CX672021

Overview
NameCX672021
Unique NameCX672021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5124 contig Csv1_Contig5124:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX672021 vs. ExPASy Swiss-Prot
Match: GRIP_ARATH (Protein GRIP OS=Arabidopsis thaliana GN=GRIP PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.366e-34
Identity = 75/133 (56.39%), Postives = 98/133 (73.68%), Query Frame = -2 
Query:    2 QIIHLEREFSSYKIRAHALLQKKDAELVAANDTEQLRXXXXXXXXXXXEMSLVSAEKDKALQELQEALANHDKELAERDAALNNANQQIKSIEIKLDSMNTKLQVEKEAWEKNLQTVEESWRLRCELLKAQKE 400
            +I  L+ EFSSYKIRAHALLQKKD EL AA D+EQ++           E+ LVSAE+D+A Q+LQ ALA+ +KEL ER  AL +A++QIKS+E+KLDS   + Q EK+AWE++L+ +EE+WR RCE L AQ E
Sbjct:  423 EINRLQSEFSSYKIRAHALLQKKDMELAAAKDSEQIKSLEEALKEAEKEVYLVSAERDRAQQDLQSALASLEKELEERAGALKDASEQIKSLEVKLDSTVARNQAEKQAWEEDLRVLEETWRRRCEALTAQNE 555
The following BLAST results are available for this feature:
BLAST of CX672021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GRIP_ARATH7.366e-3456.39Protein GRIP OS=Arabidopsis thaliana GN=GRIP PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_14E04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E04-I8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672021 ID=CX672021; Name=CX672021; organism=Citrus sinensis; type=EST; length=719bp
CTTCTTTTTGAGCTTTCAATAGCTCACATCTGAGTCGCCATGATTCTTCC
ACAGTTTGAAGGTTCTTTTCCCATGCTTCTTTCTCCACTTGGAGTTTAGT
ATTCATAGAATCAAGCTTGATCTCTATGCTCTTTATCTGCTGGTTTGCAT
TGTTCAGAGCTGCATCTCTTTCTGCAAGTTCTTTGTCATGATTAGCCAAA
GCCTCTTGAAGTTCTTGAAGGGCCTTATCTTTTTCTGCAGAAACCAGGGA
CATTTCTTTTTCAGTTTCTTTCAATGCTTCCTCAAGAGCTCTGAGCTGTT
CAGTGTCGTTCGCTGCAACTAGCTCTGCATCCTTTTTCTGGAGAAGTGCA
TGAGCACGAATCTTGTAAGAAGAAAATTCACGTTCAAGGTGGATGATCTG
CAAGGTAAACATTAGAAAAGGAATATAAGAGGGAAGGCATCAGATAAGGA
ATATTTGAACATCCAGAACTTTATATCAAAGATAAGTAATGTTGCAAATT
AAGGAAGCAGAATCAGTGTGTTCAGATGCGTAAGTGTCTGATGTTGATCC
CCTGCAAAGGAGACAGTGTATTGATTGAAGGGTGTAGGACTCCCACATGA
AATCTTTGTTAATGCCCTTTTGTGAACTGCAGAATCTGAAGGTCCATTAG
AGTTTCAAGGACCACCATAACAAATTGATTCATAACATATTTCTAAGAAA
ATGACAATAGGGCGAACTG
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