CX672189

Overview
NameCX672189
Unique NameCX672189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP5_ARATH (Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 1.231e-72
Identity = 152/229 (66.38%), Postives = 175/229 (76.42%), Query Frame = 1
Query:  112 RRRSIGFGSSAILSSLLVNFCSPSSTLPSFRSAIALQQ----KDELQLEEDRVVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINS 786
            RRR + FGSS  L+S L+   S    LP   SAIAL+Q    ++EL+ EE+R V LFQ+TSPSVV I+ +EL K    TSS  +L D E  K+EGTGSGFVWD  GHIVTNYHV+AKLATD  GL RCKVSL DAKG  F +EGK+VG DP  DLAVLK++ EG EL PVVLGTS+DLRVGQSCFAIGNPYG+E+TLT GVVSGLGREIPSPNG++I  AIQTDA INS
Sbjct:   42 RRRIMIFGSSLALTSSLLG--SNQQRLP-MESAIALEQFKEKEEELEEEEERNVNLFQKTSPSVVYIEAIELPK----TSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPSPNGKSISEAIQTDADINS 263          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP8_ARATH (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.204e-35
Identity = 106/248 (42.74%), Postives = 136/248 (54.84%), Query Frame = 1
Query:   94 KSLDITRRRSIGFGSSAILSSLLVNFC-SPSSTLPSFRSAIALQQKDELQLE---------------EDRVVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFGHIVTNYHVVAKLAT--DTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            KS+  T RR        +L+SL +N C +PS  L    SA+AL       +E               E R+VQLF++ + SVV+I D+ L    K T        G     EG GSG VWD  G+IVTNYHV+    +   + G    +V++  + G     EGK+VG D A DLAVLKVD     LKP+ +G S+ L+VGQ C AIGNP+GF+ TLT GV+SGL R+I S  G  I G IQTDAAIN
Sbjct:   60 KSVPSTTRR-------ILLTSLFMNLCFNPSRYL----SALALGDPSVATVEDVSPTVFPAGPLFPTEGRIVQLFEKNTYSVVNIFDVTLRPQLKMT--------GVVEIPEGNGSGVVWDGQGYIVTNYHVIGNALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTGVTIGGGIQTDAAIN 288          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP1_ARATH (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 4.281e-33
Identity = 87/194 (44.85%), Postives = 120/194 (61.86%), Query Frame = 1
Query:  205 SAIALQQKDELQLEEDRVVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPS-PNGRAIRGAIQTDAAIN 783
            SA  +    +LQ +E   V+LFQE +PSVV I +L + ++  + + +++ V       +G+GSGFVWD  GHIVTNYHV+        G    +V+L D        + K+VG+D   D+AVL++D    +L+P+ +G S DL VGQ  FAIGNP+G + TLTTGV+SGL REI S   GR I+  IQTDAAIN
Sbjct:  104 SAFVVSTPKKLQTDELATVRLFQENTPSVVYITNLAVRQD--AFTLDVLEVP------QGSGSGFVWDKQGHIVTNYHVIR-------GASDLRVTLADQTTF----DAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 278          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: YVTA_BACSU (Uncharacterized serine protease yvtA OS=Bacillus subtilis GN=yvtA PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.025e-15
Identity = 61/184 (33.15%), Postives = 93/184 (50.54%), Query Frame = 1
Query:  256 VVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFG---HIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVV-LGTSHDLRVGQSCFAIGNPYG--FEDTLTTGVVSGLGR--EIPSPNGRAIRGAIQTDAAIN 783
            +  + ++  P++V I +++ S+N    +      + E     GTGSG ++       +I+TN HVV        G ++  V+L+    NG     K+VG D   DLAVL  ++ G  +K V   G S  LR G+   AIGNP G  F  T+T G++SGL R  ++ +  G      +QTDAAIN
Sbjct:  128 IADMVEDLEPTIVGISNIQTSQNNTFGTGGGSSSESE----SGTGSGVIFKKDSDKAYIITNNHVV-------EGANKLTVTLY----NGETETAKLVGSDTITDLAVL--EISGKNVKKVASFGDSSQLRTGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDAAIN 294          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP_RICPR (Probable serine protease do-like OS=Rickettsia prowazekii GN=degP PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  388 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYG-FEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINS 786
            GSGF+    G IVTNYHV+A +          K+++  A    F    K++G D   DLA+LK+D E   L  V  G S+D RVG    AIGNP+G    T+T+G++S  GR+I       +   IQTDAAIN+
Sbjct:  123 GSGFIIAPNGLIVTNYHVIANVE---------KINIKLADNTEFL--AKLIGSDSKTDLALLKIDSEE-PLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDVDTDNIVDNFIQTDAAINN 244          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP_RICCN (Probable serine protease do-like OS=Rickettsia conorii GN=degP PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 54/134 (40.30%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  388 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYG-FEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINS 786
            GSGF+ +  G IVTNYHV+A +        +  + L D          K++G D   DLA+LK+D E   L  V  G S+D RVG    AIGNP+G    T+T+G++S  GR+I       +   IQTDAAIN+
Sbjct:  118 GSGFIIEPNGLIVTNYHVIANV-------DKINIKLAD----NTELSAKLIGNDTKTDLALLKIDSEE-PLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDIDTDNIVDNFIQTDAAINN 239          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: Y938_SYNP6 (Uncharacterized serine protease syc0938_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc0938_d PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 57/137 (41.61%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  382 GTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGRE---IPSPNGRAIRGAIQTDAAIN 783
            G GSGFV D  G I+TN HVVA          + +V+L D  G  F   G++ G D   DLA+++VD +G  L    +G S ++ VG    AIGNP G ++T+T G+VS LGR    +  P+ R     IQTDA IN
Sbjct:  123 GQGSGFVVDGNGLIMTNAHVVANA-------DQVRVTLRD--GREF--TGRVRGADSVTDLALVEVDTKGERLPTARIGNSSNVEVGDWAIAIGNPLGLDNTVTLGIVSSLGRRSSAVGIPDKRL--DFIQTDAVIN 246          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: HTRA_BACSU (Probable serine protease do-like htrA OS=Bacillus subtilis GN=htrA PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 62/187 (33.16%), Postives = 91/187 (48.66%), Query Frame = 1
Query:  244 EEDRVVQLFQETSPSVVSIQDLELSKNPKSTSSELMLVDGEYAKVEGTGSGFVWDMFG---HIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYG--FEDTLTTGVVSGLGREI--PSPNGRAIRGAIQTDAAIN 783
            +  ++  + ++ SP++V I +L+   N     S     D       G+GSG ++       +I+TN HVV        G    KVSL+D    G     K+VG D   DLAVL++  + +  K    G S DLR G++  AIG+P G     T+T G+VSG+ R +   +  G      IQTDAAIN
Sbjct:  114 DSSKISDMVEDLSPAIVGITNLQAQSNSSLFGSSSS--DSSEDTESGSGSGVIFKKENGKAYIITNNHVV-------EGASSLKVSLYD----GTEVTAKLVGSDSLTDLAVLQIS-DDHVTKVANFGDSSDLRTGETVIAIGDPLGKDLSRTVTQGIVSGVDRTVSMSTSAGETSINVIQTDAAIN 286          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP_CHLTR (Probable serine protease do-like OS=Chlamydia trachomatis GN=degP PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.915e-14
Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 1
Query:  388 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            G+GF+    G++VTN+HVV     D   +H   V+L D    G     K+VG DP  DLAV+K+  E  +L  +  G S  L++G    AIGNP+G + T+T GV+S  GR     +       IQTDAAIN
Sbjct:  127 GTGFIVSEDGYVVTNHHVVE----DAGKIH---VTLHD----GQKYTAKIVGLDPKTDLAVIKIQAE--KLPFLTFGNSDQLQIGDWAIAIGNPFGLQATVTVGVISAKGRN--QLHIVDFEDFIQTDAAIN 243          
BLAST of CX672189 vs. ExPASy Swiss-Prot
Match: DEGP_ECOLI (Protease do OS=Escherichia coli (strain K12) GN=degP PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.691e-13
Identity = 56/142 (39.44%), Postives = 73/142 (51.41%), Query Frame = 1
Query:  361 GEYAKVEGTGSGFVWDMF-GHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAIN 783
            G+  K    GSG + D   G++VTN HVV             KV L D  G  F  + KMVG DP  D+A++++      L  + +  S  LRVG    AIGNP+G  +T+T+G+VS LGR     N       IQTDAAIN
Sbjct:  105 GQQQKFMALGSGVIIDADKGYVVTNNHVVDNATV-------IKVQLSD--GRKF--DAKMVGKDPRSDIALIQIQ-NPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRS--GLNAENYENFIQTDAAIN 232          
The following BLAST results are available for this feature:
BLAST of CX672189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
DEGP5_ARATH1.231e-7266.38Protease Do-like 5, chloroplastic OS=Arabidopsis t... [more]
DEGP8_ARATH1.204e-3542.74Protease Do-like 8, chloroplastic OS=Arabidopsis t... [more]
DEGP1_ARATH4.281e-3344.85Protease Do-like 1, chloroplastic OS=Arabidopsis t... [more]
YVTA_BACSU4.025e-1533.15Uncharacterized serine protease yvtA OS=Bacillus s... [more]
DEGP_RICPR5.257e-1541.04Probable serine protease do-like OS=Rickettsia pro... [more]
DEGP_RICCN5.257e-1540.30Probable serine protease do-like OS=Rickettsia con... [more]
Y938_SYNP61.530e-1441.61Uncharacterized serine protease syc0938_d OS=Synec... [more]
HTRA_BACSU1.530e-1433.16Probable serine protease do-like htrA OS=Bacillus ... [more]
DEGP_CHLTR9.915e-1440.15Probable serine protease do-like OS=Chlamydia trac... [more]
DEGP_ECOLI1.691e-1339.44Protease do OS=Escherichia coli (strain K12) GN=de... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15E05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15E05-J9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672189 ID=CX672189; Name=CX672189; organism=Citrus sinensis; type=EST; length=786bp
ATGTTAAGCCTCCACTAAACTGAAATGAAGGCGCTACTGAGTTCGCTTCA
AACACTTCCAGTTTCAACTGCTTCAACTGATGTAAATAAGACTAAGAGCC
TTGATATTACAAGAAGAAGATCAATAGGTTTTGGTTCAAGCGCTATACTG
TCTTCTTTACTAGTCAATTTCTGCAGTCCAAGCTCAACATTGCCTTCATT
CCGCTCTGCTATTGCCCTCCAACAGAAAGACGAACTTCAGTTAGAAGAAG
ATAGAGTTGTACAACTCTTCCAGGAAACTTCACCATCGGTTGTTTCTATT
CAAGACCTTGAATTGTCTAAAAACCCAAAGAGCACTTCTAGTGAATTGAT
GCTTGTTGATGGTGAATATGCAAAAGTTGAAGGCACGGGTTCTGGCTTTG
TTTGGGATATGTTTGGTCACATCGTCACTAATTATCATGTTGTAGCCAAA
TTGGCCACAGATACAAGTGGGTTGCATCGTTGTAAGGTTTCTCTATTTGA
TGCCAAAGGCAATGGCTTTTATAGGGAGGGCAAGATGGTTGGTTATGATC
CAGCTTATGATTTAGCTGTTCTGAAGGTAGATGTTGAAGGATATGAATTG
AAGCCTGTCGTTCTGGGTACATCGCATGATTTACGTGTAGGTCAGAGTTG
CTTTGCAATTGGGAATCCTTATGGATTTGAAGACACACTTACGACAGGGG
TTGTCAGTGGACTTGGCAGGGAGATACCATCACCAAATGGAAGAGCCATT
CGAGGAGCTATCCAAACAGATGCTGCTATTAATTCA
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