CX672137

Overview
NameCX672137
Unique NameCX672137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8941 contig Csv1_Contig8941:484..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672137 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 75/202 (37.13%), Postives = 109/202 (53.96%), Query Frame = -2
Query:  248 PISLVSQTATKYKKLFSYCLPS-SASSTGHLTFGPGASKSVQFTPLSSISGGS---SFYGLEMIGISVGGQKLSIAASVFT-----TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDF-SKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSDPTDVSIFGNTQQHTLEVVYD 823
            P+SL SQ        FSYC+ S  +SS   L  G  AS   + +P +++   S   ++Y + + GI+VGG  L I +S F      T G IIDSGT +T LP DAY  +  AF   ++      + S L TC+   S  STV +P+IS+ F GGV +++ +  I+ +     +CLA  G+S    +SIFGN QQ   +V+YD
Sbjct:  226 PLSLPSQLGVGQ---FSYCMTSYGSSSPSTLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGV-LNLGEQNILISPAEGVICLAM-GSSSQLGISIFGNIQQQETQVLYD 422          
BLAST of CX672137 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.087e-14
Identity = 70/226 (30.97%), Postives = 106/226 (46.90%), Query Frame = -2
Query:  248 CGQNNRXXXXXXXXXXXXG-RDPISLVSQT-ATKYKKLFSYCL-PSSASSTGHLTFGPGASKSVQFTPLSSISGGS---SFYGLEMIGISVGGQKLSIAASVFT------TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDF-SKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSDPTDVSIFGNTQQHTLEVVYD 886
            CG+NN+              R P+SL SQ   TK    FSYC+ P  +S+  +L  G  A+     +P +++   S   +FY + + G+SVG  +L I  S F       T G IIDSGT +T    +AY  +R  F   ++      + S  D C+   S  S + +P   + F GG ++ +       + +   +CLA   +S    +SIFGN QQ  + VVYD
Sbjct:  203 CGENNQGFGQGNGAGLVGMGRGPLSLPSQLDVTK----FSYCMTPIGSSTPSNLLLGSLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGG-DLELPSENYFISPSNGLICLAMGSSSQ--GMSIFGNIQQQNMLVVYD 421          
The following BLAST results are available for this feature:
BLAST of CX672137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP2_NEPGR1.567e-2137.13Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
NEP1_NEPGR1.087e-1430.97Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_15B12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15B12-D23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672137 ID=CX672137; Name=CX672137; organism=Citrus sinensis; type=EST; length=887bp
CAGGCCTATGGCCATACATACAATTATTTGATTGGATTGAATACTATTCA
TCTACATCTTGCAGCAGCAGTAAATTTAACTCCCATTTTTTATACAGACA
CTAATTATCATTTCCCTTTTTGTCTCCCATAGAAGTTCTTAATCTTCCAA
TATTATTCTTAAATGCTTGCATTAAGCTCGCTCACCTAATTAAATAGACT
AGCTAGCTGCAGCCACCAGCAGCAAACCCAACTTTCCCTCCGGCAACATC
ATAAACAACCTCCAAGGTATGTTGCTGCGTATTTCCGAAAATGCTCACAT
CTGTCGGATCACTATTCCCCGCAAACGCCAAACAAACCTGAGATATATTA
CTCGCGTACATAATCCCTGTCTTATCAACACTCACCTCCACACCTCCACT
GAAGAACAAGCTTATCTGAGGGAGAGTGACAGTACTATACTTACTAAAAT
CATAACATGTGTCAAGAAGCGACAGCGCGGGCGCAGTCGGATACTTGGAC
ATAAACTGACGGAATGCTGTCCGCAGAGGGGTGTATGCATCCGGAGGCAG
ACGTGTGATGACAGTTCCGGAGTCTATAATTGTACCGGCTGTAGTGAAAA
CTGACGCGGCAATGGATAGTTTTTGGCCGCCAACGCTGATTCCAATCATT
TCAAGGCCGTAGAATGATGATCCTCCAGAAATTGAGGAGAGTGGGGTGAA
CTGAACGGACTTTGATGCGCCGGGGCCGAAAGTGAGGTGACCGGTTGAGC
TGGCGGACGAAGGGAGGCAATATGAGAAGAGTTTCTTGTATTTTGTGGCT
GTTTGGGAAACTAGTGAGATTGGGTCACGGCCGAGACCCATTAAACCGGC
AGCGCCGCCGAAGAGCCCGCGGTTGTTTTGGCCGCAG
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