CX671968

Overview
NameCX671968
Unique NameCX671968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_PINTA (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.460e-51
Identity = 105/120 (87.50%), Postives = 112/120 (93.33%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQDDE-EVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRVT+KKSKNILFVIS PDVFKSPT+DTY+ FGEAKIEDLSSQLQTQAAEQFKAP+LSHV  KPESS  AQ+DE EVD+TGVEPKDIELVMTQAGVSR KAVKALKAADGDIVSAIM+LT
Sbjct:   85 SRVTIKKSKNILFVISNPDVFKSPTSDTYIAFGEAKIEDLSSQLQTQAAEQFKAPNLSHVTMKPESSTAAQEDEDEVDDTGVEPKDIELVMTQAGVSRTKAVKALKAADGDIVSAIMDLT 204          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA1_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana GN=At3g12390 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.935e-51
Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESS--AMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRVTVKKSKNILFVISKPDVFKSP +DTYVIFGEAKIEDLSSQ+Q+QAAEQFKAPDLS+V+SK ESS  A+ QDDEEVDE GVEPKDIELVMTQAGVSR  AVKALKAADGDIVSAIMELT
Sbjct:   82 SRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQIQSQAAEQFKAPDLSNVISKGESSSAAVVQDDEEVDEEGVEPKDIELVMTQAGVSRPNAVKALKAADGDIVSAIMELT 202          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA3_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana GN=At5g13850 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.102e-47
Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA-------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRVTVKKSKNILFVISKPDVFKSP +DTYVIFGEAKIEDLSSQLQ+QAAEQFKAP+LS+V+S+ E+S+ A        DDEEVDE GVEPKDIELVMTQAGVS+ +AVKALK A+GDIVSAIMELT
Sbjct:   78 SRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKAPNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQAGVSKPRAVKALKLANGDIVSAIMELT 203          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA4_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana GN=At4g10480 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.101e-41
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRVT+K+SKN+LFVISKPDVFKSP ++TYVIFGEAKI+D+SSQLQ QAA++FK PD++ ++   + S  A      +DDE+VDETGVE KDI+LVMTQAGVSR KAVKALK ++GDIVSAIMELT
Sbjct:   87 SRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEAKDIDLVMTQAGVSRPKAVKALKESNGDIVSAIMELT 211          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA2_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana GN=At3g49470 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.203e-41
Identity = 86/125 (68.80%), Postives = 106/125 (84.80%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSA------MAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRVT+K++KN+LF ISKPDVFKSP ++TYVIFGEAKIEDLSSQLQTQAA+QF+ P++     + E+S       + +D+EE+DETGVE +DI+LVMTQAGVSR+KAVKALK+ DGDIVSAIMELT
Sbjct:   92 SRVTIKRTKNVLFFISKPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEEIDETGVEARDIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELT 216          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA5_ARATH (Nascent polypeptide-associated complex subunit alpha-like protein 5 OS=Arabidopsis thaliana GN=At1g33040 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 7.890e-40
Identity = 83/125 (66.40%), Postives = 105/125 (84.00%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAM------AQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            SRVT+K++KN+LFVISKPDV+KSP  +TYVIFGEAK++DLSSQLQTQAA++FK PD++ ++    S A        +D+++VD+TGVE +DI+LVMTQAGVS+AKAV ALKA DGDIVSAIMELT
Sbjct:   84 SRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQAAQRFKMPDVTSMLPNAGSEATMAPLAEEEDEDDVDDTGVEARDIDLVMTQAGVSKAKAVSALKANDGDIVSAIMELT 208          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_ORENI (Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.627e-35
Identity = 79/123 (64.23%), Postives = 100/123 (81.30%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP--DLSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK P   +S+V    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK  + DIV+AIMELT
Sbjct:   92 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVPGETVSNVQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACAD_MOUSE (NAC-alpha domain-containing protein 1 OS=Mus musculus GN=Nacad PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.304e-34
Identity = 76/128 (59.38%), Postives = 95/128 (74.22%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVV---------SKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +R+T++KSKNILFVI+KPDVFKSP +DTYV+FGEAKIEDLS Q+   AAE+FK P     +          +PE     ++DEEV+E G+EP+DIELVM QA V+RAKAV+ALK    DIV+AIMELT
Sbjct: 1376 TRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSALVPELSPGPRVRPECEEQEEEDEEVEEAGLEPRDIELVMAQANVTRAKAVRALKDNHSDIVNAIMELT 1503          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_DANRE (Nascent polypeptide-associated complex subunit alpha OS=Danio rerio GN=naca PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.904e-34
Identity = 77/123 (62.60%), Postives = 99/123 (80.49%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK  + DIV+AIMELT
Sbjct:   92 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNNNDIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_XENTR (Nascent polypeptide-associated complex subunit alpha OS=Xenopus tropicalis GN=naca PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.793e-34
Identity = 77/123 (62.60%), Postives = 98/123 (79.67%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct:   91 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 213          
The following BLAST results are available for this feature:
BLAST of CX671968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_PINTA4.460e-5187.50Nascent polypeptide-associated complex subunit alp... [more]
NACA1_ARATH9.935e-5188.43Nascent polypeptide-associated complex subunit alp... [more]
NACA3_ARATH5.102e-4780.16Nascent polypeptide-associated complex subunit alp... [more]
NACA4_ARATH1.101e-4169.60Nascent polypeptide-associated complex subunit alp... [more]
NACA2_ARATH3.203e-4168.80Nascent polypeptide-associated complex subunit alp... [more]
NACA5_ARATH7.890e-4066.40Nascent polypeptide-associated complex subunit alp... [more]
NACA_ORENI2.627e-3564.23Nascent polypeptide-associated complex subunit alp... [more]
NACAD_MOUSE1.304e-3459.38NAC-alpha domain-containing protein 1 OS=Mus muscu... [more]
NACA_DANRE2.904e-3462.60Nascent polypeptide-associated complex subunit alp... [more]
NACA_XENTR3.793e-3462.60Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B11-C22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671968 ID=CX671968; Name=CX671968; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTACGAGAGTGCAAATATTATTTTCCCTTTATATT
ATTTTCCCTTTTCTTTTCCTTGTTTAATGTCGAATCGTTTACAAGGAGAG
AAATGGGATCAACCACTGAAATTTTTGTAACCATAATTGTAAATCATTTT
AGCAAGAATCCTTCAGTCGACCATTCAGAAAAGCCTGGTCTTGATACAAA
GGAACTTAGTCAGGAACCAGTCACATATGAAAGAAAAACAAGTAAATTGC
CCAGCCAAAGCAAAAGGAATCACAAACAGTTCCATTTCACAATCAACAGC
TTTGCAGATTCTCTCCTCTTCAATTCCCACAGACAATATTGGGTATTTGG
TAATAAAGAATACTGTGGCGTGAAATGTTTTCTTGTGAGCAGCACACAAA
CATCTAAGAAAACTCTCAGTTGGTAAGCTCCATGATAGCTGAAACTATGT
CCCCATCTGCAGCCTTCAGCGCTTTCACAGCCTTTGCCCTGGAGACTCCT
GCCTGTGTCATTACTAACTCTATGTCCTTAGGCTCAACCCCGGTCTCATC
TACTTCTTCATCGTCCTGAGCCATGGCTGATGACTCAGGTTTGGAGACCA
CGTGGCTGAGATCAGGAGCCTTAAATTGCTCTGCTGCCTGAGTCTGCAAT
TGTGAGCTCAAGTCCTCGATCTTTGCCTCACCAAAGATTACATATGTATC
TGTTGTCGGGCTCTTGAAAACATCCGGTTTTGAGATAACAAACAAGATAT
TCTTGCTCTTTTTGACGGTAACCCGGCT
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