EY664509

Overview
NameEY664509
Unique NameEY664509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: HDDC2_HUMAN (HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.308e-37
Identity = 77/149 (51.68%), Postives = 108/149 (72.48%), Query Frame = 2
Query:  293 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKY---ENEPGK 730
            ++ FL L  +LK   R GWV RNV  PES++DHMYRM +M +++ D   +++D+C+++A+VHD+AE IVGDI P+D IPKEEK +RE EA+  + +LL E  R +E+ ELW EYE  S+AEAK VK  D+ EMILQA +Y   E++PG+
Sbjct:   17 LLQFLRLVGQLKRVPRTGWVYRNVQRPESVSDHMYRMAVMAMVIKD-DRLNKDRCVRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLEHKPGR 163          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: HDDC2_BOVIN (HD domain-containing protein 2 OS=Bos taurus GN=HDDC2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.417e-36
Identity = 76/149 (51.01%), Postives = 107/149 (71.81%), Query Frame = 2
Query:  293 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKY---ENEPGK 730
            ++ FL L  +LK   R GWV RNV  PES++DHMYRM +M L+  D   +++D+C+++A+VHD+AE IVGDI P+D +P+EEK +RE EA+  + +LL E  + +E+ ELW EYE  S+AEAK VK  D+ EMILQA +Y   EN+PG+
Sbjct:   18 LLQFLRLVGQLKRVPRTGWVYRNVQKPESVSDHMYRMAVMALVTKD-EHLNKDRCVRLALVHDMAECIVGDIAPADNVPREEKHRREEEAMKQLTQLLPEDLQ-KELYELWEEYETQSSAEAKFVKQLDQCEMILQASEYEDLENKPGR 164          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: HDDC2_MOUSE (HD domain-containing protein 2 OS=Mus musculus GN=Hddc2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.851e-36
Identity = 78/149 (52.35%), Postives = 106/149 (71.14%), Query Frame = 2
Query:  293 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKY---ENEPGK 730
            ++ FL L  +LK   R GWV RNV  PES++DHMYRM +M ++  D   +++D+CI++A+VHD+AE IVGDI P+D IPKEEK +RE EA+  + +LL E  R +E+ ELW EYE  S+ EAK VK  D+ EMILQA +Y   EN+PG+
Sbjct:   12 LLRFLRLVGQLKRVPRTGWVYRNVEKPESVSDHMYRMAVMAMVTRD-DRLNKDRCIRLALVHDMAECIVGDIAPADNIPKEEKHRREEEAMKQITQLLPEDLR-KELYELWEEYETQSSEEAKFVKQLDQCEMILQASEYEDLENKPGR 158          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: HDDC2_DANRE (HD domain-containing protein 2 OS=Danio rerio GN=hddc2 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 70/146 (47.95%), Postives = 103/146 (70.55%), Query Frame = 2
Query:  293 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKYENEPGK 730
            ++ F+ L  +LK   R GWV RN+  PES++DHMYRM +M L + DI  +++++C+K+A+VHD+AE IVGDI P+D + K EK +RE++A+ ++  LL +  R +EI  LW EYE  S+ EAK+VK+ D  EMI+QA +YE   GK
Sbjct:    4 MLQFMKLVGQLKRVPRTGWVYRNIKQPESVSDHMYRMSMMALTIQDI-SVNKERCMKLALVHDLAECIVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLR-KEIYNLWEEYETQSSPEAKLVKELDNLEMIIQAHEYEELEGK 147          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: HDDC2_DICDI (HD domain-containing protein 2 homolog OS=Dictyostelium discoideum GN=hddc2 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.748e-34
Identity = 77/150 (51.33%), Postives = 97/150 (64.67%), Query Frame = 2
Query:  296 IDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMG-------LIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKYENEP 724
            ++F  +C +LKT KR GWV   V  PES++DHMYRM +MG       LI  D   ID+ K IKMA+VHD+ E++VGD TP D I KEEK Q E+ AI  +   L      +EI +LW EYE+  T EA +VKDFDK EMILQA +YE +P
Sbjct:    5 LEFFKICGKLKTLKRTGWVNHGVELPESVSDHMYRMAMMGMCLDKKELIGEDGKEIDKMKIIKMALVHDLGESLVGDFTPHDKITKEEKYQLEKNAIIEITNTLSGEV-GKEIFDLWQEYEDCKTNEALLVKDFDKFEMILQAYEYEKQP 153          

HSP 2 Score: 20.7866 bits (42), Expect = 1.748e-34
Identity = 9/23 (39.13%), Postives = 13/23 (56.52%), Query Frame = 3
Query:  738 EEFFQSTAGKVQTGIGKSLGCKI 806
            + FF ST GK    + KSL  ++
Sbjct:  163 QSFFDSTRGKFHHPLFKSLALQL 185          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: YC0H_SCHPO (HD domain-containing protein C4G3.17 OS=Schizosaccharomyces pombe GN=SPCC4G3.17 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.263e-34
Identity = 74/146 (50.68%), Postives = 100/146 (68.49%), Query Frame = 2
Query:  293 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREA---ITYMCKLLGERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKYENE 721
            ++ FL    RLKTT R GW+   +  PESIADHMYRMG++ ++  D P I++++C+K+A+VHD+AE+IVGDITP + + KEEK + E EA   IT     L    +A+EI EL++EYE  ST EAK VKD DK EMI Q  +YE +
Sbjct:    9 IVPFLDCLSRLKTTPRTGWLYHGIEKPESIADHMYRMGILTMLCND-PSINKERCLKIAVVHDMAESIVGDITPHENVSKEEKHRMESEAMVSITQQLIPLNLSLQAEEIKELFLEYESASTPEAKFVKDIDKFEMIAQMFEYERK 153          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: HDDC2_XENLA (HD domain-containing protein 2 OS=Xenopus laevis GN=hddc2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33
Identity = 69/149 (46.31%), Postives = 104/149 (69.80%), Query Frame = 2
Query:  293 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLLGERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKY---ENEPGK 730
            ++ F+ L  +LK   R GW+ R V  PES++DHMYRM +M ++  D   +++D+CI++A+VHD+AE IVGDI P+D I KEEK ++E+ A+ ++ +LL +  +  E+ +LW EYE   TAEAK VK+ D+ EMILQA++Y   E  PG+
Sbjct:   14 LLQFMKLVGQLKRVPRTGWIYRQVEKPESVSDHMYRMAVMAMLTEDRK-LNKDRCIRLALVHDMAECIVGDIAPADNIAKEEKHRKEKAAMEHLTQLLPDNLKT-EVYDLWEEYEHQFTAEAKFVKELDQCEMILQALEYEELEKRPGR 160          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: YGK1_YEAST (HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae GN=YGL101W PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.216e-31
Identity = 64/143 (44.76%), Postives = 99/143 (69.23%), Query Frame = 2
Query:  302 FLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL---GERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKYENE 721
            FL++   LKT +R GWV   ++  ESI+DHMYRMGL  +++ D   +DR+KCI++A+VHD AE++VGDITP+D + KEEK +RE E + Y+C+ +      + ++EI + W+ YE+ +  E + VKD DK EM++Q  +YE +
Sbjct:   32 FLNIIQLLKTQRRTGWVDHGIDPCESISDHMYRMGLTTMLITD-KNVDRNKCIRIALVHDFAESLVGDITPNDPMTKEEKHRREFETVKYLCESIIRPCSESASREILDDWLAYEKQTCLEGRYVKDIDKYEMLVQCFEYEQK 173          
BLAST of EY664509 vs. ExPASy Swiss-Prot
Match: YB92_YEAST (HD domain-containing protein YBR242W OS=Saccharomyces cerevisiae GN=YBR242W PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.678e-29
Identity = 64/146 (43.84%), Postives = 99/146 (67.81%), Query Frame = 2
Query:  293 VIDFLSLCHRLKTTKRAGWVKRNVNNPESIADHMYRMGLMGLIMADIPGIDRDKCIKMAIVHDIAEAIVGDITPSDGIPKEEKSQREREAITYMCKLL---GERARAQEIDELWMEYEENSTAEAKIVKDFDKAEMILQAVKYENE 721
            ++ FL++  +LK  +R G++   +   ESI+DHMYR+ ++ +++ D   ++RDKC+++A+VHDIAE++VGDITP D I KEEK +RE E I Y+C  L        A+EI + W+ YE  ++ EA+ VKD DK EM++Q  +YE E
Sbjct:   48 ILAFLNVVQQLKIQRRTGYLDLGIKECESISDHMYRLSIITMLIKD-SRVNRDKCVRIALVHDIAESLVGDITPVDPIGKEEKHRREWETIKYLCNALIKPYNEIAAKEIMDDWLAYENVTSLEARYVKDIDKYEMLVQCFEYERE 192          
The following BLAST results are available for this feature:
BLAST of EY664509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
HDDC2_HUMAN8.308e-3751.68HD domain-containing protein 2 OS=Homo sapiens GN=... [more]
HDDC2_BOVIN1.417e-3651.01HD domain-containing protein 2 OS=Bos taurus GN=HD... [more]
HDDC2_MOUSE1.851e-3652.35HD domain-containing protein 2 OS=Mus musculus GN=... [more]
HDDC2_DANRE1.326e-3447.95HD domain-containing protein 2 OS=Danio rerio GN=h... [more]
HDDC2_DICDI1.748e-3451.33HD domain-containing protein 2 homolog OS=Dictyost... [more]
YC0H_SCHPO2.263e-3450.68HD domain-containing protein C4G3.17 OS=Schizosacc... [more]
HDDC2_XENLA1.123e-3346.31HD domain-containing protein 2 OS=Xenopus laevis G... [more]
YGK1_YEAST5.216e-3144.76HD domain-containing protein YGL101W OS=Saccharomy... [more]
YB92_YEAST1.678e-2943.84HD domain-containing protein YBR242W OS=Saccharomy... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-067-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664509 ID=EY664509; Name=EY664509; organism=Citrus sinensis; type=EST; length=932bp
CCACGCGTCCGAGCACGTACATTTACGAAATGATAAAAAAGATAAAGCCG
AAGAAATGGGAAGCGGAAGCCGTGGACTGTTGCTCTGTAAATCATCGTCG
TCACTCGTGTTCTTAATACCTTCATTCACTTGCAATAATCTCAGATTCAA
CAAAACAATCGCCAGTTCCAGAGCTCATCGAATGGCCACGGAAGCTTCGT
CGTCATCCTCATCCGTCACCGGCGGTGACAGCATCAATCCTCTCGCTTCC
TCATCTGTTAACGGCGCTGCTTTCTCTTCTTCCTCTTCGTCCGTGATCGA
CTTCCTCTCCCTCTGCCACCGCCTCAAAACAACGAAGAGAGCAGGATGGG
TAAAGAGAAATGTTAACAATCCAGAATCGATAGCTGATCATATGTACAGA
ATGGGATTGATGGGTCTCATTATGGCTGACATTCCTGGCATTGACCGAGA
CAAGTGCATTAAGATGGCAATTGTTCATGACATTGCGGAAGCTATTGTTG
GGGACATTACCCCTTCAGATGGAATTCCAAAGGAAGAAAAGAGTCAACGA
GAGCGAGAAGCTATAACCTACATGTGCAAACTATTAGGAGAAAGGGCAAG
AGCCCAGGAAATAGATGAGTTGTGGATGGAGTATGAAGAAAATTCTACTG
CAGAGGCCAAAATAGTCAAGGACTTTGACAAGGCGGAGATGATACTTCAA
GCGGTAAAGTACGAAAATGAGCCAGGGAAAGGATTGGGAGGAGTTTTTCC
AGTCAACTGCTGGAAAAGTTCAAACTGGAATTGGGAAAAGCTTGGGCTGC
AAAATTTGTTTCAAGGAAAAAAAAGGAACTTATTTTCATAAGAGGGCCCT
TAAGTGAAATTTTCAAAAAAGTTTTGACTTGGTCATGGTACCCGAGGGGC
AATCCCTGGCCCGAATTTTTCCCCCGATTCAA
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