EY664610

Overview
NameEY664610
Unique NameEY664610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664610 vs. ExPASy Swiss-Prot
Match: Y5195_ARATH (UPF0717 protein At5g11950 OS=Arabidopsis thaliana GN=At5g11950 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.529e-51
Identity = 109/194 (56.19%), Postives = 125/194 (64.43%), Query Frame = 3
Query:  174 SNFKRVCVFCGSHSGNRRVFSDAALELGNELVRRKINLVYGGGSVGLMGLISQTVYAGGCHVLGIIPKALMPLEISGETVGEVRTVSDMHXXXXXXXXXXXXXXXLPGGYGTMEELLEMITWSQLGIHKIPGWSAKC*WLL*FLACII*QWC*RGFHQPKCSAEYYLSPIS*RTFGKNGAIHPCPEHCAPHETW 755
            S F+++CVFCGSHSG+R VFSDAA+ELGNELV+RKI+LVYGGGSVGLMGLIS+ VY GG HVLGIIPKALMP+EISGETVG+VR V+DMH               LPGGYGTMEELLEMITWSQLGIHK              L  +       GF +P        +P +     K     P   H A HE+W
Sbjct:    7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESW 200          

HSP 2 Score: 90.1225 bits (222), Expect = 1.954e-17
Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1
Query:  568 VGLLNVDGYYNSWLALFDNGVKEGFINPSARQNIISAPLAKELLEKMEQSTPAQNIVLPMKPGQWDHLGDLSKAQNRP 801
            VGLLNVDGYYN+ LALFD GV+EGFI P AR  ++SAP AKEL+EKME+ TP+   V   +  + + LGD    +N+P
Sbjct:  138 VGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEELGDYPGQENKP 215          
BLAST of EY664610 vs. ExPASy Swiss-Prot
Match: Y4923_PSEAE (UPF0717 protein PA4923 OS=Pseudomonas aeruginosa GN=PA4923 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 3.872e-27
Identity = 55/128 (42.97%), Postives = 72/128 (56.25%), Query Frame = 3
Query:  183 KRVCVFCGSHSGNRRVFSDAALELGNELVRRKINLVYGGGSVGLMGLISQTVYAGGCHVLGIIPKALMPLEISGETVGEVRTVSDMHXXXXXXXXXXXXXXXLPGGYGTMEELLEMITWSQLGIHKIP 566
            + VCVFCG+  G   V+ +AA+ LG  L  R + LVYGGG+VGLMG ++    A G  V+GIIP++L   EI  + +  +  V  MH               LPGG GT+EEL E+ TW QLG H  P
Sbjct:    4 RSVCVFCGASPGASPVYQEAAVALGRHLAERGLTLVYGGGAVGLMGTVADAALAAGGEVIGIIPQSLQEAEIGHKGLTRLEVVDGMHARKARMAELADAFIALPGGLGTLEELFEVWTWGQLGYHAKP 131          

HSP 2 Score: 33.113 bits (74), Expect = 3.872e-27
Identity = 17/54 (31.48%), Postives = 28/54 (51.85%), Query Frame = 1
Query:  565 PVGLLNVDGYYNSWLALFDNGVKEGFINPSARQNIISAPLAKELLEKMEQSTPA 726
            P+GLL V+G+Y+  L   D+ V E F+    R  +      + LL+ +   TP+
Sbjct:  131 PLGLLEVNGFYDPLLTFLDHLVDERFVRAEHRGMLQRGASPEALLDALAAWTPS 184          
BLAST of EY664610 vs. ExPASy Swiss-Prot
Match: YVDD_BACSU (UPF0717 protein yvdD OS=Bacillus subtilis GN=yvdD PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.194e-25
Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  183 KRVCVFCGSHSGNRRVFSDAALELGNELVRRKINLVYGGGSVGLMGLISQTVYAGGCHVLGIIPKALMPLEISGETVGEVRTVSDMHXXXXXXXXXXXXXXXLPGGYGTMEELLEMITWSQLGIHKIP 566
            K +CVF GS+ G    +   A ELG  +  + I LVYGG  VGLMG I+  +   G   +G++P  L   E+  + + E+  V+ MH               +PGG+GT EEL E++ W+Q+GIH+ P
Sbjct:    2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKP 129          

HSP 2 Score: 40.817 bits (94), Expect = 1.194e-25
Identity = 22/69 (31.88%), Postives = 36/69 (52.17%), Query Frame = 1
Query:  565 PVGLLNVDGYYNSWLALFDNGVKEGFINPSARQNIISAPLAKELLEKMEQSTPAQNIVLPMKPGQWDHL 771
            P+GL NV+GY+   + +    ++EGF N S  + I S+    EL+E+M      QN   P+   +W  +
Sbjct:  129 PIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQM------QNYSYPILEKKWTEI 191          
BLAST of EY664610 vs. ExPASy Swiss-Prot
Match: YJF5_YEAST (UPF0717 protein YJL055W OS=Saccharomyces cerevisiae GN=YJL055W PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.169e-22
Identity = 58/154 (37.66%), Postives = 74/154 (48.05%), Query Frame = 3
Query:  183 KRVCVFCGSHSGNRRVFSDAALELGNELVRRKINLVYGGGSVGLMGLISQTVYAGGC--HVLGIIPKALMPLEIS------------------------GETVGEVRTVSDMHXXXXXXXXXXXXXXXLPGGYGTMEELLEMITWSQLGIHKIP 566
            K VCV+CGS  G + ++S++A ELG    +    LVYGGG+ GLMG I+++         V GIIP AL+  E +                         E  GE   V DMH               +PGGYGT EE++E ITWSQLGIH  P
Sbjct:   19 KSVCVYCGSSFGAKALYSESAEELGALFHKLGWKLVYGGGTTGLMGKIARSTMGPDLSGQVHGIIPNALVSKERTDEDKEDVNKALLESVENHKGATPISEEYGETTIVPDMHTRKRMMANLSDAFVAMPGGYGTFEEIMECITWSQLGIHNKP 172          

HSP 2 Score: 33.8834 bits (76), Expect = 4.169e-22
Identity = 15/50 (30.00%), Postives = 30/50 (60.00%), Query Frame = 1
Query:  565 PVGLLNVDGYYNSWLALFDNGVKEGFINPSARQNIISAPLAKELLEKMEQ 714
            P+ L N+DG+Y+  L    + ++E FI+    + I  A   +E+++K+E+
Sbjct:  172 PIILFNIDGFYDKLLEFLKHSIQERFISVKNGEIIQVASTPQEVVDKIEK 221          
BLAST of EY664610 vs. ExPASy Swiss-Prot
Match: FAS6_RHOFA (UPF0717 protein ORF6 in fasciation locus OS=Rhodococcus fascians GN=fas6 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.482e-21
Identity = 48/129 (37.21%), Postives = 66/129 (51.16%), Query Frame = 3
Query:  183 KRVCVFCGSHSGNRRVFSDAALELGNELVRRKINLVYGGGSVGLMGLISQTVYAGGCHVLGIIPKALMPL-EISGETVGEVRTVSDMHXXXXXXXXXXXXXXXLPGGYGTMEELLEMITWSQLGIHKIP 566
            K V VFCG+  G    +   A  +G  + R K+ LVYGG  VGLMG ++      G  V+G+IP++   + E +   + E+  V DMH               LPGG GT EE  E++TWS LG+H  P
Sbjct:   20 KSVTVFCGAMPGRGTKYGQLAEGMGRAIARSKLRLVYGGARVGLMGTLANAALDSGGTVVGVIPESFTAIPEAAHHGLTELHVVHDMHQRKALMAELGDAFIALPGGVGTAEEFFEVLTWSHLGLHNKP 148          

HSP 2 Score: 31.5722 bits (70), Expect = 4.482e-21
Identity = 14/36 (38.89%), Postives = 20/36 (55.56%), Query Frame = 1
Query:  565 PVGLLNVDGYYNSWLALFDNGVKEGFINPSARQNII 672
            P  LLN + YY   L+  ++   EGFI P+ R  +I
Sbjct:  148 PCVLLNDNEYYRPLLSYIEHAAVEGFITPATRSRVI 183          
The following BLAST results are available for this feature:
BLAST of EY664610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
Y5195_ARATH3.529e-5156.19UPF0717 protein At5g11950 OS=Arabidopsis thaliana ... [more]
Y4923_PSEAE3.872e-2742.97UPF0717 protein PA4923 OS=Pseudomonas aeruginosa G... [more]
YVDD_BACSU1.194e-2536.72UPF0717 protein yvdD OS=Bacillus subtilis GN=yvdD ... [more]
YJF5_YEAST4.169e-2237.66UPF0717 protein YJL055W OS=Saccharomyces cerevisia... [more]
FAS6_RHOFA4.482e-2137.21UPF0717 protein ORF6 in fasciation locus OS=Rhodoc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664610 ID=EY664610; Name=EY664610; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGTTTTTTTTTTGGTTTTGTTTTATTATAACACCTTTCCAT
ATTCATTCTTTAAAAAATTTACTAAGAAACATTAATCTTGCACAAGTTGC
TTTCTTTCCAAATGATTAAATATTGATTGGCTTATATAGAGATTGTTGAA
TGGAGGAAGAAGGATACACCGGAAGCAATTTCAAAAGGGTGTGTGTGTTC
TGTGGAAGCCACTCTGGTAATAGAAGGGTCTTCAGTGATGCTGCTCTTGA
ACTGGGAAATGAGCTGGTGAGGAGAAAGATAAACTTGGTGTACGGTGGTG
GGAGCGTTGGGTTGATGGGTTTGATATCCCAGACAGTTTATGCTGGAGGT
TGCCATGTTCTCGGGATTATTCCAAAGGCTCTCATGCCACTTGAGATATC
TGGAGAAACTGTCGGCGAAGTAAGAACTGTTTCAGATATGCATGAGCGTA
AAGCTGCAATGGCTCGAGAAGCTGAAGCTTTTATTGCTCTTCCCGGAGGA
TATGGGACCATGGAAGAGCTATTGGAGATGATAACGTGGTCCCAACTCGG
AATCCATAAGATACCCGGTTGGTCTGCTAAATGTTGATGGCTACTATAAT
TCTTGGCTTGCATTATTTGACAATGGTGTTAAAGAGGGTTTCATCAACCC
AAGTGCTCGGCAGAATATTATCTCAGCCCCATTAGCTAAAGAACTTTTGG
AAAAAATGGAGCAATCCACCCCTGCCCAGAACATTGTGCTCCCCATGAAA
CCTGGGCAATGGGACCACCTTGGGGACCTTTCCAAGGCGCAAAACCGGCC
GGGAAATTTGGAGGGAGCTTTCCTGCTGTTTCGGCCTGGGACGGGATTAT
AATCATTTGAATTGGGAAAATATTTCATTAAAACGGGGCCCCTTTCTTAA
TTTCAAAATCTTTTGTAATGGTGGGGGTCGGAGTTCTTTGA
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