CX672087

Overview
NameCX672087
Unique NameCX672087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5133 contig Csv1_Contig5133:1..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_NICPL (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 1.740e-115
Identity = 201/221 (90.95%), Postives = 212/221 (95.93%), Query Frame = 2
Query:   62 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            MAGNG+F +I++GDVFKYY++GEWKKS SGKSV I+NPTTR+T YKVQAC+QEEVNKVME AK AQK WAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEV+RSGDLVSY AEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVA LHMVHCFHLAGFPKGLISCV
Sbjct:    1 MAGNGVFVDIIEGDVFKYYSEGEWKKSASGKSVAIINPTTRKTQYKVQACTQEEVNKVMEVAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYTAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVACLHMVHCFHLAGFPKGLISCV 221          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_PEA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Pisum sativum GN=GAPN PE=1 SV=1)

HSP 1 Score: 414.846 bits (1065), Expect = 2.273e-115
Identity = 201/221 (90.95%), Postives = 212/221 (95.93%), Query Frame = 2
Query:   62 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            MA  G+ AEI+DGDV+KYYADGEWKKS SGKSV I+NPTTR+  YKVQACSQEEVNKVM++AK+AQK WAKTPLWKRAELLHKAAAILKEHKA IAECLVKEIAKPAKDAVTEV+RSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALIAGNS+VLKPPTQGAVAALHMVHCFHLAGFPKGLISCV
Sbjct:    1 MAATGVLAEIIDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 221          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_APIGR (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 404.831 bits (1039), Expect = 2.352e-112
Identity = 192/221 (86.88%), Postives = 210/221 (95.02%), Query Frame = 2
Query:   62 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            MAG+G++A+I++GDVFKYY+DGEWKKS+SGKSV I+NPTTR T +KVQAC+QEEVNK ME AK  QK WAKTPLWKRAELLHKAAAILKEHKA IA+CLVKEIAKPAKD+VTEV+RSGDLVSYCAEEGVR+LGEGKFLVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKI PALIAGN+LVLKPPTQGAVA LHMVHCFHLAGFPKGLISC+
Sbjct:    1 MAGSGVYADIIEGDVFKYYSDGEWKKSSSGKSVAIINPTTRMTQFKVQACTQEEVNKAMETAKKVQKQWAKTPLWKRAELLHKAAAILKEHKAAIADCLVKEIAKPAKDSVTEVVRSGDLVSYCAEEGVRLLGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIGPALIAGNALVLKPPTQGAVACLHMVHCFHLAGFPKGLISCI 221          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_ARATH (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Arabidopsis thaliana GN=ALDH11A3 PE=1 SV=2)

HSP 1 Score: 401.364 bits (1030), Expect = 2.601e-111
Identity = 193/221 (87.33%), Postives = 211/221 (95.48%), Query Frame = 2
Query:   62 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            MAG G+FAEILDG+V+KYYADGEWK S+SGKSV I+NP TR+T YKVQAC+QEEVN VME AK+AQK WAKTPLWKRAELLHKAAAILK++KAP+AE LVKEIAKPAKD+VTEV+RSGDL+SYCAEEGVRILGEGKFL+SDSFPGN+RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAV+ LHMVHCFHLAGFPKGLISC+
Sbjct:    1 MAGTGLFAEILDGEVYKYYADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAKSAQKSWAKTPLWKRAELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILGEGKFLLSDSFPGNDRTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVSCLHMVHCFHLAGFPKGLISCI 221          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 397.127 bits (1019), Expect = 4.905e-110
Identity = 192/221 (86.88%), Postives = 208/221 (94.12%), Query Frame = 2
Query:   62 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            MAG G+FA++LDG+V+KYYADGEW+ S SGK+V IVNPTTR+T Y+VQAC+QEEVNKVM+AAK AQK WA+TPLWKRAELLHKAAAILKEHK PIAE LVKEIAKPAKDAV+EV+RSGDLVSY AEEGVRILGEGK LVSDSFPGNER KYCL+SK+PLGVVLAIPPFNYPVNLAVSKI PALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV
Sbjct:    1 MAGTGVFADVLDGEVYKYYADGEWRASASGKTVAIVNPTTRQTQYRVQACTQEEVNKVMDAAKVAQKSWARTPLWKRAELLHKAAAILKEHKTPIAESLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 221          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_MAIZE (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 5.423e-109
Identity = 189/221 (85.52%), Postives = 207/221 (93.67%), Query Frame = 2
Query:   62 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            +AG G+FAEILDG+V++YYADGEW+ S SGKSV IVNPTTR+T Y+VQAC+QEEVNK M+AAK AQK WA+TPLWKRA++LHKAAAILKEHKAPIAECLVKEIAKPAKDAV+EV+RSGDLVSY AEEGVRILGEGK +VSDSFPGNER KYCL+SKIPLGVVLAIPPFNYP NLA SKI PALIAGN+LVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV
Sbjct:    3 LAGTGVFAEILDGEVYRYYADGEWRTSASGKSVAIVNPTTRKTQYRVQACTQEEVNKAMDAAKVAQKAWARTPLWKRADVLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLVVSDSFPGNERNKYCLSSKIPLGVVLAIPPFNYPANLAGSKIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 223          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.321e-43
Identity = 99/206 (48.06%), Postives = 128/206 (62.14%), Query Frame = 2
Query:  107 FKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            +K Y +GEWK S   + + I  P T      V A SQEEV+ V  +AKAAQK W      +RAE LHKAA IL      I   L KEIAK  K AV EVIR+ ++++Y AEEGVR+  EG+ L   SF    + K  +  + P+G+VLAI PFNYP+NLA SKIAPALI+GN + LKPPTQG+++ L +   F  AG P G+ + +
Sbjct:    5 YKNYVNGEWKLSK--EEIKIYAPATGEELGSVPAMSQEEVDYVYASAKAAQKAWRALSYVERAEYLHKAADILMRDAEKIGAVLSKEIAKGYKSAVGEVIRTAEIINYAAEEGVRL--EGEVLEGGSFDPASKKKIAIVRREPVGLVLAISPFNYPINLAGSKIAPALISGNVVALKPPTQGSISGLLLAEAFAEAGLPAGVFNTI 206          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: GAPN_STRMU (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus mutans GN=gapN PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40
Identity = 92/206 (44.66%), Postives = 124/206 (60.19%), Query Frame = 2
Query:  107 FKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            +K Y +GEWK S +   + I  P +      V A S EEV+ V  +AK AQ  W      +RA  LHK A IL   K  I   L KE+AK  K AV+EV+R+ ++++Y AEEG+R+  EG+ L   SF    + K  +  + P+G+VLAI PFNYPVNLA SKIAPALIAGN +  KPPTQG+++ L +   F  AG P G+ + +
Sbjct:    5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYIERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTI 206          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.851e-33
Identity = 79/204 (38.73%), Postives = 117/204 (57.35%), Query Frame = 2
Query:  116 YADGEWKKSNSGKSVPIVNPTTRRTHYK-VQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            Y +G W  S S    P +NP  R      VQ  + E+VN+ + AA  AQ  W K    +R E L+KAA IL++    IAE + +E+ K   +A  E +R   ++ Y A EG R +G       D  P ++      T+++PLGVV  I P+N+PV + + K+APAL+ GN++VLKP ++ AV A  ++ CFH AGFPKG+++ V
Sbjct:   13 YINGNWVSSVSNNVEPSINPANRHDIVGYVQRSTLEDVNEAVTAANEAQTSWWKRSGVERGEYLYKAAHILEQCLQDIAETMTREMGKTLAEAKAETMRGVHILRYYAGEGARKIG-------DVIPSSDSEGLLFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVLKPASETAVTAAKVIECFHEAGFPKGVVNMV 209          
BLAST of CX672087 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.491e-29
Identity = 73/213 (34.27%), Postives = 115/213 (53.99%), Query Frame = 2
Query:   89 ILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYK-VQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCV 724
            I + + +  + +GEW KS SG  V + NP         VQ  + E+V + + AA  A+  W K    +R + L+K A I+++    IA C  +E+ K   +A  E  R   ++ Y A EG+R  G       D  P  ++     T+++PLGVV  I P+N+PV + + K+APAL+ GN++V+KP T+ AV    ++ CF  AG P G+I+ V
Sbjct:    4 ITEQNTYLNFINGEWVKSQSGDMVKVENPADVNDIVGYVQNSTAEDVERAVTAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGKTLPEAKGETARGIAILRYYAGEGMRKTG-------DVIPSTDKDALMFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVIKPATETAVTCAKIIACFEEAGLPAGVINLV 209          
The following BLAST results are available for this feature:
BLAST of CX672087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GAPN_NICPL1.740e-11590.95NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_PEA2.273e-11590.95NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_APIGR2.352e-11286.88NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_ARATH2.601e-11187.33NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_WHEAT4.905e-11086.88NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_MAIZE5.423e-10985.52NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STREI2.321e-4348.06NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STRMU1.408e-4044.66NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
ALDH_BACST4.851e-3338.73Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
ALDH1_BACSU2.491e-2934.27Probable aldehyde dehydrogenase ycbD OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14H03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14H03-O6-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672087 ID=CX672087; Name=CX672087; organism=Citrus sinensis; type=EST; length=725bp
CTTCAGTCTTCAGTTGACCTTCTTCAACTAGTTTACTCTGTTGGGTGGTT
CATTGTGAGAAATGGCTGGCAATGGTATTTTTGCTGAGATTTTAGATGGG
GACGTGTTCAAGTACTATGCTGATGGCGAATGGAAGAAGTCTAATTCTGG
CAAAAGCGTTCCCATTGTCAACCCCACTACTCGCAGAACTCACTACAAAG
TTCAGGCTTGTTCACAAGAGGAGGTGAACAAGGTAATGGAAGCAGCAAAA
GCTGCACAAAAATTATGGGCAAAGACTCCGCTTTGGAAGAGAGCTGAGCT
CCTGCACAAGGCTGCTGCAATTCTCAAAGAGCACAAGGCCCCCATTGCTG
AGTGTTTGGTTAAAGAAATTGCAAAGCCAGCGAAAGATGCTGTCACTGAG
GTTATAAGGTCTGGAGATTTGGTCTCTTATTGTGCCGAAGAGGGTGTTCG
GATTCTCGGAGAAGGGAAGTTTTTGGTGTCTGATAGCTTCCCCGGAAATG
AGAGGACTAAGTATTGTCTCACTTCAAAGATTCCACTTGGTGTGGTTTTG
GCCATTCCACCATTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTGC
TCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAGG
GTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTTT
CCTAAAGGCCTTATAAGCTGTGTCA
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