CX672026

Overview
NameCX672026
Unique NameCX672026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length460
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12869 contig Csv1_Contig12869:54..513. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX672026 vs. ExPASy Swiss-Prot
Match: GLYK_ARATH (D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana GN=GLYK PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 9.686e-40
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = -3 
Query:  171 NKNLEAYFDAWDKFIKAWIVIKIKDPSCVYEWRLQAEIAMREAGNPGMSDEEVKDFVSRYLPAYHAYLPTLYSEGPNGSDPEHTLIIEIDDGRNPI 458
            NKNLEAY+DAWDK+I AW+VIKI+DPS VY WRLQAEIAMR+ G  GMSDEEV DFVSRYLPAY AYLPTLY+EGP+GSDP+  L I+ID+ RNPI
Sbjct:  358 NKNLEAYYDAWDKYIDAWVVIKIQDPSYVYRWRLQAEIAMRQDGQAGMSDEEVNDFVSRYLPAYKAYLPTLYAEGPSGSDPDRVLAIDIDEERNPI 453
The following BLAST results are available for this feature:
BLAST of CX672026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GLYK_ARATH9.686e-4077.08D-glycerate 3-kinase, chloroplastic OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_14E07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E07-I14-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672026 ID=CX672026; Name=CX672026; organism=Citrus sinensis; type=EST; length=460bp
TTTTTTTTAAATAAATAATATTTATTCAATTGAATATTGCTATCATACAC
TAATTTACATTTGCATTTACAGTGATTTCTGGACATTTTTATTGTTAAGT
AGCAATTGGCTTAGCAATAGACATGTCAACTGAGAAACCAAAATTGGAAA
TAGTTTTCACAAGTTACCTAAATAGGATTCCTCCCATCATCAATTTCAAT
AATTAGCGTATGTTCCGGATCTGATCCGTTAGGTCCTTCGGAATAGAGGG
TGGGAAGGTAAGCGTGGTATGCGGGAAGGTAGCGTGAAACAAAATCCTTC
ACCTCCTCATCGGACATCCCAGGATTGCCTGCCTCCCTCATTGCAATCTC
AGCCTGCAAACGCCACTCGTACACACAACTTGGATCCTTGATTTTGATAA
CAATCCATGCCTTAATGAATTTGTCCCATGCGTCAAAGTAAGCTTCCAGA
TTTTTATTCA
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