EY664485

Overview
NameEY664485
Unique NameEY664485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10009 contig Csv1_Contig10009:1300..1977. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664485 vs. ExPASy Swiss-Prot
Match: KPPR_ARATH (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.169e-62
Identity = 113/127 (88.98%), Postives = 120/127 (94.49%), Query Frame = 1
Query:   19 VKYFTPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEAKA 399
            VKYF+PVYLFDEGSTI WIPCGRKLTCSYPGIKF+Y PD+YF HEVS+LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQ+I +KA A  EAKA
Sbjct:  269 VKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFNYEPDSYFDHEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQLIANKATARAEAKA 395          
BLAST of EY664485 vs. ExPASy Swiss-Prot
Match: KPPR_WHEAT (Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.605e-62
Identity = 111/125 (88.80%), Postives = 116/125 (92.80%), Query Frame = 1
Query:   19 VKYFTPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEA 393
            +K+F PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGPD YFG EVS+LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQII  +A  P EA
Sbjct:  277 IKFFNPVYLFDEGSTINWIPCGRKLTCSYPGIKFSYGPDTYFGQEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIIAERAGVPAEA 401          
BLAST of EY664485 vs. ExPASy Swiss-Prot
Match: KPPR_MESCR (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.438e-60
Identity = 108/125 (86.40%), Postives = 117/125 (93.60%), Query Frame = 1
Query:   19 VKYFTPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEA 393
            V+YF+PVYLFDEGS+I WIPCGRKLTCSYPGIKF YGPD YFG+EV++LEMDG+FDRLDELIYVESHLSNLSTKFYGEVTQQMLKH DFPGSNNGTGLFQTIVGLKIRDL+EQ+I SK AAP  A
Sbjct:  270 VQYFSPVYLFDEGSSITWIPCGRKLTCSYPGIKFFYGPDTYFGNEVTVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQDFPGSNNGTGLFQTIVGLKIRDLFEQLIASKTAAPAAA 394          
BLAST of EY664485 vs. ExPASy Swiss-Prot
Match: KPPR_SPIOL (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.295e-57
Identity = 100/125 (80.00%), Postives = 114/125 (91.20%), Query Frame = 1
Query:   19 VKYFTPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPVEA 393
            VK+F PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGPD ++G+EV+++EMDG FDRLDELIYVESHLSNLSTKFYGEVTQQMLKH +FPGSNNGTG FQTI+GLKIRDL+EQ++ S++ A   A
Sbjct:  275 VKFFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFSYGPDTFYGNEVTVVEMDGMFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQNFPGSNNGTGFFQTIIGLKIRDLFEQLVASRSTATATA 399          
BLAST of EY664485 vs. ExPASy Swiss-Prot
Match: KPPR_CHLRE (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii GN=PRKA PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.027e-50
Identity = 92/122 (75.41%), Postives = 107/122 (87.70%), Query Frame = 1
Query:   22 KYFTPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAPV 387
            K F PVYLFDEGSTI WIPCGRKLTCS+PGIK  YGPD ++G EVS+LEMDG+FD+L+ELIYVESHLSN S KFYGE+TQQMLK++ FPGSNNGTGLFQTIVGLK+R++YE+I+  K   PV
Sbjct:  255 KMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMFYGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNGTGLFQTIVGLKVREVYERIV-KKDVVPV 375          
BLAST of EY664485 vs. ExPASy Swiss-Prot
Match: KPPR_SYNY3 (Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803) GN=prk PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.419e-45
Identity = 78/122 (63.93%), Postives = 104/122 (85.25%), Query Frame = 1
Query:   19 VKYFTPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSILEMDGKFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIITSKAAAP 384
            VK+F P YLFDEGSTI+W PCGRKLTC+YPGIK  YGPD + G+EVS+LE+DG+F+ L+E++YVE+HLS   TK+YGE+T+ +LKH D+PG++NGTGLFQ +VGLK+R +YEQ +T++A  P
Sbjct:  209 VKFFEPAYLFDEGSTIDWRPCGRKLTCTYPGIKMYYGPDNFMGNEVSLLEVDGRFENLEEMVYVENHLSKTGTKYYGEMTELLLKHKDYPGTDNGTGLFQVLVGLKMRKVYEQ-LTAEAKVP 329          
The following BLAST results are available for this feature:
BLAST of EY664485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
KPPR_ARATH1.169e-6288.98Phosphoribulokinase, chloroplastic OS=Arabidopsis ... [more]
KPPR_WHEAT2.605e-6288.80Phosphoribulokinase, chloroplastic OS=Triticum aes... [more]
KPPR_MESCR2.438e-6086.40Phosphoribulokinase, chloroplastic OS=Mesembryanth... [more]
KPPR_SPIOL3.295e-5780.00Phosphoribulokinase, chloroplastic OS=Spinacia ole... [more]
KPPR_CHLRE1.027e-5075.41Phosphoribulokinase, chloroplastic OS=Chlamydomona... [more]
KPPR_SYNY38.419e-4563.93Phosphoribulokinase OS=Synechocystis sp. (strain P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-067-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664485 ID=EY664485; Name=EY664485; organism=Citrus sinensis; type=EST; length=678bp
TTCTCGACCCCGCGTCCGGTGAAGTACTTCACCCCGGTTTATCTGTTTGA
TGAAGGATCAACTATCGAATGGATACCTTGCGGAAGGAAGCTTACATGTT
CTTACCCCGGCATCAAATTCTCTTATGGCCCTGACGCTTACTTTGGCCAT
GAGGTCTCGATTTTGGAAATGGATGGGAAATTTGACAGGTTAGATGAGCT
AATTTATGTCGAAAGCCATCTAAGCAACTTATCAACCAAGTTCTATGGAG
AAGTCACCCAGCAAATGTTGAAGCATGCCGATTTCCCTGGCAGCAACAAC
GGAACCGGTCTCTTCCAAACTATAGTTGGATTAAAGATTAGGGATCTCTA
CGAACAAATCATCACCAGCAAGGCTGCGGCTCCGGTAGAAGCGAAAGCTT
AAACACTGCCTTGTAATATTAAACAAGGCAACACAGATAAGTTGCCAAAA
ATCCATCTATTCTTTTCCGAGTCCCTTTTCTTGTTTCAGTTGAGTGCTAG
GCCAGCATTTTCCTCTTAAGATACTCCTATGTATGTATTTATTTCATGGT
GTAATCTATGAACACTTTGTTAATAAACTCATATAAAAATGCAAAAGCAG
AGATGAAATTCAAATCAGAAGTGCTCATAGGCATTAAGTTTGGAGCGTCC
TTCGAAAAAAAAAAAAAAAAAGGGNCCG
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