136 PPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            PP  ++   F+YF++     + A+  +  I +F+ +MSAS DVLA+A +EVDL++I  G  V +KWRGKPVFIR RT  +I+ AN V+VA+LRDP+ D+ RVK PEWLV++GVCTH GC+P+  AG +
Sbjct:   63 PP--STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTHLGCVPIGEAGDY 188          
BLAST of EY686949 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.533e-30
Identity = 67/136 (49.26%), Postives = 91/136 (66.91%), Query Frame = 1
Query:  112 DEHNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVKNPEWLVVVGVCTHFGCIPLPNAGAF 519
            D   ++    GD S R  +Y ++     + A+  +  +  F+ S SAS DVLA++  EVDLS I  G  + VKW+GKPVFIR RT E+IQ ANSVD+++LRDPQ DS RV+ PEWLV++GVCTH GC+P+  AG +
Sbjct:   52 DFSEYQTKSTGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIGVCTHLGCVPIGEAGDY 186          
The following BLAST results are available for this feature:
BLAST of EY686949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
UCRI1_TOBAC1.812e-8184.88Cytochrome b-c1 complex subunit Rieske-1, mitochon... [more]
UCRI2_TOBAC4.038e-8184.30Cytochrome b-c1 complex subunit Rieske-2, mitochon... [more]
UCRI4_TOBAC6.887e-8183.82Cytochrome b-c1 complex subunit Rieske-4, mitochon... [more]
UCRI3_TOBAC2.617e-8084.30Cytochrome b-c1 complex subunit Rieske-3, mitochon... [more]
UCRI5_TOBAC5.830e-8083.72Cytochrome b-c1 complex subunit Rieske-5, mitochon... [more]
UCRI_SOLTU2.216e-7982.66Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_MAIZE1.486e-7581.03Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_YEAST1.115e-3044.16Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_NEUCR1.902e-3050.78Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_SCHPO5.533e-3049.26Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-031-B09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY686949 ID=EY686949; Name=EY686949; organism=Citrus sinensis; type=EST; length=763bp
ATCAGAGGTTTGTCTGCTGAAGCCCTCAGTCTAGGACGTGATTTGGGTCT
GATCTCAGACCTTCCAGCTACTGTGGCAGCTGTGAAGAACCCAACTTCAA
AAATTGTCTATGATGAGCACAATCATGAGCGTTATCCACCTGGTGACGCC
AGCAAGCGTGCATTTGCTTATTTTATCTTGACAGGTGGCAGGTTTGTGTA
TGCCTCCTTAATTCGTCTTTTGATCCTCAAGTTTGTTCTTAGCATGTCTG
CGAGCAAAGATGTCCTTGCCCTTGCCTCCCTTGAGGTTGACCTATCCAGC
ATTGAACCCGGGACTACTGTTACAGTCAAGTGGCGTGGGAAGCCAGTTTT
CATCAGGCGTCGGACTGAAGAGGATATTCAGTTGGCTAACAGTGTTGATG
TAGCGTCACTCCGGGACCCACAGGAAGATTCTGTCAGGGTTAAGAATCCA
GAATGGCTTGTCGTTGTTGGTGTGTGCACACATTTTGGGTGCATTCCTTT
ACCAAATGCTGGTGCCTTTTGGAAGGTGGCTCCGCGCCCGCCCACGGCCT
GACCATGACGCGCCTAGGCCGATCCGCCGTGGAGAGAGGCACCACGACAG
CAAACGCTACCTAATAGCACGCCCCCCGTCATTTTATGTGATGCCCGCGC
CGGCTCGCGCGGCGCACGAAACAGAAAACTAATCTGCGTCTTGAGTAAGG
CCGCTTGAGGCGGCGAATCGACGCGAGCACACGAGGGGCGCCTCGCAAAG
TACACGGCGGACA
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