CX671772

Overview
NameCX671772
Unique NameCX671772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671772 vs. ExPASy Swiss-Prot
Match: YCV6_SCHPO (Putative hydrolase C777.06c OS=Schizosaccharomyces pombe GN=SPCC777.06c PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16
Identity = 54/186 (29.03%), Postives = 97/186 (52.15%), Query Frame = -2 
Query:  306 WTNN-VQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKI--TPLPVWHGA---------GYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDG 818
            WT   +Q  + IY+  R ++V++++  Y+V+      G +V    F++   ++PF + D+ I  TPLPV HG           Y  +GFR G++ YISD + +P  T   ++   ++++DAL+ +   S HF   +A E +  ++  P R L+ G  H ++H +  +EL  L     +  + +YDG
Sbjct:  114 WTLGFLQPSVKIYLTERTYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSPDKPFKLDDIDISVTPLPVHHGVYFIEGKESQTYFCMGFRVGDMSYISDCNYVPPTTKKLMEGSNVVVVDALKHEPYPS-HFSFKQAEEFIASLEHVPSRVLYTGFSHKVEHNETVKELSVLK----VPTEPAYDG 294
The following BLAST results are available for this feature:
BLAST of CX671772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCV6_SCHPO6.633e-1629.03Putative hydrolase C777.06c OS=Schizosaccharomyces... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13A12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A12-A23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671772 ID=CX671772; Name=CX671772; organism=Citrus sinensis; type=EST; length=819bp
TTTTGGAAAAATCGGGCACTAGTCCAATACATAAAATAATAATGTTATGT
CACATTTAGAATTCAGCAGTACTAAATGAGGCCAATGAAACTTCCTGGAA
AGATTACATCATATGAGTTTGTGATGAGTTGGTCAAGATAATAATTGACT
TGGAATTTGGAGTTTATGGTGTATGTTTTGTTGTTAAAAAATAGTGGCTG
TGCCCAAAAATACATGATAAAGGCTACAGCATGTTTGGTATATGCAGTCT
ATTAATCCCCACATTGAAAACAAGGTAAGAGCTAGAGCATTACTGGAACA
CGCAATCCATCATAACTGAGTTGCACATCAAGACCCTCAGTCTCCATCAA
CTTCAGAAGTTCTTCATTCACCTTTTCATGATCCATCAAATGCATCATGC
CAATGAAAAGTGTTCTCTTTGGTTGAATTTTCCGCACTTCCTCTAAAGCC
CTTGGAAGTCCAAAGTGTGTTGAAGAAGACCGATCAGGCCTTAAAGCATC
CATTATCAGGATTTCACAGTCTTGCAGAAAGGGATAAGTTTCTTCAGGTA
TCTCACTGACATCACTGATGTAACAAATATTACCAAAACGAAATCCAAGG
GAACGGTAACCAGCACCATGCCACACTGGTAAAGGTGTAATCTTTAAATC
TTGTACAGTGAATGGCTCCTCATCAATGATATTAAATTGCAGCTCTGAAA
CTGCAGCACCAGGTATAATCCCGCTTGTATCCACTAAATAATAATGAGTC
TTCTTCATTACCTCAAAATCACGCATTGCAACGTAAATTGGAATGTGACG
CTGTACATTGTTCGTCCAG
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