EY664648

Overview
NameEY664648
Unique NameEY664648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length312
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664648 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.001e-23
Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 3
Query:    6 GGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 203
            GGVAWFLGTSVLL++ASL+P F+GVSVESKS   M+SDAE WNGR AMLGLVALAFTEFVKG +LV
Sbjct:  131 GGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196          
BLAST of EY664648 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.928e-21
Identity = 43/67 (64.18%), Postives = 59/67 (88.06%), Query Frame = 3
Query:    3 DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 203
            +GGV WFL TS +L +A+L+P+++G+S E+K++GF  SDAE+WNGRFAM+GLVALAFTE+VKGG L+
Sbjct:  131 NGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197          
BLAST of EY664648 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 3
Query:    9 GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 203
            G+AWFL T+ + +VASL+PL +G SVESKS G  ++DAELWNGRFAMLGLVALA TEF+ G   V
Sbjct:  165 GLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229          
BLAST of EY664648 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 3
Query:    9 GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 203
            G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAMLGLVALA TE + G   +
Sbjct:  106 GQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170          
BLAST of EY664648 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 3
Query:    9 GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 191
            G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAM+GLVALA TE + G
Sbjct:  101 GQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
The following BLAST results are available for this feature:
BLAST of EY664648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELI_PEA1.001e-2380.30Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL7.928e-2164.18Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI5_HORVU6.282e-1866.15High molecular mass early light-inducible protein ... [more]
ELI9_HORVU7.188e-1455.38Low molecular mass early light-inducible protein H... [more]
ELI6_HORVU1.601e-1357.38Low molecular mass early light-inducible protein H... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664648 ID=EY664648; Name=EY664648; organism=Citrus sinensis; type=EST; length=312bp
CAGACGGTGGGGTTGCCTGGTTCTTGGGGACCAGTGTTTTGCTCACGGTT
GCGTCCCTGGTTCCTTTGTTTAAAGGTGTCAGCGTGGAGTCTAAATCGGA
TGGGTTCATGACTTCGGATGCTGAGTTGTGGAATGGGAGGTTTGCTATGC
TGGGCCTTGTTGCTTTGGCTTTCACCGAGTTTGTTAAGGGTGGCACCCTT
GTTTAAGCTTAATTTTGTTTAGATCTGTAGATCTGTATTTTTTTTAACTA
ATTAATGTATGAGATCCTACTGTAATTAAATCTCTATTTCTCAAAAAAAA
AAAAAAAAAAAA
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