CX672034

Overview
NameCX672034
Unique NameCX672034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5126 contig Csv1_Contig5126:1..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 8.067e-112
Identity = 195/221 (88.24%), Postives = 210/221 (95.02%), Query Frame = -3
Query:  285 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGDLSGED 947
            SM+PL LE+V+ GQYKGH+ G+KSYPAYTDDPTVP GS+TPTF+AAALFI+NARWDGVPFLMKA KALHTKRAEIRVQFRHVPGNLYKRNFGTD+DKATN+LVLRLQP EAIYLKINNKVPGLGMRLD SDLNLLY+++Y  EIPDAYERL+LDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKI PELYPYGSRGPV AHYLAAKHNVRWGDLSG+D
Sbjct:  357 SMRPLQLEDVVLGQYKGHSNGAKSYPAYTDDPTVPNGSITPTFSAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDMDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNLLYKAKYRGEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGDD 577          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PDC_SPIOL (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.574e-107
Identity = 188/222 (84.68%), Postives = 205/222 (92.34%), Query Frame = -3
Query:  282 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGDLSGEDS 947
            SM+PL L++V+ GQYKGH+KG+KSY  YTDDPTVP  S+TPTF AAALFI+NARWDGVPFLMKA KALHTKRAEIRVQFRHVPGNLYK+ FGTDLDKATN+LVLR+QP EAIYLKINNKVPGLGMRLD +DLNL Y +RY  EIPDAYERL+LDAIEGERRLFIRSD+LDAAW+LFTPLLKELEEKK+ PELYPYGSRGPV AHYLAAKHNVRWGDLSGEDS
Sbjct:  353 SMKPLKLQDVVVGQYKGHSKGNKSYSGYTDDPTVPNNSVTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKKTFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRTDLNLCYSTRYRGEIPDAYERLLLDAIEGERRLFIRSDKLDAAWSLFTPLLKELEEKKVAPELYPYGSRGPVGAHYLAAKHNVRWGDLSGEDS 574          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 379.793 bits (974), Expect = 1.247e-104
Identity = 182/217 (83.87%), Postives = 199/217 (91.71%), Query Frame = -3
Query:  297 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGDL 947
            SM+PL LE+V+ GQYKGHNKG K+YP YTDDPTVP  SLTPTF AAA+FINNARWDGVPFLMKA KALHT+ AEIRVQFRHVPGNLYK++F T+LD ATN+LV+R+QP E IYL+INNKVPGLGMRLD SDLNLLYRSRYP EIPDAYERL+LDAIEGERRLFIRSDELDAAW LFTP LKELEEKKI+PELYPYGSRGPV AHYLA+K+NVRWGDL
Sbjct:  357 SMKPLRLEDVVVGQYKGHNKGGKTYPGYTDDPTVPNHSLTPTFAAAAMFINNARWDGVPFLMKAGKALHTRGAEIRVQFRHVPGNLYKKSFATNLDNATNELVIRVQPDEGIYLRINNKVPGLGMRLDRSDLNLLYRSRYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWDLFTPALKELEEKKIIPELYPYGSRGPVGAHYLASKYNVRWGDL 573          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD2_ARATH (Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 1.427e-100
Identity = 176/218 (80.73%), Postives = 197/218 (90.37%), Query Frame = -3
Query:  294 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGDLS 947
            SM+P+ +E+V+ GQYK H KG  +YPAYTDD TVPKGSLTPTF AAALFI+NARWDGVPFLMKA KALHT+ AEIRVQFRHVPGNLY RN G+DLD+ATN+LV+R+QP EAIYLKINNKVPGLGMRLD S+LNLLY +RY  EIPDAYERL+LDAIEGERRLFIRSDELDAAW+LFTPLLKE+EEKK +PE YPYGSRGPV AHYLAAKH V+WGD+S
Sbjct:  376 SMRPIRVEDVVIGQYKSHTKGGVTYPAYTDDKTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTRSAEIRVQFRHVPGNLYNRNTGSDLDQATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPLLKEIEEKKRIPEYYPYGSRGPVGAHYLAAKHKVQWGDVS 593          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PDC_TOBAC (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.578e-99
Identity = 174/217 (80.18%), Postives = 196/217 (90.32%), Query Frame = -3
Query:  297 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGDL 947
            SM+PL L++V+ GQYK H KG  +YP YTDD TVPK SLTPTF AAALFI+NARWDGVPFLMKA KALHT+ AEIRVQFRHVPGNLY +NFG+DLD+ATN+LV+R+QP EAIYLKINNKVPGLGMRLD S+LNLLY +RY  EIPDAYERL+LDAIEGERRLFIRSDELDAAW+LFTP+LKELE+KKIVPE YPYGSRGP+ AHYLAA++ VRWGDL
Sbjct:  376 SMRPLQLDDVIIGQYKCHTKGDVTYPGYTDDKTVPKDSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTRSAEIRVQFRHVPGNLYNKNFGSDLDQATNELVIRVQPNEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPVLKELEDKKIVPEYYPYGSRGPIGAHYLAARYKVRWGDL 592          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD3_ARATH (Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=At1g24280 PE=2 SV=2)

HSP 1 Score: 360.918 bits (925), Expect = 5.996e-99
Identity = 175/218 (80.28%), Postives = 194/218 (88.99%), Query Frame = -3
Query:  294 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGDLS 947
            SM+P+ LE+V+ GQYK H+ G  +YP+YTDD TVPKGSLTPTF AAALFI+NARWDGVPFLMKA KAL+T+ AEIRVQFRHVPGNLY RN GTD D+ TN+LV+R+QP EAIYLKINNKVPGLGMRLD S+LNLLY +RY  EIPDAYERL+LDAIEGERRLFIRSDELDAAWALFTPLLKE+EEKK  PE YPYGSRGPV AHYLAAKH V+WGDLS
Sbjct:  379 SMRPIKLEDVVIGQYKSHSIGGVTYPSYTDDKTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALNTRSAEIRVQFRHVPGNLYNRNSGTDRDQTTNELVIRVQPDEAIYLKINNKVPGLGMRLDQSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIEEKKTTPEFYPYGSRGPVGAHYLAAKHKVQWGDLS 596          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.217e-60
Identity = 111/208 (53.37%), Postives = 148/208 (71.15%), Query Frame = -3
Query:  300 NVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGD 923
            +V+ GQYK  ++         D   V    + PT+ AAAL+I+NARWDGVPFL++    L   R EI VQFRHVPGNLY+ N G ++D  TN+L+LR +P EAI +KINNKVPGLG++LD S+LNLLY+ RY TE+PD+YE L+ D I+G+  LF+RSDE+ AAW + +P+L+E+++    PELY +G RGPV A+YL AKH V W D
Sbjct:  426 DVILGQYKSSSR---------DKNGVILNGVDPTYCAAALYIDNARWDGVPFLVRVGTGLIKHRVEIHVQFRHVPGNLYRENIGINIDLGTNELILRDEPDEAILVKINNKVPGLGLQLDASELNLLYKDRYKTEVPDSYEHLIHDVIDGDNHLFMRSDEVAAAWNILSPVLEEIDKHHTAPELYEFGGRGPVAAYYLWAKHGVPWAD 624          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_DICDI (Glucose-6-phosphate 1-dehydrogenase OS=Dictyostelium discoideum GN=g6pd-1 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.655e-51
Identity = 100/209 (47.85%), Postives = 144/209 (68.90%), Query Frame = -3
Query:  321 MQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPT-EIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAK 944
            +QP+ +  V+ GQY    +G    PAY DD  VPK S TPT+ AA   INN RW G+PF++K  KAL  ++ E+R+QF+     L+     +D D + N+LV+R+QPGEA+YLK+ +K PGL  +++ ++L+L YR R+   ++PDAYERL+LD+I+G+  LF+R DELD AW +FTPLL ++E++KI PE Y +GSRGP  A  L+ K
Sbjct:  275 IQPIKMSEVVLGQYTSDPEGK--IPAYLDDEGVPKDSTTPTYAAAVFHINNPRWRGMPFILKCGKALDERKTEVRIQFKRPDNFLF-----SDDDISRNELVMRIQPGEAVYLKLLSKKPGLENKIEQTELDLSYRHRFENLDLPDAYERLILDSIKGDHNLFVRDDELDVAWQIFTPLLDQIEKEKIKPEPYSFGSRGPKSADELSKK 476          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_ASPNG (Glucose-6-phosphate 1-dehydrogenase OS=Aspergillus niger GN=gsdA PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.941e-50
Identity = 103/221 (46.61%), Postives = 147/221 (66.52%), Query Frame = -3
Query:  291 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEE-KKIVPELYPYGSRGPVRAHYLAAKHNVRWGDLSG 947
            +M  +  +NV+ GQY     GSK  PAY +D TVP+ S  PTF A   +I N RWDGVPF+MKA KAL+ ++ EIR+QFR V   ++K       D   N+LV+R+QP E++Y+K+N+K+PGL M+   ++L+L YR R+   +IP+AYE L+LDA++G+   F+R DELDA+W +FTPLL  L++ K+I+P  YPYGSRGP       A    ++ D +G
Sbjct:  287 AMDAIEPKNVIIGQYGKSLDGSK--PAYKEDETVPQDSRCPTFCAMVAYIKNERWDGVPFIMKAGKALNEQKTEIRIQFRDVTSGIFK-------DIPRNELVIRVQPNESVYIKMNSKLPGLSMQTVVTELDLTYRRRFSDLKIPEAYESLILDALKGDHSNFVRDDELDASWRIFTPLLHYLDDNKEIIPMEYPYGSRGPAVLDDFTASFGYKFSDAAG 498          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_EMENI (Glucose-6-phosphate 1-dehydrogenase OS=Emericella nidulans GN=gsdA PE=3 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 6.722e-50
Identity = 102/221 (46.15%), Postives = 148/221 (66.97%), Query Frame = -3
Query:  291 SMQPLLLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEE-KKIVPELYPYGSRGPVRAHYLAAKHNVRWGDLSG 947
            +M P+  ++V+ GQY     GSK  PAY +D TVP+ S  PTF A    I N RWDGVPF+MKA KAL+ ++ EIR+QF+ V   ++K       D   N+LV+R+QP E++Y+K+N+K+PGL M+   ++L+L YR R+   +IP+AYE L+LDA++G+   F+R DELDA+W +FTPLL  L++ K+I+P  YPYGSRGP       A +  ++ D +G
Sbjct:  287 AMDPIQPKDVIIGQYGRSLDGSK--PAYKEDDTVPQDSRCPTFCALVAHIKNERWDGVPFIMKAGKALNEQKTEIRIQFKDVTSGIFK-------DIPRNELVIRVQPNESVYIKMNSKLPGLSMQTVVTELDLTYRRRFSDLKIPEAYESLILDALKGDHSNFVRDDELDASWRMFTPLLHYLDDNKEIIPMEYPYGSRGPSVLDDFTASYGYKFSDAAG 498          
The following BLAST results are available for this feature:
BLAST of CX672034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
G6PDC_SOLTU8.067e-11288.24Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PDC_SPIOL1.574e-10784.68Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD1_ARATH1.247e-10483.87Glucose-6-phosphate 1-dehydrogenase 1, chloroplast... [more]
G6PD2_ARATH1.427e-10080.73Glucose-6-phosphate 1-dehydrogenase 2, chloroplast... [more]
G6PDC_TOBAC1.578e-9980.18Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD3_ARATH5.996e-9980.28Glucose-6-phosphate 1-dehydrogenase 3, chloroplast... [more]
G6PD4_ARATH3.217e-6053.37Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PD_DICDI4.655e-5147.85Glucose-6-phosphate 1-dehydrogenase OS=Dictyosteli... [more]
G6PD_ASPNG3.941e-5046.61Glucose-6-phosphate 1-dehydrogenase OS=Aspergillus... [more]
G6PD_EMENI6.722e-5046.15Glucose-6-phosphate 1-dehydrogenase OS=Emericella ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E11-I22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672034 ID=CX672034; Name=CX672034; organism=Citrus sinensis; type=EST; length=949bp
CATTTATTCACAAATCTTAAATTTCCTTTTATACGCCTATTATTATTCAT
CCTGTTTACACTGATCACCAACTTACAATCAAATTCAAATCATTCAACCT
TCCAAATGATACATCATCCATAAGAATTCAAGCCCCGGTACCATGTAGGT
CAAGGAAAATTGCACCATAGCACAAATTTCAGGCACCGGAATGAGTAACT
GCTGTGCTGTTCATATAACCAGCCCTGTCATGGGTTTATGGTGAATAAGT
ATGTAAAACAACCCGAGTTTTTGGCCATTCATGAATCCTCTCCACTAAGA
TCTCCCCATCGAACATTGTGCTTGGCAGCAAGATAATGTGCTCTAACTGG
TCCTCGGCTACCATAAGGATAGAGCTCTGGAACAATCTTCTTCTCTTCCA
GTTCCTTCAGTAATGGTGTAAACAACGCCCAGGCAGCATCAAGCTCATCA
CTCCGAATAAACAACCTCCGTTCACCTTCTATTGCATCTAAGACCAGCCT
CTCATATGCATCTGGTATTTCTGTTGGATACCTTGATCGATAAAGCAAAT
TAAGGTCGCTGCAATCCAATCTCATTCCAAGACCAGGAACTTTGTTGTTG
ATCTTCAAGTATATAGCTTCACCAGGCTGGAGTCGGAGCACAAGCTTATT
TGTAGCCTTGTCTAAGTCAGTTCCAAAATTCCGCTTGTACAGGTTTCCAG
GGACATGTCTGAACTGAACTCTGATCTCTGCACGTTTGGTATGGAGCGCT
TTGACTGCTTTCATCAGGAAAGGAACCCCATCCCATCTTGCATTGTTGAT
AAAAAGAGCAGCCGCGGTAAATGTTGGCGTGAGACTACCCTTTGGCACAG
TTGGGTCATCAGTATATGCAGGATATGATTTACTACCCTTGTTGTGGCCC
TTGTATTGACCAANCATTACATTTTCAAGCAGAAGTGGTTGCATTGATC
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