CX672025

Overview
NameCX672025
Unique NameCX672025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 4.935e-68
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  215 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            QP    NQRIARI+AHLHPP  Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AV
Sbjct:    2 QPIPDVNQRIARISAHLHPPKSQME-ESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 96          

HSP 2 Score: 124.405 bits (311), Expect = 4.935e-68
Identity = 58/64 (90.62%), Postives = 62/64 (96.88%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            VRGFLGQQQLE ALTGMD++I+PAGVPRKPGMTRDDLF INAGIVKTLCEGIAKCCP+AIVNLI
Sbjct:   97 VRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLI 160          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.427e-67
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 2
Query:  215 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            QP    NQRIARI+AHLHPP  Q+E ESS L R +CRAKGG+PGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDT AV
Sbjct:    2 QPIPDVNQRIARISAHLHPPKYQME-ESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 96          

HSP 2 Score: 123.635 bits (309), Expect = 1.427e-67
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            VRGFLGQQQLE ALTGMD+V+IPAGVPRKPGMTRDDLF INAGIVKTLCEGIAKCCP AIVNLI
Sbjct:   97 VRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLI 160          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.418e-64
Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 2
Query:  233 NQRIARIAAHLHPPTLQIE-GESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            NQRIARI+AHL+PP L  +  + SGL R+ CRAKGGSPGFKVA+LGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTADISHMDT+AV
Sbjct:    4 NQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAV 94          

HSP 2 Score: 120.939 bits (302), Expect = 1.418e-64
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 1
Query:  547 SRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            S  VRGFLGQ QLE+ALTGMD+VIIPAGVPRKPGMTRDDLFNINAGIV+TL E IAKCCPKAIVN+I
Sbjct:   92 SAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNII 158          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.684e-62
Identity = 68/91 (74.73%), Postives = 81/91 (89.01%), Query Frame = 2
Query:  230 ANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            ANQRIARI+AHL P   Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AV
Sbjct:    7 ANQRIARISAHLTP---QMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAV 94          

HSP 2 Score: 122.865 bits (307), Expect = 1.684e-62
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            VRGFLG +QLEDALTGMD+VIIPAG+PRKPGMTRDDLF INAGIVKTLCEG+AKCCP AIVNLI
Sbjct:   95 VRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLI 158          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.868e-62
Identity = 67/92 (72.83%), Postives = 81/92 (88.04%), Query Frame = 2
Query:  230 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            AN+RIA I+AHL P  T Q+E ++S +GR +CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AV
Sbjct:    7 ANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAV 98          

HSP 2 Score: 123.25 bits (308), Expect = 4.868e-62
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            VRGFLG +QLEDALTGMD+VIIPAGVPRKPGMTRDDLF INAGIVKTLCEG+AKCCP AIVNLI
Sbjct:   99 VRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLI 162          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.407e-61
Identity = 68/96 (70.83%), Postives = 76/96 (79.17%), Query Frame = 2
Query:  215 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            +  SGA+ RI+RIA HL P       +   L R DCRAKGG  GFKVA+LGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT+DISHMDT AV
Sbjct:    2 EANSGASDRISRIAGHLRPQ----REDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAV 93          

HSP 2 Score: 125.946 bits (315), Expect = 1.407e-61
Identity = 60/64 (93.75%), Postives = 62/64 (96.88%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            VRGFLGQQQLEDAL GMD+VIIPAGVPRKPGMTRDDLFNINAGIVKTLCE IAKCCPKAIVN+I
Sbjct:   94 VRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVI 157          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 9.014e-61
Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 2
Query:  215 QPTSGANQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            +  + A +R+ R+A+HL PP  Q+E ES  L   +CRAKG +PGFKVA+LGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGVTADISHM+T AV
Sbjct:    2 EDAAAAARRMERLASHLRPPASQME-ESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAV 96          

HSP 2 Score: 123.25 bits (308), Expect = 9.014e-61
Identity = 58/64 (90.62%), Postives = 62/64 (96.88%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            VRGFLGQ QLE+ALTGMD+VIIPAGVPRKPGMTRDDLFNINAGIV+TLCEGIAKCCP AIVN+I
Sbjct:   97 VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVI 160          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.528e-60
Identity = 65/92 (70.65%), Postives = 78/92 (84.78%), Query Frame = 2
Query:  230 ANQRIARIAAHLHPP-TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV 502
            A +RIA I+AHL P  T Q+E ++S +G   CRAKGG+PGFKVA+LGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDT AV
Sbjct:    7 AYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAV 98          

HSP 2 Score: 122.094 bits (305), Expect = 7.528e-60
Identity = 57/64 (89.06%), Postives = 61/64 (95.31%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            VRGFLG +QLEDALTGMD+VIIPAGVPRKPGMTRDDLF INAGIV+TLCEG+AKCCP AIVNLI
Sbjct:   99 VRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLI 162          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.905e-38
Identity = 47/64 (73.44%), Postives = 55/64 (85.94%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            V G++G++QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK+LC  IAK CP A+VN+I
Sbjct:   87 VAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNAVVNMI 150          

HSP 2 Score: 78.9518 bits (193), Expect = 1.905e-38
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 2
Query:  341 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
            P  KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T +
Sbjct:   33 PERKVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRS 85          
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.212e-38
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 1
Query:  556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
            V G++G++QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK+LC  IAK CP A++N+I
Sbjct:   87 VTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALINMI 150          

HSP 2 Score: 78.9518 bits (193), Expect = 4.212e-38
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 2
Query:  341 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
            P  KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T +
Sbjct:   33 PERKVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRS 85          
The following BLAST results are available for this feature:
BLAST of CX672025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
MDHG_CITLA4.935e-6881.25Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA1.427e-6781.25Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG2_ARATH1.418e-6480.22Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG1_ARATH1.684e-6274.73Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_BRANA4.868e-6272.83Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG_SOYBN1.407e-6170.83Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG_ORYSJ9.014e-6168.75Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG1_BRANA7.528e-6070.65Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHM_EUCGU1.905e-3873.44Malate dehydrogenase, mitochondrial OS=Eucalyptus ... [more]
MDHM_CITLA4.212e-3871.88Malate dehydrogenase, mitochondrial OS=Citrullus l... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E06-I12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672025 ID=CX672025; Name=CX672025; organism=Citrus sinensis; type=EST; length=748bp
GATAAGATGATCACTAGTCAGCTTCCACGCATCCCAATTCTTGCATCGGA
GCTCTCTCCCTCACGTCACCATTCTAGTCAGCAATCTCAGCTCTTTGTTT
TCATAATTATAAATTAAAAAACAGAAGTAGCTGTAGCACCACCGCATCAA
TTTCATTTTCTGTGAATTGTTTGTTTTATCACAACTAAGTCTCCAGAAAC
TCAGAACCATGCAGCAGCCAACTTCAGGAGCAAATCAACGCATTGCGAGA
ATCGCTGCTCATCTCCATCCACCAACTCTCCAGATAGAGGGAGAGAGTTC
GGGTTTGGGGCGGATGGATTGCAGGGCAAAAGGCGGGTCGCCCGGATTCA
AGGTGGCTGTATTGGGAGCTGCTGGAGGGATTGGACAGCCTCTGGCTATG
TTGATGAAGATCAATCCCTTGGTTTCAGTTCTTCATCTTTATGATGTTGT
CAATACTCCTGGGGTTACTGCCGATATCAGTCACATGGATACAAATGCTG
TGTGATCATGGTCATACCTCTGGCGCAAAATAAGTTTGATGTAGACAGCA
GAGCAGTACGAGGATTTTTGGGGCAACAGCAATTGGAGGATGCCCTCACG
GGCATGGACATTGTAATCATTCCCGCTGGTGTTCCTAGGAAACCTGGAAT
GACTAGGGATGATCTGTTCAATATCAATGCCGGAATTGTTAAGACCCTTT
GTGAAGGAATAGCTAAGTGCTGTCCAAAAGCTATTGTGAACTTGATTA
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