EY650305

Overview
NameEY650305
Unique NameEY650305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8331 contig Csv1_Contig8331:651..1385. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM11_CUCSA (Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.545e-58
Identity = 111/128 (86.72%), Postives = 119/128 (92.97%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 414
            K M AQ+II+EESKQF AWRDSLETVPTIKKLRAYAERIR AEL+KCLSKMGDDI KKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTL ETLENMHALNRMF LET+ ++ EQK+RAK+EQNQK
Sbjct:  425 KAMEAQSIITEESKQFEAWRDSLETVPTIKKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM11_ARATH (Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.266e-52
Identity = 103/128 (80.47%), Postives = 113/128 (88.28%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 414
            K M AQ II+EES QF AWRDSLETVPTIKKLRAYAERIRVAEL+KC+SKMGDDI+KKT RAVDDLSRGIVN+ LHGPMQHLRCDGSDSRTL ETLENMHALNRM+GLE D  + E+K++A  EQ QK
Sbjct:  418 KAMEAQTIITEESTQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCMSKMGDDINKKTTRAVDDLSRGIVNRFLHGPMQHLRCDGSDSRTLSETLENMHALNRMYGLEKD--ILEEKLKAMAEQQQK 543          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM12_HORVU (Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.712e-49
Identity = 92/128 (71.88%), Postives = 116/128 (90.62%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 411
            K M AQAII++E K+F AWRDSLETVPTIKKLR+YA+RIR +ELDKCL K+G+D ++KKTRR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETL+NMHALNRMF L+T+ ++ EQK++AK+E+ Q
Sbjct:  337 KAMEAQAIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELDKCLQKIGEDNLNKKTRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLDNMHALNRMFNLDTEKAVLEQKIKAKVEKTQ 464          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM12_CUCSA (Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49
Identity = 93/128 (72.66%), Postives = 108/128 (84.38%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 414
            K   AQ+II EE  +F AWRDSLETVPTIKK RAY ERIR AELDKCLSKMG+DI KK + A++DLS GI NKLLHGP+QHLRCDG+DSRTLDE L+NMHA+NRMF LETD S+ E+K+RAK+E+ QK
Sbjct:  415 KVQEAQSIIGEEINKFEAWRDSLETVPTIKKFRAYVERIRAAELDKCLSKMGEDIPKKKKVAINDLSLGIANKLLHGPIQHLRCDGNDSRTLDEILQNMHAINRMFDLETDLSVLEEKIRAKVERGQK 542          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSJ (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.893e-48
Identity = 90/128 (70.31%), Postives = 115/128 (89.84%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 411
            K M AQ II++E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E++Q
Sbjct:  409 KAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDALTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKSQ 536          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSI (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.893e-48
Identity = 90/128 (70.31%), Postives = 115/128 (89.84%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 411
            K M AQ II++E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E++Q
Sbjct:  409 KAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDSLTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKSQ 536          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM11_HORVU (Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48
Identity = 90/128 (70.31%), Postives = 114/128 (89.06%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 411
            K M AQ II++E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDGSDSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E+ Q
Sbjct:  399 KAMEAQTIITQELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDNLNKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAVLEQKIKAKVEKTQ 526          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM13_HORVU (Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.602e-47
Identity = 87/128 (67.97%), Postives = 113/128 (88.28%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 411
            K M AQ IISEE K+F AWRDS+ETVPTIKKLR+YA+R+R +ELDKCL K+G+D ++KK RR+++ LS GIVN+LLHGP+QHLRCDG+D+RTLDETLENMHALNRMFGL+T+ ++ EQK++ K+E+ +
Sbjct:  405 KAMEAQTIISEELKRFEAWRDSMETVPTIKKLRSYADRVRASELDKCLQKIGEDALTKKMRRSIEQLSTGIVNRLLHGPLQHLRCDGTDNRTLDETLENMHALNRMFGLDTEKAVMEQKIKTKVEKQK 532          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM12_ARATH (Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.442e-45
Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = 1
Query:   31 KTMGAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQ 405
            K M AQAII++ESK F AWRDSLETVPTIKKLR Y ERI  AE++K L KMG D++KK R+ VDDL RGIVNKLLHGPMQHLRCDG+DSRTL ETL+NM ALNRM+GL  D  + E+K+RAK+E+
Sbjct:  407 KAMDAQAIITDESKHFEAWRDSLETVPTIKKLRGYTERIIAAEIEKSLPKMGIDMNKKMRKTVDDLIRGIVNKLLHGPMQHLRCDGNDSRTLSETLDNMQALNRMYGL--DAEILEEKIRAKVEK 529          
BLAST of EY650305 vs. ExPASy Swiss-Prot
Match: HEM1_SYNS9 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain CC9902) GN=hemA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17
Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 1
Query:   43 AQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLE 357
            A+ ++ +E++QF  W DSLE VPTI +LR+  E IR  EL K LS+MG D S + R+ V+ LS+GI+NK+LH P+  LR     S+   E  + + A+ R+F L+
Sbjct:  330 AEHLLQDEAQQFLDWWDSLEAVPTINQLRSSMETIRTEELQKALSRMGPDFSARERKVVEALSKGIINKILHTPVTKLRA----SQARSERQQALRAVERLFDLD 430          
The following BLAST results are available for this feature:
BLAST of EY650305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
HEM11_CUCSA1.545e-5886.72Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumi... [more]
HEM11_ARATH1.266e-5280.47Glutamyl-tRNA reductase 1, chloroplastic OS=Arabid... [more]
HEM12_HORVU1.712e-4971.88Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vu... [more]
HEM12_CUCSA4.980e-4972.66Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumi... [more]
HEM1_ORYSJ1.893e-4870.31Glutamyl-tRNA reductase, chloroplastic OS=Oryza sa... [more]
HEM1_ORYSI1.893e-4870.31Glutamyl-tRNA reductase, chloroplastic OS=Oryza sa... [more]
HEM11_HORVU3.228e-4870.31Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeu... [more]
HEM13_HORVU1.602e-4767.97Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeu... [more]
HEM12_ARATH7.442e-4571.20Glutamyl-tRNA reductase 2, chloroplastic OS=Arabid... [more]
HEM1_SYNS91.013e-1743.81Glutamyl-tRNA reductase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-E12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650305 ID=EY650305; Name=EY650305; organism=Citrus sinensis; type=EST; length=735bp
CCACGCGTCCGCGGACGCGTGGGGGCTCCGAAAACAATGGGAGCTCAGGC
TATTATTTCTGAGGAATCAAAACAGTTTGCAGCTTGGAGGGATTCATTGG
AGACTGTTCCTACTATTAAGAAATTGAGAGCTTATGCTGAGAGAATCAGG
GTGGCAGAGTTAGATAAATGCCTATCAAAGATGGGTGATGATATCTCAAA
GAAAACAAGGAGGGCTGTCGATGACCTTAGCCGTGGTATCGTGAATAAGC
TTCTTCATGGTCCAATGCAGCACTTGAGATGTGATGGGAGTGACAGCAGG
ACTCTAGACGAGACCCTTGAGAACATGCATGCTCTAAACAGAATGTTTGG
CCTTGAAACAGATACATCTCTTTTCGAGCAAAAGGTTCGAGCCAAGATAG
AACAAAACCAGAAGTGAGCTTTTTGAATACCAGTTTGTCAATGGCACTTC
ATTCACTTCCTCAATTGAATAAGAGGAAAACGTCCTCACCTTGTTGTGAG
TCTCGGCATTGCTGTATTCTTCATTTGAATAGTATAACAGTGTAGATCCC
TATGTGGGATCATTCAATTCGTCAAGTGTTGTTATAAGACACTTTTTTCC
TAACTCTCATTTGGGTGCCTTCCAACCTCCTNAGATAGAGGTGAGCCTGA
TCCTTGTACCGATGAAACCACTATAAATCCATGGTATTAATGTACTTCAT
TATATAGAGACACGCTTGTGTAAAAAAAAAAAAAA
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