CX672009
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORT9 (tRNA-specific 2-thiouridylase mnmA OS=Borrelia turicatae (strain 91E135) GN=mnmA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.844e-24 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 271 ECPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANVVHSSADH 540 ECP +ED+ Y +AV + +VP E+ L DEY+K VV+Y IEE TP+PD+ CN RIKFG F D I+ +D + +GHYA + + + DH Sbjct: 46 ECPWKEDINYVEAVCKKFNVPYEIISLQDEYYKRVVTYAIEELKIGNTPSPDIFCNQRIKFGAFFDKINE-HYDLIVTGHYAKIENKN-DH 134 HSP 2 Score: 45.4394 bits (106), Expect = 2.844e-24 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVALRLLNAAGHSCI-AFYLKIWFQTSRTFGLNAHWKK 289 +++AVLLSGGVDSSVAL ++ G+ I +YLKIW + ++ WK+ Sbjct: 1 MQIAVLLSGGVDSSVALYIMIQKGYKNIKCYYLKIWLEDELSYIGECPWKE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORHD (tRNA-specific 2-thiouridylase mnmA OS=Borrelia hermsii (strain DAH) GN=mnmA PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.701e-24 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 271 ECPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANV 519 ECP EED+ Y +AV + +VP E+ L DEY+K VV+Y IEE TP+PD+ CN RIKFG F D I+ +D + +GHYA + Sbjct: 46 ECPWEEDINYVEAVCTKFNVPYEIISLQDEYYKRVVTYAIEELKIGNTPSPDIFCNQRIKFGAFFDKINE-HYDLIVTGHYAKI 128 HSP 2 Score: 44.2838 bits (103), Expect = 3.701e-24 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVALRLLNAAGHSCI-AFYLKIWFQTSRTFGLNAHWKK 289 +K+AVLLSGGVDSSVAL + G+ I +YLKIW + ++ W++ Sbjct: 1 MKIAVLLSGGVDSSVALYTMIQKGYKNIKCYYLKIWLEDELSYIGECPWEE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORBZ (tRNA-specific 2-thiouridylase mnmA OS=Borrelia burgdorferi (strain ZS7) GN=mnmA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.338e-23 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 274 CPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANV 519 CP +ED+ Y +A+ ++ +VP E+ + EY+ VVSY IEE TP+PD+ CN RIKFG F + I+S ++D V +GHYA + Sbjct: 47 CPWQEDLNYVEAICNKFNVPYEIINFQKEYYNKVVSYTIEELKNGNTPSPDIFCNQRIKFGAFFEKINS-QYDLVVTGHYAKI 128 HSP 2 Score: 47.7506 bits (112), Expect = 2.338e-23 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVAL-RLLNAAGHSCIAFYLKIWFQTSRTFGLNAHWKK 289 +K+AVLLSGGVDSSVAL R++N + +YLKIW + ++ N W++ Sbjct: 1 MKIAVLLSGGVDSSVALYRIINKGYSNIKCYYLKIWVEDELSYIGNCPWQE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORBU (tRNA-specific 2-thiouridylase mnmA OS=Borrelia burgdorferi GN=mnmA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.338e-23 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 274 CPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANV 519 CP +ED+ Y +A+ ++ +VP E+ + EY+ VVSY IEE TP+PD+ CN RIKFG F + I+S ++D V +GHYA + Sbjct: 47 CPWQEDLNYVEAICNKFNVPYEIINFQKEYYNKVVSYTIEELKNGNTPSPDIFCNQRIKFGAFFEKINS-QYDLVVTGHYAKI 128 HSP 2 Score: 47.7506 bits (112), Expect = 2.338e-23 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVAL-RLLNAAGHSCIAFYLKIWFQTSRTFGLNAHWKK 289 +K+AVLLSGGVDSSVAL R++N + +YLKIW + ++ N W++ Sbjct: 1 MKIAVLLSGGVDSSVALYRIINKGYSNIKCYYLKIWVEDELSYIGNCPWQE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORAP (tRNA-specific 2-thiouridylase mnmA OS=Borrelia afzelii (strain PKo) GN=mnmA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.252e-22 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 274 CPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANV 519 CP +ED+ Y +AV + +VP E+ + EY+ VVSY I+E TP+PD+ CN RIKFG F + I+ ++D V +GHYA + Sbjct: 47 CPWQEDLNYVEAVCSKFNVPYEIINFQKEYYNKVVSYTIKELKNGNTPSPDIFCNQRIKFGAFFEKINE-QYDLVVTGHYAKI 128 HSP 2 Score: 46.9802 bits (110), Expect = 3.252e-22 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVAL-RLLNAAGHSCIAFYLKIWFQTSRTFGLNAHWKK 289 +K+AVLLSGGVDSSVAL R++N S +YLKIW + ++ + W++ Sbjct: 1 MKIAVLLSGGVDSSVALYRIINKGYTSIKCYYLKIWLEDELSYIGSCPWQE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORDL (tRNA-specific 2-thiouridylase mnmA OS=Borrelia duttonii (strain Ly) GN=mnmA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.252e-22 Identity = 37/84 (44.05%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 271 ECPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANV 519 ECP +ED+ Y +V + +VP E+ +L +EY+ VV+Y IEE TP+PD+ CN RIKFG F + I+ ++D + +GHYA + Sbjct: 46 ECPWKEDITYVDSVCKKFNVPYEIINLQEEYYNRVVTYAIEELKMGNTPSPDIFCNQRIKFGAFFEKINE-KYDLIVTGHYAKI 128 HSP 2 Score: 45.4394 bits (106), Expect = 3.252e-22 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVALRLLNAAGHSCI-AFYLKIWFQTSRTFGLNAHWKK 289 +K+A+LLSGGVDSSVAL + G+ I +YLKIW + ++ WK+ Sbjct: 1 MKIAILLSGGVDSSVALYTMIQKGYKNIKCYYLKIWLEDELSYIGECPWKE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORRA (tRNA-specific 2-thiouridylase mnmA OS=Borrelia recurrentis (strain A1) GN=mnmA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.317e-22 Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 271 ECPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANV 519 ECP +ED+ Y +V + +VP ++ +L +EY+ VV+Y IEE TP+PD+ CN RIKFG F + I+ ++D + +GHYA + Sbjct: 46 ECPWKEDITYVDSVCKKFNVPYKIINLQEEYYNRVVTYAIEELKMGNTPSPDIFCNQRIKFGAFFEKINE-KYDLIVTGHYAKI 128 HSP 2 Score: 45.4394 bits (106), Expect = 9.317e-22 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVALRLLNAAGHSCI-AFYLKIWFQTSRTFGLNAHWKK 289 +K+A+LLSGGVDSSVAL + G+ I +YLKIW + ++ WK+ Sbjct: 1 MKIAILLSGGVDSSVALYTMIQKGYKNIKCYYLKIWLEDELSYIGECPWKE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_BORGA (tRNA-specific 2-thiouridylase mnmA OS=Borrelia garinii GN=mnmA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.212e-21 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 274 CPLEEDMKYAKAVYDQVDVPLEV-HLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANV 519 CP +ED+ Y +AV ++ ++P E+ + EY+ VV Y IEE TP+PD+ CN RIKFG F + I+ ++D V +GHYA + Sbjct: 47 CPWQEDLNYVEAVCNKFNIPYEIINFQKEYYNKVVIYTIEELKNGNTPSPDIFCNQRIKFGAFFEKINE-QYDLVVTGHYARI 128 HSP 2 Score: 45.8246 bits (107), Expect = 1.212e-21 Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 2 Query: 140 LKVAVLLSGGVDSSVAL-RLLNAAGHSCIAFYLKIWFQTSRTFGLNAHWKK 289 +K+AVLLSGGVDSS+AL +++N + +YLKIW + ++ N W++ Sbjct: 1 MKIAVLLSGGVDSSIALYKVINKGYTNIKCYYLKIWLEDELSYIGNCPWQE 51
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_STRTD (tRNA-specific 2-thiouridylase mnmA OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=mnmA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.665e-21 Identity = 42/84 (50.00%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 274 CPLEEDMKYAKAVYDQVDVPL-EVHLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANVV 522 C ED K AV DQ+D+P V+ EYW V Y + EY RTPNPDV+CN IKF F+D ++ DYVA+GHYA VV Sbjct: 50 CTATEDYKDVAAVADQIDIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMTLGADYVATGHYAQVV 133 HSP 2 Score: 35.4242 bits (80), Expect = 2.665e-21 Identity = 19/43 (44.19%), Postives = 25/43 (58.14%), Query Frame = 2 Query: 143 KVAVLLSGGVDSSVALRLLNAAGHSCIAFYLKIWFQTSRTFGL 271 +V V +SGGVDSSV LL G+ I ++K W T FG+ Sbjct: 8 RVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDE-FGV 49
BLAST of CX672009 vs. ExPASy Swiss-Prot
Match: MNMA_STRT2 (tRNA-specific 2-thiouridylase mnmA OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=mnmA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.665e-21 Identity = 42/84 (50.00%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 274 CPLEEDMKYAKAVYDQVDVPL-EVHLTDEYWKNVVSYIIEEY*CDRTPNPDVLCNTRIKFGVFMDAISSMEFDYVASGHYANVV 522 C ED K AV DQ+D+P V+ EYW V Y + EY RTPNPDV+CN IKF F+D ++ DYVA+GHYA VV Sbjct: 50 CTATEDYKDVAAVADQIDIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMTLGADYVATGHYAQVV 133 HSP 2 Score: 35.4242 bits (80), Expect = 2.665e-21 Identity = 19/43 (44.19%), Postives = 25/43 (58.14%), Query Frame = 2 Query: 143 KVAVLLSGGVDSSVALRLLNAAGHSCIAFYLKIWFQTSRTFGL 271 +V V +SGGVDSSV LL G+ I ++K W T FG+ Sbjct: 8 RVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDE-FGV 49 The following BLAST results are available for this feature:
BLAST of CX672009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 471
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672009 ID=CX672009; Name=CX672009; organism=Citrus sinensis; type=EST; length=833bpback to top |