CX672024

Overview
NameCX672024
Unique NameCX672024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13690 contig Csv1_Contig13690:27..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.547e-87
Identity = 163/181 (90.06%), Postives = 169/181 (93.37%), Query Frame = -1
Query:  290 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 832
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKP  S T  EI YLTDRIQNGGTEVVEAK GAGSATLSMAYAA KFADACLRGLRGDAGVIECA+V+S VTELPFFASKVRLGR GIEE+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.803e-86
Identity = 159/181 (87.85%), Postives = 170/181 (93.92%), Query Frame = -1
Query:  290 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 832
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+V+VPVVGGHAGVTILPLLSQVKP  S T  EI+YLTDRIQNGGTEVVEAK GAGSATLSMAYAA KFADACLRGLRGDAGV+ECA+V+S VTELPFFA+KVRLGR GI+E+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.636e-84
Identity = 156/182 (85.71%), Postives = 167/182 (91.76%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAK GAGSATLSMAYAAAKFADACLRGLRGDA VIEC++VAS VTEL FFA+KVRLGR G EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 2.636e-84
Identity = 156/182 (85.71%), Postives = 167/182 (91.76%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAK GAGSATLSMAYAAAKFADACLRGLRGDA VIEC++VAS VTEL FFA+KVRLGR G EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 311.612 bits (797), Expect = 3.442e-84
Identity = 156/182 (85.71%), Postives = 167/182 (91.76%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FKK GTYDPKRLLGVT LDVVRANTFVAEVLGLDPR+V+VPV+GGHAGVTILPLLSQV P CS T  EI YLT RIQNGGTEVVEAK GAGSATLSMAYAA+KFADACLRGLRGDAG++EC++VAS VTELPFFASKVRLGR GIEEI SLGPLNE+ERAGLEKAKKELA SIQKGV+F+ K
Sbjct:  175 FKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 4.496e-84
Identity = 153/182 (84.07%), Postives = 165/182 (90.66%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FK+ GTYDPKRLLGVTMLDVVRANTFVAEVLG+DPR+VDVPVVGGHAG+TILPLLSQ+KP CS TP EI+YLT RIQNGG EVVEAK GAGSATLSMAYAA KFADACL  LRGDAG+IECAYVAS VTELPFFASKVRLGR G+EEI  LGPLN+YER  LEKAKKELA SI+KG+SF+RK
Sbjct:  172 FKRAGTYDPKRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFTPKEIEYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVTELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK 353          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 4.496e-84
Identity = 156/182 (85.71%), Postives = 165/182 (90.66%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP EI+YLT+RIQNGGTEVVEAK GAGSATLSMAYAAAKFADACLRGLRGDA V+EC++VAS VTEL FFA+KVRLGR G EE+Y LGPLNEYER GLEKAK ELAGSIQKGV F+RK
Sbjct:  173 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK 354          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.914e-83
Identity = 152/182 (83.52%), Postives = 166/182 (91.21%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FKK GT+DPK+L+GVTMLDVVRANTFVAEV+ LDPREV+VPVVGGHAGVTILPLLSQVKP CS T  EI+YLTDRIQNGGTEVVEAK GAGSATLSMAYAA +FADACLRGLRGDA ++ECAYVAS VTELPFFASKVRLGR GI+E+Y LGPLNEYER GLEKAKKEL+ SI KGV+F +K
Sbjct:  173 FKKAGTFDPKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.538e-59
Identity = 114/182 (62.64%), Postives = 137/182 (75.27%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FKK GTYD K+L GVT LDVVRA TF A    ++  EV+VPVVGGHAG+TILPL SQ  P  +L+   I  LT R Q+GGTEVVEAK G GSATLSMAYA A FADACL+GL G   V+EC++V ST+TELPFFASKVRLG+ G+EE+  LGPL+++E+ GLE  K EL  SI+KG+ F  +
Sbjct:  160 FKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKSSIEKGIKFANQ 341          
BLAST of CX672024 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.902e-58
Identity = 115/182 (63.19%), Postives = 135/182 (74.18%), Query Frame = -1
Query:  287 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 832
            FKK G YD K+L GVT LDVVRA TF A    +   EV+VPV+GGHAGVTILPL SQ  P  +L+   +  LT R Q+GGTEVVEAK G GSATLSMAYA A FADACL+GL G   VIEC+YV ST+TELPFFASKVRLG+ G+EE+  LGPL+++E+ GLE  K EL  SI+KGV F  +
Sbjct:  160 FKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKPELKSSIEKGVKFANQ 341          
The following BLAST results are available for this feature:
BLAST of CX672024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDHG_CITLA2.547e-8790.06Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA4.803e-8687.85Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG2_BRANA2.636e-8485.71Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA2.636e-8485.71Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG_ORYSJ3.442e-8485.71Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG_SOYBN4.496e-8484.07Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG1_ARATH4.496e-8485.71Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_ARATH2.914e-8383.52Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHM2_ARATH8.538e-5962.64Malate dehydrogenase 2, mitochondrial OS=Arabidops... [more]
MDHM1_ARATH1.902e-5863.19Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E06-I12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672024 ID=CX672024; Name=CX672024; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTTGAAGTATGAACTCTGATTTTGAATTGATTAAAATGATAAAACA
GGCGGCAGTTCGTCATCTACATATTCTTTATCCCTTCATTACAAGAATAT
CAAAAGAACCAAACCAACCCCACTAAGATGAATCTTTTGCTTCTTCTTTG
TAACTAACTTAATTCAATCTGATTATGGAAAAACGAAAACCCTACCTCTT
ATTCTGGGGAAAGTAATCTTGAGATATTTGAGGCAAACAACAAAAGCACA
ACCATTATCATTAGTCACCATGTGATTGGTTACTCATTTCCTGACAAAAC
TGACTCCCTTCTGAATGCTTCCCGCTAACTCTTTCTTTGCCTTCTCCAAA
CCAGCCCTCTCATACTCATTCAATGGGCCAAGTGAGTAAATTTCCTCAAT
TCCAGCACGGCCAAGCCGTACCTTGGATGCAAAGAAAGGGAGTTCAGTCA
CCGTAGAAGCCACGTATGCACACTCAATAACACCGGCATCCCCCCTCAAG
CCTCGGAGACAAGCATCGGCAAACTTGGCAGCAGCATATGCCATCGATAG
AGTGGCCGAACCAGCTCCAGTTTTTGCCTCAACTACTTCTGTACCACCAT
TCTGGATACGATCTGTCAAGTAGTCAATTTCTGTAGGGGTGAGAGAGCAT
GATGGTTTAACCTGAGATAAAAGAGGTAAAATAGTAACCCCTGCATGACC
TCCCACAACTGGAACATCAACTTCCCTGGGGTCAAGACCCAAGACCTCAG
CCACAAAAGTATTGGCTCGAACAACATCAAGCATTGTGACTCCCAAAAGT
CGCTTTGGATCATAAGTGCCAACTTTCTTGAA
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