CX671845

Overview
NameCX671845
Unique NameCX671845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7390 contig Csv1_Contig7390:1148..1911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671845 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  324 YDLTSYDYVNFLCNSNYTVNNIQ-VITRRKADCSGATRAGHVGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSGKIVWSDGKHNVTSPIVV 764
            YD+    YV FLC   Y    +  ++  R   CS         +LNYP++    +   K      F R VTNVG P+S Y  T+R P G+ +TV+P+ L F +  QK +F V V+A   +++PG   + SG +VW   +H+V SPIV+
Sbjct:  601 YDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRS-AKTSTLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFSKASQKRSFKVVVKAK--QMTPG--KIVSGLLVWKSPRHSVRSPIVI 743          
BLAST of CX671845 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.163e-17
Identity = 53/148 (35.81%), Postives = 81/148 (54.73%), Query Frame = -2
Query:  321 YDLTSYDYVNFLCNSNYTVNNIQVITRRKADCSGATRAGHVGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSGKIVWSDGKHNVTSPIVVT 764
            YDLT+ DY+ FLC  NYT   I+ ++RR   C   +++  V +LNYPS +      G +K    + RTVT+VG   +         +G+ ++V+P  L F+   +K ++ V     + K S GS+S   G I WSDGKH V SP+ ++
Sbjct:  616 YDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCD-PSKSYSVADLNYPSFAVNVDGVGAYK----YTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKPS-GSNSF--GSIEWSDGKHVVGSPVAIS 755          
BLAST of CX671845 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.666e-16
Identity = 53/154 (34.42%), Postives = 72/154 (46.75%), Query Frame = -2
Query:  321 YDLTSYDYVNFLCNSNYTVNNIQVITRRKADCSGATRAGHVGNLNYPSL------SAVFQQYGKHKMSTHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSGKIVWSDGKHNVTSPIVVT 764
            YD    DYV FLC   Y    ++ IT   + C+     G V +LNYPS       S  F QY        F RT+T+V    S Y+  I  P G+T++V P  L F  +G + +F + V  +          + S  +VWSDG H V SPI +T
Sbjct:  590 YDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGN-TGRVWDLNYPSFGLSVSPSQTFNQY--------FNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI------KGFVVSASLVWSDGVHYVRSPITIT 728          
The following BLAST results are available for this feature:
BLAST of CX671845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
XSP1_ARATH4.395e-1935.81Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
SUBL_ARATH9.163e-1735.81Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME2.666e-1634.42Cucumisin OS=Cucumis melo PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13E02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13E02-I3-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671845 ID=CX671845; Name=CX671845; organism=Citrus sinensis; type=EST; length=765bp
ATGAAAAAGAGAGACCTTTTTCATTACTCTCGACATTGTCTTAACACACA
CAGGATTTTTTTTTTTACACAACCATTTTTGATTCTTCACCTTACAACAA
AACATATATTAAGATACAAAGTACATCTTCATCCCAAGCTTCTTTTTTTC
ACTCCACCAGCAGCTTTCTGAAATAGAAAACACCCACAAATACATTCTCA
TTATACATTTATATAGACCATAATTAGGAGATGATTCATAATAATCCTAT
ATATTAAGATAGGCAAAATTCCTAAAACCCGAAAATCCCTAGGATACCAA
AACTAGAGAGGTTGCTGCATTGTCACGACTATGGGACTAGTGACATTGTG
CTTCCCATCTGACCATACTATTTTACCACTCTTCATGCTTGAGCTCCCGG
GGGAGAGCTTAACTGCCGTTGCCTCAACTCTAACCAGAAAGTTCAATTTC
TGTCCCACCCGCCTAAACACAAGCTTCTCCGGCTGCACTGTCACTGTCAT
GCCACTGGGTGGCCTGATTGTAACTTTGTAAGCCGAATTAGGATCTCCAA
CATTAGTCACCGTCCTAATGAAATGCGTAGACATCTTATGCTTGCCGTAT
TGTTGAAACACTGCAGACAATGAAGGGTAATTCAAATTCCCAACATGACC
AGCTCTTGTTGCTCCGCTGCAATCTGCTTTTCTCCTAGTGATCACTTGAA
TATTATTAACCGTGTAATTTGAATTGCACAAGAAATTCACATAATCATAT
GAAGTCAAATCATAA
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