CX671971

Overview
NameCX671971
Unique NameCX671971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671971_ssr40 microsatellite CX671971_ssr40:40..53. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10886 contig Csv1_Contig10886:13..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 4.309e-100
Identity = 174/231 (75.32%), Postives = 193/231 (83.55%), Query Frame = 2
Query:  128 LISASDDA--TILYESFDESFEGRWIVSQKDEYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            L+ ASDDA   I YESFDE F+GRWIVS K++Y GVWK +KS+GH+DYGLLV E A+KYAIVKEL E +SLKDGTVVLQ+E RLQNGLECGGAY+KYLRPQE+GW  KEFDNESPY IMFGPDKCGATNKVHFI KHKNPKSGEY+EHHLK PPSVPSDKLTHVYTAILKPDNEL+ILIDGEEK+KANFL+++DF+PPLI                  RAKIPDP AVKPD
Sbjct:   28 LVRASDDADDAIFYESFDEDFDGRWIVSDKEDYNGVWKHAKSDGHDDYGLLVSEQARKYAIVKELAESVSLKDGTVVLQFETRLQNGLECGGAYIKYLRPQESGWKPKEFDNESPYSIMFGPDKCGATNKVHFIFKHKNPKSGEYVEHHLKYPPSVPSDKLTHVYTAILKPDNELQILIDGEEKKKANFLSSEDFEPPLIPSKTIPDPDDKKPEDWDERAKIPDPSAVKPD 258          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 3.088e-98
Identity = 170/228 (74.56%), Postives = 192/228 (84.21%), Query Frame = 2
Query:  131 ISASDDATILYESFDESFEGRWIVSQKDEYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            I AS DA I YESFDESFEG WIVS+K++Y G WK SKSEGH+DYGLLV + A+KYAIVKEL++P+ LKDGT+VLQYEVRLQNGLECGGAYLKYLRPQ+AGW +K FDNESPY IMFGPDKCGATNKVHFILKHKNPKSG+Y+EHHLK PPSVPSDKLTHVYTA++KPDNEL ILIDGEEK+KANFL+++DF+P LI                  RAKIPDP+A KPD
Sbjct:   27 ICASSDA-IFYESFDESFEGSWIVSEKEDYPGEWKHSKSEGHDDYGLLVSDKARKYAIVKELEKPVELKDGTIVLQYEVRLQNGLECGGAYLKYLRPQDAGWTAKGFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGDYVEHHLKFPPSVPSDKLTHVYTAVIKPDNELVILIDGEEKKKANFLSSEDFEPALIPTKTIPDPDDKKPEDWDERAKIPDPEATKPD 253          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 9.935e-97
Identity = 166/230 (72.17%), Postives = 188/230 (81.74%), Query Frame = 2
Query:  125 QLISASDDATILYESFDESFEGRWIVSQKDEYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            Q +   DD T+LYESFDE F+GRWIVS+  +Y+GVWK +KSEGHEDYGLLV E A+KY IVKELDEPL+LK+GTVVLQYEVR Q GLECGGAYLKYLRPQEAGW  + FD+ESPY IMFGPDKCG TNKVHFILKHKNPKSGEY+EHHLK PPSVP DKL+HVYTAILKPDNE+RIL+DGEEK+KAN L+ +DF+P LI                  RAKIPDP+AVKP+
Sbjct:   20 QKLCYCDDQTVLYESFDEPFDGRWIVSKNSDYEGVWKHAKSEGHEDYGLLVSEKARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCGGTNKVHFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPE 249          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 349.362 bits (895), Expect = 1.435e-95
Identity = 166/230 (72.17%), Postives = 187/230 (81.30%), Query Frame = 2
Query:  131 ISASDDATILYESFDESFEGRWIVSQKDEYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELD--EPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            +S  DD TILYESFDE F+GRW+VS+K EY+GVWK  KSEGH+DYGLLV E AKKY IVKELD  EPL+L +GTVVLQYE R Q GLECGGAYLKYLRPQEAGWV + FDN+SPY IMFGPDKCGATNKVHFILKHKNPKSGE++EHHLK PPSVP D L+HVYTA+LK DNE+RIL+DGEEK+K N L+A+DF+PPLI                  RAKIPDP+AVKPD
Sbjct:   22 VSYCDDQTILYESFDEPFDGRWVVSEKAEYQGVWKHEKSEGHDDYGLLVSEKAKKYGIVKELDVDEPLNLNEGTVVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCGATNKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKPD 251          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.939e-92
Identity = 161/231 (69.70%), Postives = 188/231 (81.39%), Query Frame = 2
Query:  128 LISASD--DATILYESFDESFEGRWIVSQKDEYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            L+ ASD  D  I YESFDE F+ RWIVS K+EY GVWK SKSEGH+D+GLLV EPA+KYAIVKELD P+SLKDGTVVLQ+E RLQNGLECGGAY+KYL+ QE+GW  K FDNES Y IMFGPD+CGATNKVHFI +HKNPK+G+++EHHLK PPSVPSDKL+HVYTA+LK DNE+ ILIDGEEK+KANFL+++DF+P LI                  RAKIPDP+AVKP+
Sbjct:   29 LVRASDEVDDAIFYESFDEDFDNRWIVSGKEEYNGVWKHSKSEGHDDFGLLVSEPARKYAIVKELDAPVSLKDGTVVLQFETRLQNGLECGGAYIKYLQTQESGWKPKGFDNESGYSIMFGPDRCGATNKVHFIFRHKNPKTGKHVEHHLKFPPSVPSDKLSHVYTAVLKDDNEVSILIDGEEKKKANFLSSEDFEPALIPSKTIPDPDDKKPEDWDERAKIPDPEAVKPE 259          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.193e-41
Identity = 93/214 (43.46%), Postives = 124/214 (57.94%), Query Frame = 2
Query:  173 DESFEGRWIVSQKDEYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            D ++ G W V +     G+          D GL+V   A  +AI  +  + +  K  T+V+QYEV+ QN L CGGAY+K L+  +    ++EF N +PY+IMFGPDKCGATNKVHFI +HKNPK+GEY E H+  PP+  + KLT +YT I+KPD   +ILIDGE  +    L  +DF PP+                    AKIPDP+A KPD
Sbjct:   77 DWAYVGEWAVEEPTVLNGMVG--------DKGLVVKNVAAHHAISAKFPKKIDNKGKTLVVQYEVKPQNSLVCGGAYMKLLQENKK-LHAEEFSNATPYVIMFGPDKCGATNKVHFIFRHKNPKTGEYEEKHMTAPPAARTTKLTTLYTLIVKPDQSFQILIDGEAVKNGTLL--EDFAPPVNPEKEIDDPKDKKPADWVDEAKIPDPEAKKPD 279          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_CANFA (Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 1.045e-37
Identity = 96/235 (40.85%), Postives = 126/235 (53.62%), Query Frame = 2
Query:  164 ESFDESFEGRWIVSQ--KDE-------YKGVW-----KRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNP----PSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            +SFD      WI+S+  KD+       Y G W     K +K  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L       +  +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P     +  +DK TH+YT IL PDN   IL+D       N L  +D  PP+                   R KIPDPDAVKPD
Sbjct:   74 DSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLD-QFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSIVNSGNLL--NDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAVKPD 303          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_PONAB (Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.365e-37
Identity = 96/235 (40.85%), Postives = 126/235 (53.62%), Query Frame = 2
Query:  164 ESFDESFEGRWIVSQ--KDE-------YKGVW-----KRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNP----PSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            +SFD      WI+S+  KD+       Y G W     K SK  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L       +  +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P     +  +DK TH+YT IL PDN   IL+D       N L  +D  PP+                   R KIPDP+AVKPD
Sbjct:   73 DSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKESKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLD-QFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPD 302          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_MOUSE (Calnexin OS=Mus musculus GN=Canx PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.365e-37
Identity = 96/235 (40.85%), Postives = 126/235 (53.62%), Query Frame = 2
Query:  164 ESFDESFEGRWIVSQ--KDE-------YKGVW-----KRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNP----PSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            +SFD      WI+S+  KD+       Y G W     K +K  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L  + A     +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P     +  +DK TH+YT IL PDN   IL+D       N L  +D  PP+                   R KI DPDAVKPD
Sbjct:   74 DSFDRGSLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLS-KTAELSLDQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPD 303          
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_HUMAN (Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.365e-37
Identity = 96/235 (40.85%), Postives = 126/235 (53.62%), Query Frame = 2
Query:  164 ESFDESFEGRWIVSQ--KDE-------YKGVW-----KRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNKVHFILKHKNPKSGEYIEHHLKNP----PSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814
            +SFD      WI+S+  KD+       Y G W     K SK  G  D GL++   AK +AI  +L++P       +++QYEV  QNG+ECGGAY+K L       +  +F +++PY IMFGPDKCG   K+HFI +HKNPK+G Y E H K P     +  +DK TH+YT IL PDN   IL+D       N L  +D  PP+                   R KIPDP+AVKPD
Sbjct:   73 DSFDRGTLSGWILSKAKKDDTDDEIAKYDGKWEVEEMKESKLPG--DKGLVLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLD-QFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGIYEEKHAKRPDADLKTYFTDKKTHLYTLILNPDNSFEILVDQSVVNSGNLL--NDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPD 302          
The following BLAST results are available for this feature:
BLAST of CX671971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CALX_SOYBN4.309e-10075.32Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX_HELTU3.088e-9874.56Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
CALX1_ARATH9.935e-9772.17Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX2_ARATH1.435e-9572.17Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_PEA1.939e-9269.70Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX_ASPFU1.193e-4143.46Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
CALX_CANFA1.045e-3740.85Calnexin OS=Canis familiaris GN=CANX PE=1 SV=3[more]
CALX_PONAB1.365e-3740.85Calnexin OS=Pongo abelii GN=CANX PE=2 SV=2[more]
CALX_MOUSE1.365e-3740.85Calnexin OS=Mus musculus GN=Canx PE=1 SV=1[more]
CALX_HUMAN1.365e-3740.85Calnexin OS=Homo sapiens GN=CANX PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C01-E2-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671971 ID=CX671971; Name=CX671971; organism=Citrus sinensis; type=EST; length=814bp
GATTGATTTTAAGATTTAGATTCAGATCGCGGTCTCGGACTCTCTCTCTC
TCTCACACATGGTGCAGAGAATGGCTGTCTCTCTGCGGTTCGCTCTCCTG
CTTTTCGCTGCTTTCGTTTCATTTCAATTGATCTCCGCTTCTGATGATGC
CACGATCTTGTACGAGTCGTTTGACGAGTCATTCGAAGGACGATGGATCG
TTTCTCAGAAAGATGAATACAAAGGTGTATGGAAGCGCTCAAAGAGTGAG
GGTCATGAAGATTATGGCCTTCTTGTTGGTGAGCCAGCAAAGAAGTACGC
GATAGTGAAGGAGCTTGATGAGCCCCTGAGTTTGAAGGATGGAACTGTTG
TCCTCCAGTATGAGGTTCGCCTCCAGAATGGTCTTGAATGTGGTGGTGCA
TATCTGAAATACCTGCGGCCTCAGGAGGCAGGTTGGGTATCCAAGGAGTT
CGACAACGAATCTCCGTATATGATTATGTTTGGACCTGATAAATGTGGTG
CCACAAACAAGGTGCACTTCATCTTAAAGCATAAGAATCCCAAGAGTGGA
GAGTACATTGAACACCATCTCAAGAACCCACCTTCTGTGCCCTCTGATAA
ACTGACTCATGTATACACTGCCATCTTGAAACCTGATAATGAGTTGAGAA
TTTTAATTGATGGAGAGGAGAAGCAGAAGGCAAATTTCCTCGCTGCTGAT
GATTTTCAGCCACCGCTCATTCCTGAGAAGACAATTCCTGATCCAGATGA
CAAGAAGCCTGAGGATTGGGATGAGAGGGCAAAGATTCCTGACCCTGATG
CAGTAAAACCTGAC
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