CX672102

Overview
NameCX672102
Unique NameCX672102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672102_ssr222 microsatellite CX672102_ssr222:222..242. BLAST: Citrus ESTs to Prunus persica proteins V1
CX672102_ssr29 microsatellite CX672102_ssr29:29..48. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.216e-52
Identity = 105/212 (49.53%), Postives = 141/212 (66.51%), Query Frame = 3
Query:  246 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            +LL+AQA VWN  + + NSMSLKCA++LGIPD++HKH  PMTLSQ+  A+ I K K+   QRLMR LV+S FF ++N    +  EV Y LT ASRLLLK  P   AP + ++  PT T P++++S WFK+++ +T   FE+ +G   W  LA +      F +AM  DS+ ++ VL KD K V  G++ LVD+GGG GTMAKAI EA P MK
Sbjct:   14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSFQRLMRALVNSNFFIEEN---SNNQEVCYWLTPASRLLLKGAPLTVAPLVQVVLDPTFTNPWHYMSEWFKHENHATQ--FEAANGCTFWEKLANKPSMGRFFDEAMSCDSRLVAHVLTKDYKHVIDGIRTLVDVGGGNGTMAKAIVEAVPTMK 220          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.458e-51
Identity = 102/212 (48.11%), Postives = 139/212 (65.57%), Query Frame = 3
Query:  246 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            +LL+AQ  VWN  + + NSMSLKCA++LGIPD++HKHG+PMTLSQ+  ++ I K K  C QRLMR LV+S FF ++N  + +  EV Y LT AS LLLK+ P    P + ++  PT T P++ +S WF ++  +T   FE+ +G   W  LA E      F +AM  DS+ I+ V  KD K V +G++ LVD+GGG GTMAKAI EA P +K
Sbjct:   14 QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCFQRLMRALVNSNFFIEEN--NSNNQEVCYWLTPASCLLLKEAPLTVTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQ--FEAANGCTFWEKLANEPSKGRFFDEAMSCDSRLIAHVFTKDYKHVIEGIRTLVDVGGGNGTMAKAIVEAMPTIK 221          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.670e-39
Identity = 87/215 (40.47%), Postives = 130/215 (60.47%), Query Frame = 3
Query:  249 LLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQ--NKIDKDESEVYYSLTLASRLLLKDEPSRAA--PFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            LL AQ ++W+  F ++ SM+LK A+ L I D IH HG   +LSQI S + +  ++   ++RLMR+L  +  F  Q       D+SE  Y+LT  SRLL+  + S+ A  P   ++  PTI +PF+ L +WF+++ P  P +F+ THG+ IW     +A F  +  D + +DSQ I  V IK   EVF+G+  LVD+GGG G  A+AI++AFP +K
Sbjct:   13 LLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRVSSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQSSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPD-PCIFKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGAAAQAISKAFPHVK 226          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.859e-37
Identity = 85/212 (40.09%), Postives = 130/212 (61.32%), Query Frame = 3
Query:  246 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            E+ KAQA ++   + +I+SMSLK AV + IP++IH HG+P++LS + S L +  +K   ++RLMR L H+GFF     I K+E    Y+LT+AS LL++      AP +  +  PT++  ++ L  W   +D    T+F  T G   W  L +  ++   F DAM +DS+ I ++ ++DC  VF GL+ +VD+GGGTGT AK I E FP++K
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFF---EIITKEEES--YALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEED---LTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI-NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLK 214          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.652e-37
Identity = 85/212 (40.09%), Postives = 130/212 (61.32%), Query Frame = 3
Query:  246 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            E+ KAQA ++   + +I+SMSLK AVE+ IP++I  HG+P++LS + S L +  +K   ++RLMR L H+GFF     I K+E    Y+LT+AS LL++      AP +  +  PT++  ++ L  W   +D    T+F  T G   W  L +  ++   F DAM +DS+ I ++ ++DC  VF GL+ +VD+GGGTGT AK I E FP++K
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFF---EIITKEEES--YALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEED---LTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI-NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLK 214          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.652e-37
Identity = 85/212 (40.09%), Postives = 130/212 (61.32%), Query Frame = 3
Query:  246 ELLKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            E+ KAQA ++   + +I+SMSLK AVE+ IP++I  HG+P++LS + S L +  +K   ++RLMR L H+GFF     I K+E    Y+LT+AS LL++      AP +  +  PT++  ++ L  W   +D    T+F  T G   W  L +  ++   F DAM +DS+ I ++ ++DC  VF GL+ +VD+GGGTGT AK I E FP++K
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFF---EIITKEEES--YALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEED---LTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLI-NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLK 214          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.816e-31
Identity = 73/210 (34.76%), Postives = 115/210 (54.76%), Query Frame = 3
Query:  252 LKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            L +QA++WN  + +  S+ LKCAV+L + ++IH  G  MTLS+++S L  Q      + R+MR LVH   F + +     + E+ Y L   ++ L+K         +  IT      P+++L      +   + T FE   G +IWG +A+  +   +F +AM  DS+ I S L+K+C  +F G+  LVD+GGGTGT  + IA AFP +K
Sbjct:    8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYRVMRYLVHMKLFTKASI----DGELRYGLAPPAKYLVKGWDKCMVGSILAITDKDFMAPWHYLKDGLSGE---SGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIK 210          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26
Identity = 66/210 (31.43%), Postives = 110/210 (52.38%), Query Frame = 3
Query:  252 LKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            +KAQA VW   + + +S+ L+CAVELGI D+I  + QPM L+ +AS L +       + R++R LV       +     D+ +  Y+L   + LL ++      P +  +T     TP++ +     ++     T FE   G  IW  L        +F + M  +++ ++S LI   +++F+G+  LVD+GGG GT  KAI++AFP +K
Sbjct:   12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYRILRYLVKMEILRVEKS---DDGQKKYALEPIATLLSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNG----TAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIK 214          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.161e-23
Identity = 69/216 (31.94%), Postives = 109/216 (50.46%), Query Frame = 3
Query:  252 LKAQAQVWNCAFNYINSMSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHCIQRLMRILVHSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDP----STPTVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDC--KEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            +KAQAQVW   F +  ++ L+  V LGIPD+IH +G P+TLSQ+ + L ++          MR LVH   F      D+   E  Y LT AS+LL+       AP++ L THP   + ++ + +      P    +  +++E T G         + +   +  DAM + S F+   L+     + V  G+  +VD+GG +G +AK I +AFP +K
Sbjct:   13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNG-PVTLSQLVTHLPLKSTSIDRFHHFMRYLVHMQLFTIST--DQITKEDKYELTPASKLLVHGHQKSLAPYVMLQTHPEEFSVWSHVINVLDGKKPYWESNDTSMYEKTEG---------DPEINEILNDAMTSHSTFMLPALVSGLMKENVLDGVASIVDVGGNSGVVAKGIVDAFPHVK 216          
BLAST of CX672102 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11
Identity = 53/197 (26.90%), Postives = 91/197 (46.19%), Query Frame = 3
Query:  303 MSLKCAVELGIPDVIHKHGQPMTLSQIASALDIQKNKAHC-IQRLMRILV-HSGFFAQQNKIDKDESEVYYSLTLASRLLLKDEPSRAAPFMFLITHPTITTPFNFLSSWFKNDDPSTP--TVFESTHGKDIWGCLAQEAKFKNVFYDAMMADSQFISSVLIKDCKEVFKGLKCLVDLGGGTGTMAKAIAEAFPEMK 881
            M+LK A+EL + +++ K+G PM+ ++IAS L  +  +A   + R++R+L  +S       K+  D  E  Y L    + L K+E   +   + L+    +      + SW+   D        F   +G   +     + +F  VF + M   S      +++  K  F+GL  LVD+GGG G   K I   +P +K
Sbjct:   34 MALKSALELDLLEIMAKNGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKV-----LMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKG-FEGLTSLVDVGGGIGATLKMIVSKYPNLK 224          
The following BLAST results are available for this feature:
BLAST of CX672102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CVMT1_OCIBA2.216e-5249.53Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
EOMT1_OCIBA5.458e-5148.11Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
ZRP4_MAIZE3.670e-3940.47O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
7OMT9_MEDSA5.859e-3740.09Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA7.652e-3740.09Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA7.652e-3740.09Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
6OMT_COPJA2.816e-3134.76(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA1.225e-2631.433'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
COOMT_COPJA2.161e-2331.94Columbamine O-methyltransferase OS=Coptis japonica... [more]
OMT1_ARATH1.898e-1126.90Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_15A04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15A04-B7-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672102 ID=CX672102; Name=CX672102; organism=Citrus sinensis; type=EST; length=883bp
CATCTCCTTTCTTATCCCCTCATCTCCACTCTCCTCTCCTCTCCTCTCAT
TTTTTCAAACCAAACATCACCTTAAAGAATGGAGGTAATTCATATACTAC
GTTGACAATATTTAAGCTCGCTTCTTGTTACTGACAGATAATTCAAGAAT
CTTTAAAGGGTTCGCCAAGCTTTGAATAGCCTGAAATGGATATGAATCAT
ATGATTAATGCAGAGAGTAGTAGCAGCAGCAGCAGCAGCAGCTCTGAGCT
TCTTAAAGCTCAAGCACAGGTGTGGAATTGTGCCTTCAATTACATCAATT
CCATGTCACTAAAATGTGCCGTTGAACTTGGCATACCAGATGTTATTCAC
AAACATGGCCAGCCCATGACTCTTTCACAGATAGCTTCGGCACTCGATAT
CCAAAAAAACAAAGCTCATTGCATTCAACGCCTTATGCGGATTCTAGTTC
ACTCTGGCTTCTTTGCTCAACAAAATAAAATCGACAAAGATGAATCAGAA
GTGTATTATTCTCTTACACTAGCTTCTCGACTCCTCCTAAAGGATGAGCC
CTCGAGGGCTGCACCATTTATGTTTCTGATAACCCATCCTACAATAACGA
CTCCCTTCAATTTCTTGAGCTCTTGGTTCAAGAATGATGATCCCTCTACG
CCCACAGTGTTTGAGTCAACGCATGGGAAAGACATTTGGGGTTGTTTGGC
TCAAGAAGCTAAATTTAAAAACGTCTTTTATGATGCCATGATGGCTGACT
CTCAGTTCATATCAAGCGTTCTGATTAAAGATTGTAAGGAGGTATTCAAG
GGGCTGAAGTGTCTGGTTGATCTGGGTGGCGGCACTGGAACTATGGCCAA
AGCCATCGCAGAAGCTTTTCCTGAAATGAAATG
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