CX672095

Overview
NameCX672095
Unique NameCX672095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig261 contig Csv1_Contig261:438..1319. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.642e-65
Identity = 117/151 (77.48%), Postives = 134/151 (88.74%), Query Frame = -2
Query:  429 GNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 881
            GN WQHL+T PS ADAA+GRIAQ TKV AEGGYEKIFRQ+F+T PEEQLL ++ACYLSTSAGPV+GVLY+S+AKLA+CSD+PLSYK GD+T+WSYYKVVIPL QLKAVNPS S   PAEKYIQVISVDNHEFWFMGF++YD AV +L  +L
Sbjct:  141 GNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.305e-64
Identity = 114/151 (75.50%), Postives = 136/151 (90.07%), Query Frame = -2
Query:  429 GNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 881
            GN WQHLKTGPS+ADAAV RIAQ TK+LAEGGYEK+F+Q+FD +P+E+LLKTYACYLSTSAGPV+GV+YLST KLAF SD+PLSYK G++T WSYYKVV+P +QLKAVNPSTS+   ++KYIQVIS+DNHEFWFMGFV Y+SAVK+L  A+
Sbjct:  104 GNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAV 254          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.817e-46
Identity = 100/159 (62.89%), Postives = 115/159 (72.33%), Query Frame = -2
Query:  405 GNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGALGPRSL*CV 881
            GN WQH         AA+GRIAQ TKVLAEGGYEKIFRQ+F+TVPEEQL  ++ACYLSTSAGPV+GVLY+STAKLA+CSD  L              VVIPL QLK+VNPS S   PAEKYIQVISVD+HEFWFMGF++Y+ AV +L   L   +  CV
Sbjct:  100 GNTWQHPLR------AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL--------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTLQAGASVCV 238          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.715e-42
Identity = 77/148 (52.03%), Postives = 105/148 (70.95%), Query Frame = -2
Query:  438 NMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKV-GDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLL 878
            N+W +LKTGPS+++ A G++    K + +GG+E +FRQ F T P E L KT+ACYLST+ GPV G +YLS A++AFCSD PL +     +  WSYY+VV+PL+ +  VNP   K  P EKYIQ+ +VD H+FWFMGFV+Y+ A  +LL
Sbjct:  110 NLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLL 257          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.412e-32
Identity = 65/153 (42.48%), Postives = 102/153 (66.67%), Query Frame = -2
Query:  429 GNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDP--LSYKVGDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 881
            G +  HLK  PS++DAA+ R++Q TK++ EGG E++F++ F  +  E+LL ++ CY+ST++GPV GV+Y+S  ++AFCSD    L    G     +YYKVV+   ++ +++ ST+  KP+E+Y+ +++ D  EFWFMGFV Y  A   L  AL
Sbjct:   72 GGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKAL 224          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28
Identity = 62/147 (42.18%), Postives = 93/147 (63.27%), Query Frame = -2
Query:  429 KTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDE---TQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 860
            K GP L +    +++   K+L  GG EKI+++ F    +E+L K Y CYLST+AGP+ G+L++S+ K+AFCS+   S KV          +YKV IPL ++  VN S +  KP++KY++++++DN +FWFMGFV Y  A   L  AL
Sbjct:   69 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSE--RSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKAL 213          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28
Identity = 63/147 (42.86%), Postives = 93/147 (63.27%), Query Frame = -2
Query:  429 KTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGD---ETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 860
            K GP L +    +++   ++L  GG EKI+++ F    EE+L K Y CYLST+AGP+ G+L++S+ K+AFCS+   S KV     E    +YKV IPL ++  VN S +  KP++KY++V++VD  +FWFMGF+ Y  A   L  AL
Sbjct:   69 KLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSE--RSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQAL 213          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.493e-28
Identity = 61/146 (41.78%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  429 KTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPL--SYKVGDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 860
            K GP L +    +++   K+L  GG EKI+++ F    +E+L K Y CYLST+ G + G+L++S+ K+AFCS+  +  +   GD T+  +YKV IPL ++  VN S +  KP+++Y++V++VDN++FWFMGFV Y  A   L  AL
Sbjct:   61 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTR-VHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKAL 205          
BLAST of CX672095 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26
Identity = 63/148 (42.57%), Postives = 92/148 (62.16%), Query Frame = -2
Query:  429 KTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQWS----YYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 860
            K  P L +    +++   ++L  GG EKIF++ F     E+L K Y CYLST+AGP+ G+L++S+ K+AFCS+   S KV D  Q      +YKV IPL ++  VN S +  KP++KY++V++VD  +FWFMGF+ Y  A   L  AL
Sbjct:   68 KIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSE--RSIKV-DSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKAL 212          
The following BLAST results are available for this feature:
BLAST of CX672095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
GEM_ARATH6.642e-6577.48GLABRA2 expression modulator OS=Arabidopsis thalia... [more]
GEML1_ARATH4.305e-6475.50GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1... [more]
GEML3_ARATH1.817e-4662.89Putative GEM-like protein 3 OS=Arabidopsis thalian... [more]
GEML5_ARATH2.715e-4252.03GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g... [more]
GEML2_ARATH7.412e-3242.48GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g... [more]
GEML6_ARATH1.709e-2842.18GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g... [more]
GEML8_ARATH2.232e-2842.86Putative GEM-like protein 8 OS=Arabidopsis thalian... [more]
GEML7_ARATH6.493e-2841.78GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g... [more]
GEML4_ARATH6.077e-2642.57GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_14H09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14H09-O18-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672095 ID=CX672095; Name=CX672095; organism=Citrus sinensis; type=EST; length=882bp
ACAAGAAACTGCTTATTCTCACCAGGTACAAAGTTCAAGCCAACAAATCC
CATCCAACAACAATAGGAATCACACAGTGACTTAAAAATGAATGCAACAC
ACATAATTTGTCTAAAATATTCAATAATTTACATATGATGGTTTGTCTAC
CTAGTAATACTAGCCACCACAAAAACTTATCCTAAGAAATGCATCCCATA
ATGTGGCGTTCATGATGTTGAGAACAAAATGTGATTTGAAAATTGTACAA
AGTCACGATCCACTCCATGAATGCCATTTCACATGGCATCTCACTTGGGA
TACACTTTTTGGGATAAATTTTGCAATGACAAGCATTATTGTTTATCTAC
ATTAACAATTGGTGAATGCAACTCTCCATGACATGGTCAAATGATTTGAC
CCCAAACGCATCATAAGCTACGAGGCCCCAATGCTCCCAGAAGATTTTTC
ACCGCACTATCATAATGCACAAAGCCCATGAACCAAAACTCATGGTTGTC
AACAGAGATGACCTGGATATATTTCTCAGCTGGCTTGGCTTTGCTTGTTG
AGGGATTGACTGCCTTCAGCTGACTCAATGGAATAACCACCTTATAATAG
CTCCATTGCGTCTCATCACCTACTTTGTAAGACAGAGGGTCATCACTACA
AAATGCAAGCTTTGCAGTTGACAAATATAAAACTCCCACTACGGGACCGG
CAGATGTGGATAGGTAGCATGCGTAAGTCTTCAGAAGTTGTTCCTCAGGA
ACAGTGTCAAAACTTTGTCGAAAGATCTTCTCGTATCCACCTTCAGCGAG
CACTTTTGTTCTCTGTGCAATTCTTCCCACGGCAGCATCAGCAAGACTAG
GGCCAGTTTTCAAGTGCTGCCACATATTGCCG
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