CX671876

Overview
NameCX671876
Unique NameCX671876
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_MESCR (Pyruvate, phosphate dikinase, chloroplastic OS=Mesembryanthemum crystallinum GN=PPD PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 3.146e-86
Identity = 169/210 (80.48%), Postives = 173/210 (82.38%), Query Frame = -1
Query:  129 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQV 758
            AVSMS    KVFPEIMVPLVGTPQELGHQ+SLIRNVA KVFSE GSSL YKVGTMIEIPRAALVADEIA EAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFE                             VLDQKGVGQLIK+ATE+GR+ARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQV
Sbjct:  768 AVSMSNQGVKVFPEIMVPLVGTPQELGHQVSLIRNVAEKVFSETGSSLSYKVGTMIEIPRAALVADEIAMEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFE-----------------------------VLDQKGVGQLIKLATEKGRSARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQV 948          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK1_ARATH (Pyruvate, phosphate dikinase 1, chloroplastic OS=Arabidopsis thaliana GN=PPDK PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.280e-79
Identity = 154/212 (72.64%), Postives = 166/212 (78.30%), Query Frame = -1
Query:  123 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 758
            A SM      V PEIMVPLVGTPQELGHQ+ +IR VA KVF+E G ++ YKVGTMIEIPRAAL+ADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLP+YL+KGILQ DPFEV                             LDQ+GVGQLIK+ATE+GRAARPSLKVGICGEHGG+PSSV FFAEAGLDYVSCSPFRVPIARLAAAQV V
Sbjct:  780 AASMQDQGVTVIPEIMVPLVGTPQELGHQVDVIRKVAKKVFAEKGHTVSYKVGTMIEIPRAALIADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLAKGILQHDPFEV-----------------------------LDQQGVGQLIKMATEKGRAARPSLKVGICGEHGGDPSSVGFFAEAGLDYVSCSPFRVPIARLAAAQVVV 962          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK1_ORYSJ (Pyruvate, phosphate dikinase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPDK1 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.354e-79
Identity = 148/210 (70.48%), Postives = 169/210 (80.48%), Query Frame = -1
Query:  129 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQV 758
            A++M+    +VFPEIMVPLVGTPQELGHQ+ +IR +A KVF++MG ++ YKVGTMIEIPRAALVADEIA++AEFFSFGTNDLTQMTFGYSRDDVGKFLP+YLS+GILQ DPFEV                             LDQ+GVG+L+K+ATERGR ARP+LKVGICGEHGGEP SVAFFA+AGLDYVSCSPFRVPIARLAAAQV
Sbjct:  765 AITMTNQGIQVFPEIMVPLVGTPQELGHQVDVIRQIANKVFTDMGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSQGILQHDPFEV-----------------------------LDQRGVGELVKLATERGRKARPNLKVGICGEHGGEPLSVAFFAKAGLDYVSCSPFRVPIARLAAAQV 945          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_FLABR (Pyruvate, phosphate dikinase, chloroplastic OS=Flaveria brownii GN=PPDK PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.849e-78
Identity = 154/212 (72.64%), Postives = 165/212 (77.83%), Query Frame = -1
Query:  123 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 758
            AVSM+     V PEIMVPLVGTPQEL HQI +IR VA  VF+EMG +L+YKVGTMIEIPRAAL+ADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLP+YLS+GILQ DPFEV                             LDQKGVGQLIK+ATE+GRAA P+LKVGICGEHGGEPSSVAFF   GLDYVSCSPFRVPIARLAAAQV V
Sbjct:  773 AVSMNNQGVTVIPEIMVPLVGTPQELRHQIGVIRGVAANVFAEMGLTLEYKVGTMIEIPRAALIADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSQGILQHDPFEV-----------------------------LDQKGVGQLIKMATEKGRAANPNLKVGICGEHGGEPSSVAFFDGVGLDYVSCSPFRVPIARLAAAQVVV 955          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK1_MAIZE (Pyruvate, phosphate dikinase 1, chloroplastic OS=Zea mays GN=PPDK1 PE=1 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 7.025e-78
Identity = 148/212 (69.81%), Postives = 170/212 (80.19%), Query Frame = -1
Query:  123 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 758
            A++M+    +VFPEIMVPLVGTPQELGHQ++LIR VA KVF+ +G ++ YKVGTMIEIPRAALVADEIA++AEFFSFGTNDLTQMTFGYSRDDVGKF+PV+L++GILQ DPFEV                             LDQ+GVG+L+K ATERGR ARP+LKVGICGEHGGEPSSVAFFA+AGLD+VSCSPFRVPIARLAAAQV V
Sbjct:  765 AIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVHLAQGILQHDPFEV-----------------------------LDQRGVGELVKFATERGRKARPNLKVGICGEHGGEPSSVAFFAKAGLDFVSCSPFRVPIARLAAAQVLV 947          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_FLAPR (Pyruvate, phosphate dikinase, chloroplastic OS=Flaveria pringlei GN=PPDK PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.670e-77
Identity = 152/212 (71.70%), Postives = 164/212 (77.36%), Query Frame = -1
Query:  123 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 758
            AVSM+     V PEIMVPLVGTPQEL HQI +IR VA  VF+EMG ++DYKVGTMIEIPRAAL+A+EIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFL +YLS+GILQ DPFEV                             LDQKGVGQLIK+ATE+GRAA P+LKVGICGEHGGEPSSVAFF   GLDYVSCSPFRVPIARLAAAQV V
Sbjct:  774 AVSMNNQGVTVIPEIMVPLVGTPQELRHQIGVIRGVAANVFAEMGLTMDYKVGTMIEIPRAALIAEEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLQIYLSQGILQHDPFEV-----------------------------LDQKGVGQLIKMATEKGRAANPNLKVGICGEHGGEPSSVAFFDGVGLDYVSCSPFRVPIARLAAAQVVV 956          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_FLATR (Pyruvate, phosphate dikinase, chloroplastic OS=Flaveria trinervia GN=PPDK PE=2 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.260e-76
Identity = 150/212 (70.75%), Postives = 164/212 (77.36%), Query Frame = -1
Query:  123 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 758
            AVSM+     V PEIMVPLVGTPQEL HQIS+IR VA  VF+EMG +L+YKVGTMIEIPRAAL+A+EI KEA+FFSFGTNDLTQMTFGYSRDDVGKFL +YL++GILQ DPFEV                             +DQKGVGQLIK+ATE+GRAA PSLKVGICGEHGGEPSSVAFF   GLDYVSCSPFRVPIARLAAAQV V
Sbjct:  771 AVSMTNQGVTVIPEIMVPLVGTPQELRHQISVIRGVAANVFAEMGVTLEYKVGTMIEIPRAALIAEEIGKEADFFSFGTNDLTQMTFGYSRDDVGKFLQIYLAQGILQHDPFEV-----------------------------IDQKGVGQLIKMATEKGRAANPSLKVGICGEHGGEPSSVAFFDGVGLDYVSCSPFRVPIARLAAAQVIV 953          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_FLABI (Pyruvate, phosphate dikinase, chloroplastic OS=Flaveria bidentis PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.035e-76
Identity = 149/212 (70.28%), Postives = 164/212 (77.36%), Query Frame = -1
Query:  123 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 758
            AVSM+     V PEIMVPLVGTPQEL HQIS+IR VA  VF+EMG +L+YKVGTMIEIPRAAL+A+EI KEA+FFSFGTNDLTQMTFGYSRDDVGKFL +YL++GILQ DPFEV                             +DQKGVGQLIK+ATE+GRAA P+LKVGICGEHGGEPSSVAFF   GLDYVSCSPFRVPIARLAAAQV V
Sbjct:  771 AVSMTNQGVTVIPEIMVPLVGTPQELRHQISVIRGVAANVFAEMGVTLEYKVGTMIEIPRAALIAEEIGKEADFFSFGTNDLTQMTFGYSRDDVGKFLQIYLAQGILQHDPFEV-----------------------------IDQKGVGQLIKMATEKGRAANPNLKVGICGEHGGEPSSVAFFDGVGLDYVSCSPFRVPIARLAAAQVIV 953          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK2_ORYSJ (Pyruvate, phosphate dikinase 2 OS=Oryza sativa subsp. japonica GN=PPDK2 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.791e-73
Identity = 140/210 (66.67%), Postives = 161/210 (76.67%), Query Frame = -1
Query:  129 AVSMSTHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQV 758
            A+SM+    KVFPEIMVPL+GTPQEL  Q+ +IR VA KVF+   +++ YK+G+MIE+PRAAL+ADEIA  AEFFSFGTNDLTQMTFGYSRDDVGKFLP YLSKGILQ+DPFEV+                             DQKGVG+L+K+A ERGR ARP L+VGICGEHGGEPSSVAFFA+ GL+YVSCSPFRVPIARLAAAQV
Sbjct:  705 AISMTEQGVKVFPEIMVPLIGTPQELAQQVDVIREVAEKVFANAETTISYKIGSMIEVPRAALIADEIAALAEFFSFGTNDLTQMTFGYSRDDVGKFLPTYLSKGILQNDPFEVF-----------------------------DQKGVGELVKVAVERGRKARPDLEVGICGEHGGEPSSVAFFAKVGLNYVSCSPFRVPIARLAAAQV 885          
BLAST of CX671876 vs. ExPASy Swiss-Prot
Match: PPDK_CLOSY (Pyruvate, phosphate dikinase OS=Clostridium symbiosum GN=ppdK PE=1 SV=5)

HSP 1 Score: 211.846 bits (538), Expect = 3.176e-54
Identity = 113/202 (55.94%), Postives = 133/202 (65.84%), Query Frame = -1
Query:  123 VFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVWHTPLKLKVK*RKKCSIPRIVT*SNCLQVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 728
            + PEIM+PLVG  +EL     ++  VA +V  E GS + Y +GTMIEIPRAAL AD IA+EAEFFSFGTNDLTQMTFG+SRDD GKFL  Y    I +SDPF                               LDQ GVGQL+++A ++GR  RP LK GICGEHGG+PSSV F  + GL+YVSCSPFRVPIARLAAAQ A+
Sbjct:  699 IVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPF-----------------------------ARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAAL 871          
The following BLAST results are available for this feature:
BLAST of CX671876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PPDK_MESCR3.146e-8680.48Pyruvate, phosphate dikinase, chloroplastic OS=Mes... [more]
PPDK1_ARATH1.280e-7972.64Pyruvate, phosphate dikinase 1, chloroplastic OS=A... [more]
PPDK1_ORYSJ6.354e-7970.48Pyruvate, phosphate dikinase 1, chloroplastic OS=O... [more]
PPDK_FLABR1.849e-7872.64Pyruvate, phosphate dikinase, chloroplastic OS=Fla... [more]
PPDK1_MAIZE7.025e-7869.81Pyruvate, phosphate dikinase 1, chloroplastic OS=Z... [more]
PPDK_FLAPR2.670e-7771.70Pyruvate, phosphate dikinase, chloroplastic OS=Fla... [more]
PPDK_FLATR2.260e-7670.75Pyruvate, phosphate dikinase, chloroplastic OS=Fla... [more]
PPDK_FLABI5.035e-7670.28Pyruvate, phosphate dikinase, chloroplastic OS=Fla... [more]
PPDK2_ORYSJ1.791e-7366.67Pyruvate, phosphate dikinase 2 OS=Oryza sativa sub... [more]
PPDK_CLOSY3.176e-5455.94Pyruvate, phosphate dikinase OS=Clostridium symbio... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13F09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13F09-K17-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671876 ID=CX671876; Name=CX671876; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTACTTTCTTTTAGCAATTCTTATATGCAGTTCTTTATAGTAG
TTATTATTTGTATGTGCCGCCTGCGAAGCAAATTATTTACAAATGCAGCG
AGTCAGCTGAAAATATCGTTCACACGGCGACTTGAGCAGCTGCTAGCCTT
GCAATTGGAACCCTGAATGGAGAACATGAAACATAGTCAAGTCCAGCTTC
TGCAAAAAATGCAACTGAAGAAGGCTCTCCCCCATGCTCTCCACATATCC
CCACCTTTAAGCTAGGCCTAGCCGCACGGCCCCTTTCTGTGGCAATCTTG
ATGAGTTGGCCTACGCCTTTCTGATCAAGAACCTGCAAGCAATTGCTTTA
AGTGACTATCCTAGGAATCGAACATTTCTTCCTTCACTTTACCTTCAACT
TGAGAGGGGTATGCCAAACCTCGAATGGGTCACTTTGCAGAATGCCTTTG
GATAGGTATACAGGAAGGAACTTGCCAACGTCATCTCTACTGTACCCGAA
TGTCATTTGTGTTAGGTCATTGGTTCCAAAGGAGAAGAACTCTGCTTCCT
TTGCAATCTCATCTGCCACCAGGGCAGCTCTTGGGATCTCAATCATGGTC
CCGACCTTGTAGTCTAAGGAGGAACCCATCTCGGAGAACACTTTCGTTGC
AACATTCCGTATTAAACTAATTTGATGTCCTAGTTCCTGAGGTGTTCCAA
CAAGGGGAACCATTATCTCTGGAAAAACTTTAAATCTATGGGTGCTCATA
GAAACTGC
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