CX671694

Overview
NameCX671694
Unique NameCX671694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8090 contig Csv1_Contig8090:388..1197. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671694 vs. ExPASy Swiss-Prot
Match: MA2B1_BOVIN (Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 62.7734 bits (151), Expect = 2.676e-15
Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = -1
Query:  194 GLTVRGNYYLSVNQLG-AGARWRRTTGQEVYSP-LLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDA--EYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFL 703
            GL VRG + + +++   A AR R     EV +P ++LA          ++  T+ + +  +  LP +V L+TL      ++LLRL H +  GED+    S+   ++L  +F   +I  L+E +L+ANQ      ++ W    ++G T  P    P+ A+   + L PMEIRTFL
Sbjct:  824 GLWVRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGGGARYRLEKAPRTQFSGLRRE--LPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETTLAANQLLAYASRLQWTT--DTGPTPHPSPSRPVSAT---ITLQPMEIRTFL 990          

HSP 2 Score: 40.0466 bits (92), Expect = 2.676e-15
Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = -3
Query:  732 DGQVEIMLHRRMLADDGRGVGEALDE 809
            DG +E+M+HRR+L DD RGVGE L++
Sbjct:  795 DGSLELMVHRRLLKDDARGVGEPLNK 820          
BLAST of CX671694 vs. ExPASy Swiss-Prot
Match: MA2B1_HUMAN (Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN2B1 PE=1 SV=3)

HSP 1 Score: 55.8398 bits (133), Expect = 2.286e-13
Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = -1
Query:  194 GLTVRGNYYLSVNQLGAGARWRRTTG-QEVYSP-LLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKV--ELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFL 703
            G  VRG + + ++   A A   R    QEV +P ++LA              T+ + +  D  LP +V L+TL       VLLRL H +  GED+  +  A V   L+ +F   +I +L+E +L ANQ +    ++ W          +P +   LD + + +E  PMEIRTFL
Sbjct:  835 GAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGLRRD--LPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRLQETTLVANQLREAASRLKWTTNTGPTPHQTPYQ---LDPANITLE--PMEIRTFL 1001          

HSP 2 Score: 40.4318 bits (93), Expect = 2.286e-13
Identity = 17/27 (62.96%), Postives = 22/27 (81.48%), Query Frame = -3
Query:  729 DGQVEIMLHRRMLADDGRGVGEALDES 809
            DG +E+M+HRR+L DDGRGV E L E+
Sbjct:  806 DGSLELMVHRRLLKDDGRGVSEPLMEN 832          
BLAST of CX671694 vs. ExPASy Swiss-Prot
Match: MA2B1_MOUSE (Lysosomal alpha-mannosidase OS=Mus musculus GN=Man2b1 PE=2 SV=3)

HSP 1 Score: 54.6842 bits (130), Expect = 3.116e-12
Identity = 53/178 (29.78%), Postives = 79/178 (44.38%), Query Frame = -1
Query:  194 GLTVRGNYYLSVNQLG-AGARWRRTTGQEVYSPLLLAFTQEKLETWTESHLTKSTAMESDYS-----LPLNVALITLEELDDGSVLLRLAHLY--EEGEDAEYSTLAKVELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFL 703
            G  VRG + + ++ +  A AR R    QEV +P      Q  L     S        ++ +S     LP  V L+TL       +LLRL H +  +E  D   S+   + ++ +F+  +I  L+E +L+ANQ      ++ W     +G T  P    P       V L PMEIRTFL
Sbjct:  836 GDKVRGRHLVLLSSVSDAAARHRLLAEQEVLAP------QVVLSLGGSSPYHSRATPKTQFSGLRQELPPQVHLLTLARWGPKMLLLRLEHQFALKEDSDRNLSSPVTLNVQNLFQTFTINYLQETTLAANQPLSRASRLKWMT--NTGPTSFP---EPSKLDPTSVTLKPMEIRTFL 1002          

HSP 2 Score: 37.7354 bits (86), Expect = 3.116e-12
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = -3
Query:  729 DGQVEIMLHRRMLADDGRGVGEALDES 809
            DG +E+M+HRR+L DD RGV E L E+
Sbjct:  807 DGSLELMVHRRLLVDDDRGVSEPLLET 833          
BLAST of CX671694 vs. ExPASy Swiss-Prot
Match: MA2B1_MACFA (Lysosomal alpha-mannosidase OS=Macaca fascicularis GN=MAN2B1 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 1.149e-11
Identity = 52/174 (29.89%), Postives = 83/174 (47.70%), Query Frame = -1
Query:  194 GLTVRGNYYLSVNQLGAGARWRRTTG-QEVYSP-LLLAFTQEKLETWTESHLTKSTAMESDYSLPLNVALITLEELDDGSVLLRLAHLYEEGEDAEYSTLAKV--ELKKMFKGKSIKQLKEMSLSANQEKLEMKKMTWKVEGESGKTHSPVRGGPLDASTLVVELGPMEIRTFL 703
            G  VRG + + ++   A A   R    QEV +P ++LA              T+ + +  +  LP +V L+TL       +LLRL H +  GED+  +  A V   L+ +F   +I +L+E +L ANQ +    ++ W          +P +   LD + + +E  PMEIRTFL
Sbjct:  836 GAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQVVLAPGGGAAYNLGAPPRTQFSGLRRE--LPPSVHLLTLASWGPEMLLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRLQETTLVANQLREAASRLKWTTNTGPTPHQTPYQ---LDPANITLE--PMEIRTFL 1002          

HSP 2 Score: 37.3502 bits (85), Expect = 1.149e-11
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = -3
Query:  729 DGQVEIMLHRRMLADDGRGVGEALDES 809
            DG +E+M+HRR+L DD RGV E L E+
Sbjct:  807 DGSLELMVHRRLLKDDERGVSEPLMEN 833          
The following BLAST results are available for this feature:
BLAST of CX671694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MA2B1_BOVIN2.676e-1531.03Lysosomal alpha-mannosidase OS=Bos taurus GN=MAN2B... [more]
MA2B1_HUMAN2.286e-1331.03Lysosomal alpha-mannosidase OS=Homo sapiens GN=MAN... [more]
MA2B1_MOUSE3.116e-1229.78Lysosomal alpha-mannosidase OS=Mus musculus GN=Man... [more]
MA2B1_MACFA1.149e-1129.89Lysosomal alpha-mannosidase OS=Macaca fascicularis... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12F02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F02-L4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671694 ID=CX671694; Name=CX671694; organism=Citrus sinensis; type=EST; length=811bp
ACCGCGGCCCCCCCTTTTTTTATTCCATTATTTTAATGCATAAGATATTC
CAAATCGAAGCTCTGAATAAACATACAGAAGCTGATGAGTCATGAATGGG
AAAAACTTCCCCACTTGAAAGATATTACAATTATTATCAATTTTTTTTTA
AAAGATAAGTTTAATTACACAGAAAACCTCATCAAAATTTCAACAAGAAA
GTGCGAATCTCCATAGGACCAAGCTCAACAACAAGAGTTGAGGCATCAAG
AGGGCCACCTCTAACAGGGGAATGTGTTTTGCCACTTTCTCCTTCAACTT
TCCACGTCATTTTCTTCATCTCCAATTTTTCCTGGTTTGCTGATAAGCTC
ATTTCCTTCAGCTGCTTTATTGATTTGCCCTTGAACATTTTCTTCAGTTC
GACTTTGGCTAGAGTTGAGTACTCGGCATCTTCACCCTCCTCGTACAGAT
GTGCCAGTCGCAGAAGAACACTTCCATCATCCAACTCCTCAAGAGTAATT
AAAGCAACATTGAGAGGCAGGCTGTAGTCTGATTCCATGGCAGTTGATTT
TGTCAGATGAGATTCTGTCCAAGTCTCTAACTTTTCTTGTGTGAAAGCCA
AGAGAAGCGGTGAATAAACTTCTTGGCCAGTTGTTCGCCGCCAGCGTGCT
CCAGCCCCTAGTTGATTGACGCTCAAATAATAATTTCCTCTAACCGTTAG
TCCTTTCACAATTATCTTGAACACAAACACTTTCATCAAGGGCTTCTCCA
ACTCCCCTGCCATCATCAGCAAGCATACGCCTATGAAGCATTATCTCTAC
TTGTCCATCTT
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