CX672164

Overview
NameCX672164
Unique NameCX672164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672164_ssr478 microsatellite CX672164_ssr478:478..489. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7182 contig Csv1_Contig7182:39..636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_ARATH (Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 5.298e-79
Identity = 149/188 (79.26%), Postives = 171/188 (90.96%), Query Frame = 3
Query:   27 NSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETE 590
            ++ME+LILQLHEI AVKFGNFKLKSGI SPVYIDLRLIVSYPSLL QIS+T+ISSLP +  +D+VCGVPYTALPIAT VSVSN +PMLMRRKEIKDYGT++AIEG F+KD+ CLIIEDLVTSGASVLETA PLRA GL V+DAVVLIDR+QGGRENL ENGI+LH+MI L++MVRVL+EKGK++ E E
Sbjct:    2 SAMEALILQLHEIGAVKFGNFKLKSGIFSPVYIDLRLIVSYPSLLTQISQTLISSLPPSATFDVVCGVPYTALPIATVVSVSNGIPMLMRRKEIKDYGTSKAIEGIFEKDQTCLIIEDLVTSGASVLETAAPLRAVGLKVSDAVVLIDRQQGGRENLAENGIKLHSMIMLTDMVRVLKEKGKIEVEVE 189          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_TOBAC (Uridine 5'-monophosphate synthase (Fragment) OS=Nicotiana tabacum GN=PYR5-6 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.629e-78
Identity = 140/179 (78.21%), Postives = 166/179 (92.74%), Query Frame = 3
Query:   60 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERV 596
            +ISAVKFG FKLKSGISSP+YIDLRLIVSYPS+LRQIS+T++ SLP +TKYD+VCGVPYTALPIATC+S ++DVPMLMRRKE+KDYGTA+AIEG FK  + CLI+EDLVTSGASVLETA PLRAAGL VTDAVV+IDREQGGRENL ENGI LH+M+KL+EMV++L+EKG++ EETE++
Sbjct:    1 DISAVKFGEFKLKSGISSPIYIDLRLIVSYPSILRQISQTLVGSLPSSTKYDVVCGVPYTALPIATCISTAHDVPMLMRRKEVKDYGTAKAIEGAFKPGQACLIVEDLVTSGASVLETAAPLRAAGLTVTDAVVMIDREQGGRENLAENGITLHSMVKLTEMVKILKEKGRVSEETEKM 179          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_PONAB (Uridine 5'-monophosphate synthase OS=Pongo abelii GN=UMPS PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.606e-51
Identity = 100/183 (54.64%), Postives = 135/183 (73.77%), Query Frame = 3
Query:   42 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEET 587
            L+  L+++ A KFG+F LKSG+SSP+YIDLR IVS P LL Q++ T+  +       +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT   +EG     E CLIIED+VTSG+SVLETA  L+  GL VTDA+VL+DREQGG++ L+ +GI LH++  LS+M+ +L ++ K+D ET
Sbjct:   11 LVTGLYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADTLFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSGSSVLETAEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLEILEQQKKIDAET 193          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_MOUSE (Uridine 5'-monophosphate synthase OS=Mus musculus GN=Umps PE=2 SV=3)

HSP 1 Score: 199.904 bits (507), Expect = 7.972e-51
Identity = 98/190 (51.58%), Postives = 138/190 (72.63%), Query Frame = 3
Query:   18 MSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEE 584
            ++S ++  L+ +L+++ A KFG+F LKSG+SSPVYIDLR IVS P LL Q++  +  +       +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT   +EG     + CL+IED+VTSGASVLET   L+  GL VTDA+VL+DREQGG++ L+  GI LHA+  LS+M+ +L+++ K+D +
Sbjct:    3 VASQALGPLVTELYDVQAFKFGSFVLKSGLSSPVYIDLRGIVSRPRLLSQVADILFQTAKNAGISFDSVCGVPYTALPLATVICSANHIPMLIRRKETKDYGTKRLVEGEINPGQTCLVIEDVVTSGASVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAQGIRLHAVCTLSQMLEILQQQEKIDAD 192          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_HUMAN (Uridine 5'-monophosphate synthase OS=Homo sapiens GN=UMPS PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.360e-50
Identity = 99/192 (51.56%), Postives = 138/192 (71.88%), Query Frame = 3
Query:   15 AMSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEET 587
            A++  ++  L+  L+++ A KFG+F LKSG+SSP+YIDLR IVS P LL Q++  +  +       +D VCGVPYTALP+AT +  +N +PML+RRKE KDYGT   +EG     E CLIIED+VTSG+SVLET   L+  GL VTDA+VL+DREQGG++ L+ +GI LH++  LS+M+ +L ++ K+D ET
Sbjct:    2 AVARAALGPLVTGLYDVQAFKFGDFVLKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTKRLVEGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLEILEQQKKVDAET 193          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_BOVIN (Uridine 5'-monophosphate synthase OS=Bos taurus GN=UMPS PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 3.956e-50
Identity = 103/188 (54.79%), Postives = 139/188 (73.94%), Query Frame = 3
Query:   39 SLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEET-ERV 596
            SL+  L+++ A KFGNF LKSG+SSPVYIDLR I+S PS+L Q+++ +  +       +D VCGVPYTALP+AT V  ++++PML+RRKE KDYGT   IEG     + CLIIED+V+SG+SV ETA  L+  GL VTDAVVL+DREQGGR+NL+  GI LH++  LS ++ +L ++ K++ ET ERV
Sbjct:   10 SLVTGLYDVQAFKFGNFVLKSGLSSPVYIDLRGIISRPSILNQVAEMLFQTAENAEINFDTVCGVPYTALPLATIVCSTHEIPMLIRRKEKKDYGTKRLIEGAVNPGDTCLIIEDVVSSGSSVWETAEVLQKEGLKVTDAVVLVDREQGGRDNLQARGIRLHSVCTLSTVLCILEQQKKINAETVERV 197          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_DROME (Uridine 5'-monophosphate synthase OS=Drosophila melanogaster GN=r-l PE=2 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 6.748e-50
Identity = 96/194 (49.48%), Postives = 141/194 (72.68%), Query Frame = 3
Query:   15 AMSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLP---FTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEET 587
            A +S+ M +L L+L EI+A KFG+FK+K GI+SPVY DLR+IVSYP +++ +S  ++  +     + K+  VCGVPYTALP+AT VSV    PML+RRKE K YGT + +EG F   + CLI+ED+VTSG+S+L+T   L+  G+VVTDAVV++DREQGG  N+ ++G+ +H++  LS ++  L E G++++ T
Sbjct:    3 AQNSDKMRALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSYPDVMQTVSDLLVEHIKDKQLSAKH--VCGVPYTALPLATIVSVQQGTPMLVRRKEAKAYGTKKLVEGIFNAGDTCLIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGGVANIAKHGVRMHSLFTLSFLLNTLHEAGRIEKST 194          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_DICDI (Uridine 5'-monophosphate synthase OS=Dictyostelium discoideum GN=pyr56 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 6.316e-48
Identity = 98/190 (51.58%), Postives = 135/190 (71.05%), Query Frame = 3
Query:   30 SMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYD----LVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEET 587
            +++ L+L+L+EI A+K G FKLKSGI SP+YIDLR+ VS P LL  I++ +   +  +        LVCGVPYTALPIAT +S++N++PM++RRKE K YGT + IEG FK+ +  L++EDLVTSGASVLET   L + GL VTD VVL+DR+QG R+ L++ G  LH++  + E++  L E GKL   T
Sbjct:    2 NIKELVLKLNEIDAIKLGEFKLKSGIISPIYIDLRVTVSSPPLLAAIAEMMYQKVYKSGNAQETPALVCGVPYTALPIATGMSIANNIPMVVRRKEAKAYGTKQLIEGRFKEGDNVLVVEDLVTSGASVLETVRDLNSVGLKVTDVVVLLDRQQGARQALEKQGYRLHSVFTMEELINTLIEAGKLTGRT 191          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYRFE_ANASP (Bifunctional enzyme pyrF/pyrE OS=Anabaena sp. (strain PCC 7120) GN=pyrFE PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.490e-36
Identity = 78/192 (40.62%), Postives = 123/192 (64.06%), Query Frame = 3
Query:   18 MSSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQIS---KTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEE 584
            +  + +  LILQL++I  + FGNF   SG   P YIDLR I+S P +  Q+    + I+ +L F    D + G+PY +LP AT +++  + PM+  RKE+K +GT   IEGNF+  E+ ++++D++ SG SV+E A  L++AGL V D VV ID EQG ++ L+ NG   HA++ +SE+  VL + G++++E
Sbjct:  282 VKQHPLHDLILQLYDIDCIMFGNFVQASGAVFPYYIDLRKIISNPQVFNQVLSGYENIVKNLTF----DRLAGIPYGSLPTATGLALRLNCPMIFPRKEVKAHGTRRLIEGNFRTGEVVVVVDDILISGKSVMEGADKLKSAGLNVHDIVVFIDHEQGVKDKLQANGYRGHAVLTISEITSVLHQAGRINDE 469          
BLAST of CX672164 vs. ExPASy Swiss-Prot
Match: PYR5_NAEGR (Uridine 5'-monophosphate synthase OS=Naegleria gruberi GN=UMP PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.108e-35
Identity = 84/194 (43.30%), Postives = 129/194 (66.49%), Query Frame = 3
Query:   36 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTI--ISSLPFTTKYD--LVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAEAIEGNFKKDEI-CLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQ----GGRENLK--ENGIELHAMIKLSEMVRVLREKGKLDEE 584
            + L+L L +I A+KFG F LKSGI SP Y+DLR+I   P +LRQ S  +  + ++   T  +  ++CGVPY+AL  ++C+S++ D+PM++ RKE K YGT   +EG + K+E  C++IED++TSGAS++ETA  L   GL+VTDA+V + REQ     G   LK  E    +H  + ++E+ +VL ++GK+ +E
Sbjct:   13 KELVLDLIQIGALKFGRFTLKSGIVSPFYVDLRIIG--PKMLRQFSVLLYHVMTVKGLTNMEKRVICGVPYSALTFSSCMSMTYDLPMVICRKERKQYGTGNMVEGIYTKNETNCILIEDVITSGASIVETAEKLENEGLLVTDALVFLTREQLPLTNGMHILKKGEKVYNVHPCLTMTEVTQVLLDEGKMSQE 204          
The following BLAST results are available for this feature:
BLAST of CX672164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
PYR5_ARATH5.298e-7979.26Uridine 5'-monophosphate synthase OS=Arabidopsis t... [more]
PYR5_TOBAC2.629e-7878.21Uridine 5'-monophosphate synthase (Fragment) OS=Ni... [more]
PYR5_PONAB1.606e-5154.64Uridine 5'-monophosphate synthase OS=Pongo abelii ... [more]
PYR5_MOUSE7.972e-5151.58Uridine 5'-monophosphate synthase OS=Mus musculus ... [more]
PYR5_HUMAN1.360e-5051.56Uridine 5'-monophosphate synthase OS=Homo sapiens ... [more]
PYR5_BOVIN3.956e-5054.79Uridine 5'-monophosphate synthase OS=Bos taurus GN... [more]
PYR5_DROME6.748e-5049.48Uridine 5'-monophosphate synthase OS=Drosophila me... [more]
PYR5_DICDI6.316e-4851.58Uridine 5'-monophosphate synthase OS=Dictyostelium... [more]
PYRFE_ANASP2.490e-3640.63Bifunctional enzyme pyrF/pyrE OS=Anabaena sp. (str... [more]
PYR5_NAEGR2.108e-3543.30Uridine 5'-monophosphate synthase OS=Naegleria gru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15D04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15D04-H7-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672164 ID=CX672164; Name=CX672164; organism=Citrus sinensis; type=EST; length=598bp
CAAAAGGCCGAAATGCAATGTCGTCGAATTCGATGGAGTCATTGATTCTC
CAACTCCACGAGATCTCGGCGGTTAAATTCGGAAACTTTAAGCTAAAATC
CGGCATATCGTCTCCCGTTTACATCGACCTCCGACTTATCGTTTCTTACC
CTTCCCTCCTCCGCCAAATATCCAAAACCATCATCTCCTCCCTCCCCTTC
ACAACCAAATACGACCTCGTGTGCGGCGTTCCGTACACCGCCCTCCCAAT
CGCCACCTGCGTCTCCGTCTCCAACGACGTCCCCATGCTCATGCGGCGCA
AGGAAATCAAAGACTACGGCACCGCCGAGGCCATCGAAGGTAATTTCAAG
AAGGACGAAATCTGTCTGATCATCGAAGATTTAGTCACCAGCGGCGCGTC
GGTCCTCGAAACGGCGGTGCCATTGAGAGCGGCGGGGCTGGTGGTGACGG
ACGCCGTCGTATTGATCGACAGAGAGCAGGGAGGGAGGGAGAATCTGAAG
GAGAACGGAATTGAGTTGCATGCGATGATAAAGCTGAGCGAAATGGTTAG
GGTTTTGAGGGAGAAAGGGAAGCTTGATGAGGAAACGGAGAGAGTGGT
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